Cow genome map
Conread name: | Ss1.1-rcbr0_006154.5 |
Conread position: | 1-151 |
Cow position: | chr12:37169952-37170102 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 119 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 19, 14 |
Conread position: | 1-177 |
Cow position: | chr12:42879688-42879510 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 127 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 24, 60 |
Conread position: | 1-209 |
Cow position: | chr12:17031609-17031405 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 154 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 26, 17 |
Conread position: | 1-209 |
Cow position: | chr12:44622349-44622144 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 157 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 19, 14 |
Conread position: | 1-231 |
Cow position: | chr12:28748936-28748706 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 168 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 20, 9 |
Conread position: | 1-232 |
Cow position: | chr12:19691237-19691465 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 177 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 23, 175 |
Conread position: | 1-232 |
Cow position: | chr12:29770578-29770802 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 173 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 19, 14 |
Conread position: | 1-232 |
Cow position: | chr12:29995470-29995690 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 157 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 99, 23 |
Conread position: | 1-233 |
Cow position: | chr12:26317459-26317236 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 172 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 24, 141 |
Conread position: | 1-234 |
Cow position: | chr12:25561364-25561139 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 178 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 24, 60 |
Conread position: | 1-234 |
Cow position: | chr12:32169534-32169305 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 172 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 24, 17 |
Conread position: | 1-234 |
Cow position: | chr12:40910295-40910522 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 168 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 19, 14 |
Conread position: | 1-241 |
Cow position: | chr12:6241313-6241071 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 173 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 24, 152 |
Conread position: | 1-241 |
Cow position: | chr12:8710815-8710593 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 180 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 19, 14 |
Conread position: | 1-241 |
Cow position: | chr12:18020852-18020615 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 173 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 14, 90 |
Conread position: | 1-241 |
Cow position: | chr12:19502434-19502658 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 170 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 23, 58 |
Conread position: | 1-241 |
Cow position: | chr12:32715039-32714804 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 176 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 98, 156 |
Conread position: | 1-241 |
Cow position: | chr12:34148367-34148589 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 175 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 18, 14 |
Conread position: | 1-242 |
Cow position: | chr12:3579280-3579041 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 175 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 66, 77 |
Conread position: | 1-242 |
Cow position: | chr12:9143381-9143154 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 174 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 24, 48 |
Conread position: | 1-242 |
Cow position: | chr12:39465573-39465339 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 178 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 26, 105 |
Conread position: | 1-242 |
Cow position: | chr12:39486418-39486190 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 182 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 20, 14 |
Conread position: | 1-243 |
Cow position: | chr12:27037456-27037688 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 172 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 24, 75 |
Conread position: | 1-250 |
Cow position: | chr12:35378196-35377952 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 172 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 22, 146 |
Conread position: | 1-252 |
Cow position: | chr12:11056869-11056626 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 175 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 24, 68 |
Conread position: | 1-263 |
Cow position: | chr12:45820372-45820626 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 190 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 20, 14 |
Conread position: | 1-266 |
Cow position: | chr12:20071578-20071845 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 185 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 20, 14 |
Conread position: | 2-234 |
Cow position: | chr12:38454902-38454687 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 166 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 23, 57 |
Conread position: | 2-241 |
Cow position: | chr12:15089509-15089256 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 196 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 18, 13 |
Conread position: | 4-232 |
Cow position: | chr12:26782876-26782652 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 165 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 30, 57 |
Conread position: | 4-241 |
Cow position: | chr12:6720318-6720081 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 181 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 21, 168 |
Conread position: | 4-241 |
Cow position: | chr12:27562836-27563075 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 167 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 16, 27 |
Conread position: | 4-249 |
Cow position: | chr12:17881853-17881619 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 172 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 16, 88 |
Conread position: | 5-241 |
Cow position: | chr12:18577829-18577611 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 173 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 15, 10 |
Conread position: | 7-209 |
Cow position: | chr12:18518661-18518456 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 152 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 18, 174 |
Conread position: | 7-240 |
Cow position: | chr12:18420933-18421164 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 183 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 13, 159 |
Conread position: | 7-252 |
Cow position: | chr12:42181143-42181391 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 179 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 54, 17 |
Conread position: | 8-234 |
Cow position: | chr12:30170656-30170436 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 171 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 17, 52 |
Conread position: | 14-242 |
Cow position: | chr12:17001240-17001019 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 169 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 6, 36 |
Conread position: | 15-208 |
Cow position: | chr12:36544663-36544858 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 151 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 10, 131 |
Conread position: | 16-236 |
Cow position: | chr12:8943247-8943454 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 154 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 134, 9 |
Conread position: | 17-233 |
Cow position: | chr12:22515751-22515970 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 157 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 16, 109 |
Conread position: | 18-234 |
Cow position: | chr12:17080237-17080027 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 157 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 5, 43 |
