Cow genome map


           Conread name:
           Ss1.1-rcbr0_006154.5
        

               Conread position:
               1-169
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               27, 97
               

               Conread position:
               1-225
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               24, 44
               

               Conread position:
               1-230
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               23, 17
               

               Conread position:
               1-230
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               22, 14
               

               Conread position:
               1-233
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               177
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               24, 138
               

               Conread position:
               1-234
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               22, 42
               

               Conread position:
               1-234
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               185
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               26, 120
               

               Conread position:
               1-234
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               24, 121
               

               Conread position:
               1-234
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               14, 20
               

               Conread position:
               1-237
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               19, 14
               

               Conread position:
               1-237
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               24, 62
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               22, 172
               

               Conread position:
               1-240
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               25, 39
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               12, 173
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               22, 58
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               22, 172
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               24, 172
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               14, 73
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               98, 12
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               14, 18
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               23, 64
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               18, 14
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               22, 172
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               19, 14
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               24, 161
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               19, 14
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               19, 14
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               61, 14
               

               Conread position:
               2-205
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               18, 13
               

               Conread position:
               2-234
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               13, 157
               

               Conread position:
               2-235
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               21, 71
               

               Conread position:
               2-240
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 13
               

               Conread position:
               3-241
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 12
               

               Conread position:
               3-241
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               17, 66
               

               Conread position:
               5-234
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               15, 10
               

               Conread position:
               5-236
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               10, 49
               

               Conread position:
               5-241
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               20, 38
               

               Conread position:
               8-234
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               12, 42
               

               Conread position:
               12-234
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               9, 22
               

               Conread position:
               12-241
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               8, 48
               

               Conread position:
               14-241
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               88, 16
               

               Conread position:
               14-241
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               10, 160
               

               Conread position:
               14-242
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               5, 56
               

               Conread position:
               18-197
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               7, 44
               

               Conread position:
               18-234
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               5, 37
               

               Conread position:
               18-240
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 44
               

               Conread position:
               18-241
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               7, 38
               

               Conread position:
               18-263
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               6, 44
               

               Conread position:
               19-234
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               5, 36
               

               Conread position:
               19-235
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               77, 49
               

               Conread position:
               19-239
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               19-241
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               5, 44
               

               Conread position:
               22-169
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               22-223
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               83, 35
               

               Conread position:
               22-234
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               57, 139
               

               Conread position:
               22-234
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               46, 153
               

               Conread position:
               22-235
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               35, 50
               

               Conread position:
               22-241
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               42, 137
               

               Conread position:
               22-241
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               165, 48
               

               Conread position:
               22-241
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               42, 56
               

               Conread position:
               22-241
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               22-259
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               75, 38
               

               Conread position:
               23-232
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               59, 39
               

               Conread position:
               23-239
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               76, 36
               

               Conread position:
               23-240
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               78, 35
               

               Conread position:
               23-241
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               47, 86
               

               Conread position:
               26-241
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               74, 13
               

               Conread position:
               26-241
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               73, 50
               

               Conread position:
               28-241
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               43, 34
               

               Conread position:
               31-234
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               33-233
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               33-234
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               72, 25
               

               Conread position:
               34-230
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               65, 40
               

               Conread position:
               34-241
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               65, 127
               

               Conread position:
               36-232
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               27, 139
               

               Conread position:
               37-234
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               35, 22
               

               Conread position:
               44-232
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               32, 9
               

               Conread position:
               60-241
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 55
               

               Conread position:
               63-233
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               67-234
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               12, 94
               

               Conread position:
               70-234
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               89-222
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               97-234
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               108-240
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               53, 0
               
Show alignments to all cow chromosomes.