Cow genome map
| Conread name: | Ss1.1-rcbr0_006154.5 |
| Conread position: | 1-163 |
| Cow position: | chr13:21135948-21135782 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 24, 70 |
| Conread position: | 1-164 |
| Cow position: | chr13:15194782-15194613 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-168 |
| Cow position: | chr13:22085793-22085621 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-177 |
| Cow position: | chr13:18058297-18058114 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-182 |
| Cow position: | chr13:11381770-11381587 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 22, 174 |
| Conread position: | 1-197 |
| Cow position: | chr13:17966255-17966064 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 24, 71 |
| Conread position: | 1-197 |
| Cow position: | chr13:17971077-17970883 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 26, 14 |
| Conread position: | 1-198 |
| Cow position: | chr13:8374820-8374626 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 24, 70 |
| Conread position: | 1-201 |
| Cow position: | chr13:18696793-18696991 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-203 |
| Cow position: | chr13:54389068-54388870 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 161 |
| Conread position: | 1-212 |
| Cow position: | chr13:20880977-20880766 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 165 |
| Conread position: | 1-217 |
| Cow position: | chr13:54582825-54583042 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 24, 173 |
| Conread position: | 1-228 |
| Cow position: | chr13:20473729-20473515 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 60 |
| Conread position: | 1-232 |
| Cow position: | chr13:18166685-18166906 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-232 |
| Cow position: | chr13:31813829-31814043 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 24, 48 |
| Conread position: | 1-232 |
| Cow position: | chr13:55316238-55316013 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-233 |
| Cow position: | chr13:43480010-43480238 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 24, 159 |
| Conread position: | 1-234 |
| Cow position: | chr13:15885069-15884835 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 22, 69 |
| Conread position: | 1-234 |
| Cow position: | chr13:24369534-24369762 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 23, 60 |
| Conread position: | 1-234 |
| Cow position: | chr13:24585996-24586224 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-234 |
| Cow position: | chr13:38012314-38012539 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 102, 44 |
| Conread position: | 1-234 |
| Cow position: | chr13:55674255-55674027 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 24, 62 |
| Conread position: | 1-236 |
| Cow position: | chr13:41806725-41806960 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 186 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-237 |
| Cow position: | chr13:5082603-5082835 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 22, 144 |
| Conread position: | 1-237 |
| Cow position: | chr13:13260953-13261189 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 22, 88 |
| Conread position: | 1-237 |
| Cow position: | chr13:40943196-40943429 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 14, 59 |
| Conread position: | 1-237 |
| Cow position: | chr13:49503579-49503347 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 26, 75 |
| Conread position: | 1-239 |
| Cow position: | chr13:12670498-12670262 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 18, 8 |
| Conread position: | 1-240 |
| Cow position: | chr13:19022224-19022462 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-241 |
| Cow position: | chr13:971945-971713 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-241 |
| Cow position: | chr13:12202316-12202550 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 22, 82 |
| Conread position: | 1-241 |
| Cow position: | chr13:12619162-12618924 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 22, 68 |
| Conread position: | 1-241 |
| Cow position: | chr13:15166768-15167008 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 63, 14 |
| Conread position: | 1-241 |
| Cow position: | chr13:15288972-15288740 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 14, 19 |
| Conread position: | 1-241 |
| Cow position: | chr13:17439818-17439581 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 24, 62 |
| Conread position: | 1-241 |
| Cow position: | chr13:20820876-20820655 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 22, 47 |
| Conread position: | 1-241 |
| Cow position: | chr13:23478983-23479214 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 24, 97 |
| Conread position: | 1-241 |
| Cow position: | chr13:27525308-27525076 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 14, 60 |
| Conread position: | 1-241 |
| Cow position: | chr13:34281628-34281865 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 190 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-241 |
| Cow position: | chr13:45023259-45023023 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 185 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 24, 59 |
| Conread position: | 1-241 |
| Cow position: | chr13:51528490-51528261 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 39 |
| Conread position: | 1-241 |
| Cow position: | chr13:56155201-56154976 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 14, 75 |
| Conread position: | 1-241 |
| Cow position: | chr13:57494237-57493998 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 30, 90 |
| Conread position: | 1-242 |
| Cow position: | chr13:48037573-48037806 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-243 |
| Cow position: | chr13:20706252-20706015 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-245 |
| Cow position: | chr13:17114426-17114190 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 22, 159 |