Conread position: | 18-234 |
Cow position: | chr12:18388313-18388513 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 167 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 7, 37 |
Conread position: | 18-234 |
Cow position: | chr12:29411512-29411720 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 156 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 7, 145 |
Conread position: | 18-241 |
Cow position: | chr12:30745698-30745475 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 173 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 9, 109 |
Conread position: | 18-252 |
Cow position: | chr12:28471616-28471390 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 165 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 7, 58 |
Conread position: | 19-241 |
Cow position: | chr12:24211389-24211178 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 154 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 5, 58 |
Conread position: | 21-242 |
Cow position: | chr12:6164049-6164268 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 168 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 50, 99 |
Conread position: | 22-225 |
Cow position: | chr12:4116461-4116271 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 150 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 83, 38 |
Conread position: | 22-241 |
Cow position: | chr12:3510532-3510325 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 158 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 22-241 |
Cow position: | chr12:5714602-5714390 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 155 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 76, 155 |
Conread position: | 22-241 |
Cow position: | chr12:15429624-15429838 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 162 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 72, 53 |
Conread position: | 22-241 |
Cow position: | chr12:18766001-18766219 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 166 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 53, 30 |
Conread position: | 22-241 |
Cow position: | chr12:30476454-30476239 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 155 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 53, 141 |
Conread position: | 22-241 |
Cow position: | chr12:30605193-30605394 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 159 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 42, 25 |
Conread position: | 22-241 |
Cow position: | chr12:32391820-32391607 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 159 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 73, 48 |
Conread position: | 22-241 |
Cow position: | chr12:33323524-33323737 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 155 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 70, 40 |
Conread position: | 22-241 |
Cow position: | chr12:37770849-37770637 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 164 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 44, 161 |
Conread position: | 22-242 |
Cow position: | chr12:5635481-5635687 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 158 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 22-242 |
Cow position: | chr12:19372135-19372345 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 159 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 21, 55 |
Conread position: | 22-244 |
Cow position: | chr12:24663086-24662874 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 162 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 81, 39 |
Conread position: | 23-228 |
Cow position: | chr12:18021563-18021368 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 146 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 120, 53 |
Conread position: | 23-232 |
Cow position: | chr12:25820459-25820662 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 151 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 86, 40 |
Conread position: | 23-241 |
Cow position: | chr12:28650928-28650714 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 155 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 49, 36 |
Conread position: | 23-253 |
Cow position: | chr12:25456090-25455863 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 163 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 77, 137 |
Conread position: | 23-261 |
Cow position: | chr12:41581085-41580853 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 165 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 76, 39 |
Conread position: | 26-232 |
Cow position: | chr12:17702258-17702462 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 154 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 80, 115 |
Conread position: | 26-241 |
Cow position: | chr12:5906024-5905819 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 164 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 68, 114 |
Conread position: | 32-231 |
Cow position: | chr12:30803178-30802983 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 147 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 30, 69 |
Conread position: | 33-237 |
Cow position: | chr12:4809264-4809071 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 145 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 63, 35 |
Conread position: | 33-242 |
Cow position: | chr12:3994919-3994710 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 150 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 66, 140 |
Conread position: | 35-237 |
Cow position: | chr12:4008324-4008515 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 149 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 61, 17 |
Conread position: | 36-233 |
Cow position: | chr12:18937364-18937157 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 145 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 37-232 |
Cow position: | chr12:26223030-26223213 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 141 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 37-234 |
Cow position: | chr12:35771064-35771263 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 137 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 45, 25 |
Conread position: | 38-241 |
Cow position: | chr12:15358290-15358090 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 146 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 64, 37 |
Conread position: | 40-234 |
Cow position: | chr12:13156630-13156443 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 144 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 10, 36 |
Conread position: | 42-241 |
Cow position: | chr12:42167602-42167407 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 144 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 59, 126 |
Conread position: | 43-241 |
Cow position: | chr12:17008155-17007959 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 157 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 52, 25 |
Conread position: | 44-232 |
Cow position: | chr12:3906425-3906239 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 139 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 6, 33 |
Conread position: | 53-241 |
Cow position: | chr12:6185956-6186139 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 135 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 96, 18 |
Conread position: | 89-234 |
Cow position: | chr12:41083974-41083834 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 114 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 14, 72 |
Conread position: | 97-240 |
Cow position: | chr12:5135040-5134902 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 115 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 26, 69 |
Conread position: | 101-231 |
Cow position: | chr12:27563486-27563615 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 101 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 101-242 |
Cow position: | chr12:25805219-25805349 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 113 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 107-225 |
Cow position: | chr12:12976292-12976403 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 97 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 54, 0 |
Show alignments to all cow chromosomes.