Cow genome map

Conread name: Ss1.1-rcbr0_006154.5

Conread position: 1-230
Cow position: chr14:27591947-27591723 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 173
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 24, 150

Conread position: 1-232
Cow position: chr14:10078278-10078500 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 19, 14

Conread position: 1-232
Cow position: chr14:26442333-26442104 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 24, 141

Conread position: 1-232
Cow position: chr14:33462176-33462393 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 1-233
Cow position: chr14:34199833-34199607 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 70

Conread position: 1-234
Cow position: chr14:28115177-28114947 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 19, 14

Conread position: 1-234
Cow position: chr14:42596393-42596616 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 129, 74

Conread position: 1-237
Cow position: chr14:42154962-42154722 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 186
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 20, 14

Conread position: 1-241
Cow position: chr14:1646176-1645946 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 183
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 14, 56

Conread position: 1-241
Cow position: chr14:3194869-3195093 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 24, 15

Conread position: 1-241
Cow position: chr14:16760410-16760642 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 42

Conread position: 1-241
Cow position: chr14:19372349-19372586 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 185
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 24, 160

Conread position: 1-241
Cow position: chr14:20640619-20640381 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 196
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 19, 8

Conread position: 1-241
Cow position: chr14:22989044-22989277 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 20, 14

Conread position: 1-241
Cow position: chr14:25681937-25682188 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 174
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 23, 59

Conread position: 1-241
Cow position: chr14:29632875-29632640 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position: chr14:32452259-32452499 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 168
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 19

Conread position: 1-241
Cow position: chr14:33791198-33791432 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 189
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position: chr14:35018743-35018513 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 26, 77

Conread position: 1-241
Cow position: chr14:37131663-37131901 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 184
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position: chr14:39770224-39769987 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 24, 73

Conread position: 1-241
Cow position: chr14:39778762-39778996 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position: chr14:41210865-41211099 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 184
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 24, 74

Conread position: 1-242
Cow position: chr14:9308240-9308469 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 14

Conread position: 1-242
Cow position: chr14:13845995-13846230 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 19, 14

Conread position: 1-251
Cow position: chr14:24796423-24796170 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 189
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 75

Conread position: 1-252
Cow position: chr14:48427081-48427331 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 14, 167

Conread position: 3-241
Cow position: chr14:36555143-36554909 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 161
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 12

Conread position: 5-206
Cow position: chr14:16256780-16256977 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 10, 163

Conread position: 5-233
Cow position: chr14:24416892-24417122 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 8, 170

Conread position: 5-234
Cow position: chr14:26191090-26190860 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 16, 10

Conread position: 5-241
Cow position: chr14:14979694-14979460 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 19, 55

Conread position: 5-241
Cow position: chr14:41749745-41749520 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 10

Conread position: 5-261
Cow position: chr14:13042769-13043024 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 16, 10

Conread position: 6-241
Cow position: chr14:24922112-24922349 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 169

Conread position: 7-233
Cow position: chr14:19189060-19189274 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 56

Conread position: 7-234
Cow position: chr14:24387459-24387687 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 7, 68

Conread position: 7-234
Cow position: chr14:35544502-35544279 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 37

Conread position: 7-236
Cow position: chr14:21284637-21284868 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 13, 153

Conread position: 7-244
Cow position: chr14:24236843-24237071 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 71, 15

Conread position: 14-231
Cow position: chr14:47672861-47672649 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 90, 45

Conread position: 14-234
Cow position: chr14:26620639-26620855 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 147

Conread position: 14-241
Cow position: chr14:36709146-36709366 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 65, 17

Conread position: 15-234
Cow position: chr14:25779123-25779330 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 18-241
Cow position: chr14:18345705-18345487 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 53

Conread position: 18-241
Cow position: chr14:20666992-20666778 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 11, 60

Conread position: 18-241
Cow position: chr14:27848221-27848443 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 5, 63

Conread position: 19-241
Cow position: chr14:41127925-41128136 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 5, 40

Conread position: 21-234
Cow position: chr14:20110691-20110484 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 75, 142

Conread position: 22-169
Cow position: chr14:24607996-24608147 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 22-232
Cow position: chr14:20384953-20384749 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 82, 54

Conread position: 22-234
Cow position: chr14:8964580-8964779 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 22-234
Cow position: chr14:19221910-19222118 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 37, 149

Conread position: 22-234
Cow position: chr14:26433210-26433005 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 139, 0

Conread position: 22-234
Cow position: chr14:40432957-40433158 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 68, 36

Conread position: 22-241
Cow position: chr14:8750103-8750317 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 54, 147

Conread position: 22-241
Cow position: chr14:11820088-11819881 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 81, 36

Conread position: 22-241
Cow position: chr14:15054959-15054743 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 84, 147

Conread position: 23-241
Cow position: chr14:18904579-18904365 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 37

Conread position: 25-234
Cow position: chr14:39422558-39422352 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 18

Conread position: 25-241
Cow position: chr14:19129541-19129754 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 144

Conread position: 25-244
Cow position: chr14:49021865-49021653 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 127, 37

Conread position: 36-241
Cow position: chr14:30926750-30926947 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 68

Conread position: 52-241
Cow position: chr14:12546523-12546344 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 44, 92

Conread position: 56-234
Cow position: chr14:19633244-19633418 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 20

Conread position: 63-241
Cow position: chr14:43035954-43036121 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 9, 106

Conread position: 64-234
Cow position: chr14:8495227-8495390 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 108

Conread position: 68-241
Cow position: chr14:8784261-8784422 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 32, 7

Conread position: 68-241
Cow position: chr14:27791609-27791773 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 95-234
Cow position: chr14:41325330-41325201 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 97-241
Cow position: chr14:19624194-19624333 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 74

Conread position: 101-241
Cow position: chr14:28004089-28004223 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 47, 64

Conread position: 101-252
Cow position: chr14:48689638-48689784 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 70

Conread position: 103-241
Cow position: chr14:5502047-5501909 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 102
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 105-234
Cow position: chr14:27866021-27865896 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 0

Show alignments to all cow chromosomes.