Cow genome map


           Conread name:
           Ss1.1-rcbr0_006154.5
        

               Conread position:
               1-169
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               14, 42
               

               Conread position:
               1-169
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               1-230
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               23, 112
               

               Conread position:
               1-234
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               24, 158
               

               Conread position:
               1-234
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               24, 58
               

               Conread position:
               1-234
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               26, 165
               

               Conread position:
               1-234
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               23, 42
               

               Conread position:
               1-234
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               24, 68
               

               Conread position:
               1-234
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 172
               

               Conread position:
               1-234
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 14
               

               Conread position:
               1-237
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               25, 116
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               76, 59
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               24, 33
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               22, 59
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               24, 105
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               20, 14
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               19, 10
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               22, 60
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               23, 71
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               26, 17
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               19, 14
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               24, 75
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               26, 14
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               24, 81
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               19, 14
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               14, 8
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               24, 71
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               19, 14
               

               Conread position:
               1-242
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               19, 14
               

               Conread position:
               1-242
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               1-245
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               24, 165
               

               Conread position:
               1-247
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               24, 58
               

               Conread position:
               1-249
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               23, 58
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               14, 42
               

               Conread position:
               2-184
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               97, 15
               

               Conread position:
               2-234
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               18, 173
               

               Conread position:
               2-240
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               25, 169
               

               Conread position:
               2-241
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               18, 13
               

               Conread position:
               2-241
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               18, 13
               

               Conread position:
               2-241
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               18, 13
               

               Conread position:
               3-234
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               17, 68
               

               Conread position:
               4-241
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               23, 11
               

               Conread position:
               4-249
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               29, 6
               

               Conread position:
               5-241
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               16, 10
               

               Conread position:
               7-225
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               98, 17
               

               Conread position:
               7-241
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               18, 169
               

               Conread position:
               7-241
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               64, 103
               

               Conread position:
               7-241
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               14, 161
               

               Conread position:
               8-234
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               25, 168
               

               Conread position:
               10-234
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               57, 164
               

               Conread position:
               12-241
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               21, 156
               

               Conread position:
               14-234
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               14-242
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               6, 56
               

               Conread position:
               15-241
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               10, 153
               

               Conread position:
               17-234
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               82, 5
               

               Conread position:
               17-241
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               7, 156
               

               Conread position:
               17-241
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               53, 5
               

               Conread position:
               18-222
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               7, 41
               

               Conread position:
               18-234
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               6, 15
               

               Conread position:
               18-236
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               7, 150
               

               Conread position:
               18-241
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               7, 53
               

               Conread position:
               19-240
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               5, 69
               

               Conread position:
               20-242
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               5, 94
               

               Conread position:
               22-197
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               161, 36
               

               Conread position:
               22-234
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               57, 76
               

               Conread position:
               22-234
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               57, 42
               

               Conread position:
               22-241
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               76, 145
               

               Conread position:
               22-241
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               38, 50
               

               Conread position:
               22-241
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               106, 46
               

               Conread position:
               22-241
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               83, 37
               

               Conread position:
               22-241
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               38, 143
               

               Conread position:
               22-242
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               77, 145
               

               Conread position:
               23-234
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               58, 105
               

               Conread position:
               23-237
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               24-241
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               57, 42
               

               Conread position:
               26-240
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               79, 148
               

               Conread position:
               26-242
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               72, 134
               

               Conread position:
               29-242
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               31, 134
               

               Conread position:
               31-230
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               66, 145
               

               Conread position:
               34-241
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               25, 43
               

               Conread position:
               36-241
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               60, 32
               

               Conread position:
               36-241
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               62, 13
               

               Conread position:
               36-242
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               67, 28
               

               Conread position:
               36-242
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               24, 33
               

               Conread position:
               38-241
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               32, 132
               

               Conread position:
               43-241
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               62, 21
               

               Conread position:
               44-241
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               166, 9
               

               Conread position:
               47-232
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               50, 29
               

               Conread position:
               53-241
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               52, 86
               

               Conread position:
               55-240
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               14, 22
               

               Conread position:
               62-233
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               17, 105
               

               Conread position:
               63-241
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               43, 98
               

               Conread position:
               65-241
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               40, 102
               

               Conread position:
               66-244
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               39, 78
               

               Conread position:
               69-236
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               28, 78
               

               Conread position:
               73-236
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               17, 100
               

               Conread position:
               75-245
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               27, 90
               

               Conread position:
               83-241
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               16, 77
               

               Conread position:
               95-234
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               115, 66
               

               Conread position:
               97-241
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               97-242
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               54, 33
               

               Conread position:
               101-234
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               48, 71
               

               Conread position:
               107-245
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               133, 50
               

               Conread position:
               121-236
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               47, 0
               
Show alignments to all cow chromosomes.