Cow genome map


           Conread name:
           Ss1.1-rcbr0_006154.5
        

               Conread position:
               1-152
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               14, 62
               

               Conread position:
               1-169
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               19, 14
               

               Conread position:
               1-169
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               1-177
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               24, 58
               

               Conread position:
               1-212
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               14, 74
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               19, 14
               

               Conread position:
               1-232
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               24, 161
               

               Conread position:
               1-233
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               24, 68
               

               Conread position:
               1-234
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               22, 63
               

               Conread position:
               1-234
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               14, 18
               

               Conread position:
               1-234
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               19, 14
               

               Conread position:
               1-234
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               26, 61
               

               Conread position:
               1-237
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               14, 76
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               24, 58
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               24, 60
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               14, 18
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               20, 14
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               183
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               23, 161
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               24, 167
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               23, 58
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               26, 175
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               24, 58
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               104, 14
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               22, 165
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               19, 14
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               14, 44
               

               Conread position:
               1-246
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               19, 14
               

               Conread position:
               1-249
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               24, 60
               

               Conread position:
               1-268
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               24, 76
               

               Conread position:
               2-232
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               18, 13
               

               Conread position:
               2-241
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               19, 13
               

               Conread position:
               2-241
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               13, 172
               

               Conread position:
               3-241
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               17, 57
               

               Conread position:
               3-245
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               18, 133
               

               Conread position:
               5-241
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 64
               

               Conread position:
               5-241
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               15, 10
               

               Conread position:
               5-241
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               18, 10
               

               Conread position:
               5-242
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               15, 10
               

               Conread position:
               7-189
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               20, 62
               

               Conread position:
               7-223
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               18, 66
               

               Conread position:
               7-234
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               92, 18
               

               Conread position:
               7-241
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               17, 25
               

               Conread position:
               10-234
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               13, 60
               

               Conread position:
               12-241
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               60, 6
               

               Conread position:
               14-201
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               6, 164
               

               Conread position:
               14-215
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               6, 56
               

               Conread position:
               14-236
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               6, 47
               

               Conread position:
               14-237
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               10, 65
               

               Conread position:
               14-241
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               6, 45
               

               Conread position:
               14-241
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               6, 50
               

               Conread position:
               14-241
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               10, 47
               

               Conread position:
               15-241
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               9, 33
               

               Conread position:
               18-234
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               5, 88
               

               Conread position:
               18-241
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               5, 45
               

               Conread position:
               18-241
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               7, 43
               

               Conread position:
               18-253
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               7, 41
               

               Conread position:
               19-232
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               5, 128
               

               Conread position:
               22-223
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               80, 35
               

               Conread position:
               22-234
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               75, 27
               

               Conread position:
               22-237
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               22-241
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               28, 151
               

               Conread position:
               22-241
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               88, 38
               

               Conread position:
               22-241
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               47, 30
               

               Conread position:
               22-241
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               48, 27
               

               Conread position:
               23-241
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               82, 148
               

               Conread position:
               23-241
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               40, 152
               

               Conread position:
               23-242
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               81, 153
               

               Conread position:
               24-232
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               68, 30
               

               Conread position:
               24-236
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               25-234
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               79, 37
               

               Conread position:
               25-241
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               93, 142
               

               Conread position:
               25-241
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               56, 151
               

               Conread position:
               26-234
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               72, 8
               

               Conread position:
               26-236
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               69, 34
               

               Conread position:
               26-241
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               70, 65
               

               Conread position:
               26-241
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               29, 53
               

               Conread position:
               26-241
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               51, 88
               

               Conread position:
               26-252
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               178
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               71, 49
               

               Conread position:
               27-234
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               40, 68
               

               Conread position:
               27-241
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               23, 17
               

               Conread position:
               27-241
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               39, 87
               

               Conread position:
               31-235
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               39, 31
               

               Conread position:
               36-232
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               63, 40
               

               Conread position:
               36-233
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               66, 24
               

               Conread position:
               36-233
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               53, 68
               

               Conread position:
               36-241
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               22, 80
               

               Conread position:
               37-249
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               45-238
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               49-262
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               195, 26
               

               Conread position:
               53-234
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               50, 24
               

               Conread position:
               53-237
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               47, 21
               

               Conread position:
               69-241
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               28, 106
               

               Conread position:
               97-241
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               53, 39
               

               Conread position:
               97-241
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               102-241
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               103-241
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               112-241
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               30, 0
               
Show alignments to all cow chromosomes.