Cow genome map


           Conread name:
           Ss1.1-rcbr0_006154.5
        

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               19, 14
               

               Conread position:
               1-177
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               24, 60
               

               Conread position:
               1-209
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               26, 17
               

               Conread position:
               1-209
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               19, 14
               

               Conread position:
               1-231
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               20, 9
               

               Conread position:
               1-232
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               23, 175
               

               Conread position:
               1-232
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               19, 14
               

               Conread position:
               1-232
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               99, 23
               

               Conread position:
               1-233
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               24, 141
               

               Conread position:
               1-234
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               24, 60
               

               Conread position:
               1-234
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               24, 17
               

               Conread position:
               1-234
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               19, 14
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               24, 152
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               19, 14
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               14, 90
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               23, 58
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               98, 156
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               18, 14
               

               Conread position:
               1-242
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               66, 77
               

               Conread position:
               1-242
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               24, 48
               

               Conread position:
               1-242
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               26, 105
               

               Conread position:
               1-242
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               20, 14
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               24, 75
               

               Conread position:
               1-250
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               22, 146
               

               Conread position:
               1-252
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               24, 68
               

               Conread position:
               1-263
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               20, 14
               

               Conread position:
               1-266
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               20, 14
               

               Conread position:
               2-234
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               23, 57
               

               Conread position:
               2-241
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               196
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               18, 13
               

               Conread position:
               4-232
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               30, 57
               

               Conread position:
               4-241
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               21, 168
               

               Conread position:
               4-241
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               16, 27
               

               Conread position:
               4-249
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               16, 88
               

               Conread position:
               5-241
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               15, 10
               

               Conread position:
               7-209
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 174
               

               Conread position:
               7-240
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               183
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               13, 159
               

               Conread position:
               7-252
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               54, 17
               

               Conread position:
               8-234
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               17, 52
               

               Conread position:
               14-242
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               6, 36
               

               Conread position:
               15-208
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               10, 131
               

               Conread position:
               16-236
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               134, 9
               

               Conread position:
               17-233
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               16, 109
               

               Conread position:
               18-234
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               5, 43
               

               Conread position:
               18-234
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               7, 37
               

               Conread position:
               18-234
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               7, 145
               

               Conread position:
               18-241
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               9, 109
               

               Conread position:
               18-252
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               7, 58
               

               Conread position:
               19-241
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               5, 58
               

               Conread position:
               21-242
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               50, 99
               

               Conread position:
               22-225
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               83, 38
               

               Conread position:
               22-241
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               22-241
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               76, 155
               

               Conread position:
               22-241
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               72, 53
               

               Conread position:
               22-241
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               53, 30
               

               Conread position:
               22-241
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               53, 141
               

               Conread position:
               22-241
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               42, 25
               

               Conread position:
               22-241
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               73, 48
               

               Conread position:
               22-241
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               70, 40
               

               Conread position:
               22-241
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               44, 161
               

               Conread position:
               22-242
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               22-242
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               21, 55
               

               Conread position:
               22-244
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               81, 39
               

               Conread position:
               23-228
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               120, 53
               

               Conread position:
               23-232
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               86, 40
               

               Conread position:
               23-241
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               49, 36
               

               Conread position:
               23-253
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               77, 137
               

               Conread position:
               23-261
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               76, 39
               

               Conread position:
               26-232
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               80, 115
               

               Conread position:
               26-241
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               68, 114
               

               Conread position:
               32-231
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               30, 69
               

               Conread position:
               33-237
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               63, 35
               

               Conread position:
               33-242
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               66, 140
               

               Conread position:
               35-237
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               61, 17
               

               Conread position:
               36-233
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               37-232
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               37-234
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               45, 25
               

               Conread position:
               38-241
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               64, 37
               

               Conread position:
               40-234
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               10, 36
               

               Conread position:
               42-241
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               59, 126
               

               Conread position:
               43-241
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               52, 25
               

               Conread position:
               44-232
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               6, 33
               

               Conread position:
               53-241
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               96, 18
               

               Conread position:
               89-234
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               14, 72
               

               Conread position:
               97-240
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               26, 69
               

               Conread position:
               101-231
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               101-242
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               107-225
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               54, 0
               
Show alignments to all cow chromosomes.