| Conread position: | 1-261 |
| Cow position: | chr13:13501665-13501412 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 14, 51 |
| Conread position: | 1-263 |
| Cow position: | chr13:11460586-11460833 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 26, 60 |
| Conread position: | 2-221 |
| Cow position: | chr13:15902978-15903182 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 18, 13 |
| Conread position: | 2-223 |
| Cow position: | chr13:52922049-52922263 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 18, 13 |
| Conread position: | 2-234 |
| Cow position: | chr13:17745197-17745417 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 23, 104 |
| Conread position: | 2-237 |
| Cow position: | chr13:20666435-20666205 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 23, 152 |
| Conread position: | 2-241 |
| Cow position: | chr13:12408335-12408098 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 22, 71 |
| Conread position: | 2-241 |
| Cow position: | chr13:15257415-15257193 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 23, 61 |
| Conread position: | 2-241 |
| Cow position: | chr13:17800026-17800257 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 67, 88 |
| Conread position: | 2-241 |
| Cow position: | chr13:37521422-37521195 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 18, 13 |
| Conread position: | 2-241 |
| Cow position: | chr13:54702140-54702376 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 18, 13 |
| Conread position: | 3-233 |
| Cow position: | chr13:61990380-61990157 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 21, 60 |
| Conread position: | 3-234 |
| Cow position: | chr13:33517971-33517746 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 30, 75 |
| Conread position: | 3-241 |
| Cow position: | chr13:53566549-53566784 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 22, 40 |
| Conread position: | 5-234 |
| Cow position: | chr13:61977003-61976785 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 15, 10 |
| Conread position: | 7-234 |
| Cow position: | chr13:42200580-42200797 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 92, 17 |
| Conread position: | 11-234 |
| Cow position: | chr13:12282803-12283016 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 30, 49 |
| Conread position: | 12-241 |
| Cow position: | chr13:15869088-15869304 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 87, 40 |
| Conread position: | 12-241 |
| Cow position: | chr13:17292173-17291945 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 8, 63 |
| Conread position: | 12-260 |
| Cow position: | chr13:32283091-32283333 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 8, 49 |
| Conread position: | 14-214 |
| Cow position: | chr13:2774096-2774289 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 6, 46 |
| Conread position: | 14-231 |
| Cow position: | chr13:14016603-14016390 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 19, 10 |
| Conread position: | 14-233 |
| Cow position: | chr13:15110279-15110501 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 6, 146 |
| Conread position: | 14-241 |
| Cow position: | chr13:1043004-1042771 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 6, 158 |
| Conread position: | 14-241 |
| Cow position: | chr13:12546945-12546720 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 10, 48 |
| Conread position: | 14-241 |
| Cow position: | chr13:17622251-17622469 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 21, 48 |
| Conread position: | 18-206 |
| Cow position: | chr13:151933-152108 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 7, 41 |
| Conread position: | 18-233 |
| Cow position: | chr13:56686401-56686604 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 7, 99 |
| Conread position: | 18-241 |
| Cow position: | chr13:13088996-13089209 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 52, 44 |
| Conread position: | 18-241 |
| Cow position: | chr13:24376463-24376675 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 9, 100 |
| Conread position: | 18-241 |
| Cow position: | chr13:37484309-37484085 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 7, 154 |
| Conread position: | 18-242 |
| Cow position: | chr13:12682576-12682355 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 7, 150 |
| Conread position: | 18-242 |
| Cow position: | chr13:38329586-38329816 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 7, 164 |
| Conread position: | 18-245 |
| Cow position: | chr13:18172306-18172530 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 5, 159 |
| Conread position: | 19-234 |
| Cow position: | chr13:52199058-52199267 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 80, 40 |
| Conread position: | 19-237 |
| Cow position: | chr13:6061037-6060826 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 5, 58 |
| Conread position: | 19-241 |
| Cow position: | chr13:19883066-19882850 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 8, 58 |
| Conread position: | 19-241 |
| Cow position: | chr13:23270238-23270028 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 5, 71 |
| Conread position: | 19-241 |
| Cow position: | chr13:25531821-25531603 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 5, 154 |
| Conread position: | 22-212 |
| Cow position: | chr13:28652776-28652959 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 74, 38 |
| Conread position: | 22-234 |
| Cow position: | chr13:9593480-9593685 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 60, 140 |
| Conread position: | 22-234 |
| Cow position: | chr13:20839541-20839745 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 77, 38 |
| Conread position: | 22-234 |
| Cow position: | chr13:49022893-49022692 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 57, 37 |
| Conread position: | 22-234 |
| Cow position: | chr13:62474824-62474621 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 39, 50 |
| Conread position: | 22-237 |
| Cow position: | chr13:10929018-10928809 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 93, 40 |
| Conread position: | 22-241 |
| Cow position: | chr13:15529059-15528843 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 83, 153 |
| Conread position: | 22-241 |
| Cow position: | chr13:25261837-25261623 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 40, 48 |
| Conread position: | 22-242 |
| Cow position: | chr13:13265781-13265989 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 41, 54 |
| Conread position: | 23-222 |
| Cow position: | chr13:13176626-13176820 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 82, 45 |
| Conread position: | 23-232 |
| Cow position: | chr13:21176346-21176148 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 74, 39 |
| Conread position: | 23-234 |
| Cow position: | chr13:25926766-25926970 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 47, 131 |
| Conread position: | 23-241 |
| Cow position: | chr13:50690423-50690207 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 9, 72 |
| Conread position: | 25-241 |
| Cow position: | chr13:563165-562953 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 78, 49 |
| Conread position: | 26-241 |
| Cow position: | chr13:17821291-17821074 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 77, 193 |
| Conread position: | 26-241 |
| Cow position: | chr13:18852057-18852261 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 79, 149 |
| Conread position: | 26-241 |
| Cow position: | chr13:34263391-34263188 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 18 |
| Conread position: | 26-245 |
| Cow position: | chr13:20684143-20683932 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 80, 42 |
| Conread position: | 26-245 |
| Cow position: | chr13:20864037-20863828 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 34 |
| Conread position: | 27-241 |
| Cow position: | chr13:21242104-21241907 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 183, 33 |
| Conread position: | 27-241 |
| Cow position: | chr13:25062393-25062595 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 29-241 |
| Cow position: | chr13:16155730-16155532 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 40, 61 |
| Conread position: | 35-237 |
| Cow position: | chr13:21189263-21189462 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 31, 9 |
| Conread position: | 36-226 |
| Cow position: | chr13:17021740-17021555 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 65, 35 |
| Conread position: | 36-234 |
| Cow position: | chr13:9587600-9587405 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 119 |
| Conread position: | 36-241 |
| Cow position: | chr13:14544105-14544307 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 63, 45 |
| Conread position: | 36-242 |
| Cow position: | chr13:38561930-38562131 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 59, 26 |
| Conread position: | 39-242 |
| Cow position: | chr13:15172422-15172221 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 28, 123 |
| Conread position: | 42-197 |
| Cow position: | chr13:19426703-19426547 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 64, 129 |
| Conread position: | 43-241 |
| Cow position: | chr13:35659747-35659938 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 56, 131 |
| Conread position: | 47-242 |
| Cow position: | chr13:311431-311616 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 49-241 |
| Cow position: | chr13:6975789-6975605 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 54, 27 |
| Conread position: | 52-241 |
| Cow position: | chr13:21235684-21235500 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 12, 83 |
| Conread position: | 53-241 |
| Cow position: | chr13:54344773-54344961 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 17, 121 |
| Conread position: | 53-242 |
| Cow position: | chr13:23960810-23960622 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 16, 115 |
| Conread position: | 55-241 |
| Cow position: | chr13:44322912-44323087 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 50, 21 |
| Conread position: | 65-234 |
| Cow position: | chr13:547502-547666 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 40, 6 |
| Conread position: | 67-244 |
| Cow position: | chr13:26261781-26261605 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 109 |
| Conread position: | 75-234 |
| Cow position: | chr13:21209886-21210040 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 35, 83 |
| Conread position: | 75-234 |
| Cow position: | chr13:54331045-54331197 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 89-234 |
| Cow position: | chr13:56148576-56148719 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 8, 82 |
| Conread position: | 95-241 |
| Cow position: | chr13:14927285-14927424 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 97-241 |
| Cow position: | chr13:12989895-12990031 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 36, 69 |
| Conread position: | 97-241 |
| Cow position: | chr13:15740115-15740254 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 97-241 |
| Cow position: | chr13:17815820-17815956 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 97-241 |
| Cow position: | chr13:60690675-60690537 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 47, 74 |
| Conread position: | 99-241 |
| Cow position: | chr13:22025655-22025524 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 101-241 |
| Cow position: | chr13:61170665-61170530 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 103-241 |
| Cow position: | chr13:46525388-46525257 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 107-244 |
| Cow position: | chr13:33054334-33054203 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 43, 55 |
| Conread position: | 115-238 |
| Cow position: | chr13:966143-966259 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
Show alignments to all cow chromosomes.