Cow genome map

Conread name: Ss1.1-rcbr0_006154.5

Conread position: 1-168
Cow position:
Alignm length: 174
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 20, 14

Conread position: 1-169
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 24, 75

Conread position: 1-210
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 24, 109

Conread position: 1-230
Cow position:
Alignm length: 235
Alignm identity: 170
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 24, 67

Conread position: 1-230
Cow position:
Alignm length: 232
Alignm identity: 165
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 81

Conread position: 1-232
Cow position:
Alignm length: 238
Alignm identity: 167
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 24, 175

Conread position: 1-233
Cow position:
Alignm length: 244
Alignm identity: 172
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 14

Conread position: 1-233
Cow position:
Alignm length: 239
Alignm identity: 178
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 19, 14

Conread position: 1-234
Cow position:
Alignm length: 242
Alignm identity: 175
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 26, 143

Conread position: 1-234
Cow position:
Alignm length: 242
Alignm identity: 173
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 14, 172

Conread position: 1-234
Cow position:
Alignm length: 237
Alignm identity: 175
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 99, 33

Conread position: 1-240
Cow position:
Alignm length: 245
Alignm identity: 177
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 15, 138

Conread position: 1-240
Cow position:
Alignm length: 246
Alignm identity: 179
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position:
Alignm length: 244
Alignm identity: 178
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 14, 49

Conread position: 1-241
Cow position:
Alignm length: 246
Alignm identity: 182
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 24, 175

Conread position: 1-241
Cow position:
Alignm length: 246
Alignm identity: 170
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 24, 101

Conread position: 1-241
Cow position:
Alignm length: 249
Alignm identity: 183
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 19, 164

Conread position: 1-241
Cow position:
Alignm length: 245
Alignm identity: 175
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 14, 21

Conread position: 1-241
Cow position:
Alignm length: 250
Alignm identity: 187
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position:
Alignm length: 245
Alignm identity: 178
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 25, 158

Conread position: 1-241
Cow position:
Alignm length: 248
Alignm identity: 187
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 25, 166

Conread position: 1-241
Cow position:
Alignm length: 243
Alignm identity: 165
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 24, 90

Conread position: 1-241
Cow position:
Alignm length: 247
Alignm identity: 183
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 24, 63

Conread position: 1-241
Cow position:
Alignm length: 243
Alignm identity: 177
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position:
Alignm length: 247
Alignm identity: 181
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 24, 171

Conread position: 1-241
Cow position:
Alignm length: 243
Alignm identity: 173
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position:
Alignm length: 244
Alignm identity: 177
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 95, 59

Conread position: 1-241
Cow position:
Alignm length: 242
Alignm identity: 180
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 24, 104

Conread position: 1-241
Cow position:
Alignm length: 246
Alignm identity: 169
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 14

Conread position: 1-241
Cow position:
Alignm length: 243
Alignm identity: 172
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 24, 54

Conread position: 1-242
Cow position:
Alignm length: 246
Alignm identity: 171
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 52

Conread position: 1-242
Cow position:
Alignm length: 249
Alignm identity: 169
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 24, 177

Conread position: 1-242
Cow position:
Alignm length: 248
Alignm identity: 176
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 24, 38

Conread position: 1-242
Cow position:
Alignm length: 246
Alignm identity: 166
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 19, 77

Conread position: 1-245
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 20, 14

Conread position: 1-246
Cow position:
Alignm length: 253
Alignm identity: 176
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 166

Conread position: 2-209
Cow position:
Alignm length: 214
Alignm identity: 159
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 13, 17

Conread position: 2-222
Cow position:
Alignm length: 228
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 169

Conread position: 2-234
Cow position:
Alignm length: 235
Alignm identity: 172
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 12, 48

Conread position: 3-234
Cow position:
Alignm length: 240
Alignm identity: 176
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 17, 171

Conread position: 3-241
Cow position:
Alignm length: 244
Alignm identity: 169
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 12, 26

Conread position: 4-241
Cow position:
Alignm length: 244
Alignm identity: 181
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 23, 55

Conread position: 5-259
Cow position:
Alignm length: 259
Alignm identity: 194
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 15, 10

Conread position: 6-241
Cow position:
Alignm length: 244
Alignm identity: 177
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 14, 72

Conread position: 7-241
Cow position:
Alignm length: 236
Alignm identity: 170
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 68

Conread position: 8-232
Cow position:
Alignm length: 236
Alignm identity: 160
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 12, 62

Conread position: 8-234
Cow position:
Alignm length: 240
Alignm identity: 169
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 176

Conread position: 14-241
Cow position:
Alignm length: 236
Alignm identity: 169
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 139

Conread position: 14-242
Cow position:
Alignm length: 233
Alignm identity: 176
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 11, 147

Conread position: 14-242
Cow position:
Alignm length: 235
Alignm identity: 167
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 8, 55

Conread position: 15-233
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 159

Conread position: 15-241
Cow position:
Alignm length: 227
Alignm identity: 164
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 17-241
Cow position:
Alignm length: 229
Alignm identity: 162
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 154

Conread position: 18-234
Cow position:
Alignm length: 220
Alignm identity: 159
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 7, 97

Conread position: 18-241
Cow position:
Alignm length: 228
Alignm identity: 161
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 85, 149

Conread position: 18-241
Cow position:
Alignm length: 227
Alignm identity: 160
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 7, 30

Conread position: 18-245
Cow position:
Alignm length: 236
Alignm identity: 168
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 7, 65

Conread position: 18-249
Cow position:
Alignm length: 237
Alignm identity: 168
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 7, 51

Conread position: 19-233
Cow position:
Alignm length: 218
Alignm identity: 148
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 5, 140

Conread position: 19-241
Cow position:
Alignm length: 225
Alignm identity: 158
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 5, 49

Conread position: 19-241
Cow position:
Alignm length: 224
Alignm identity: 154
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 5, 146

Conread position: 22-169
Cow position:
Alignm length: 150
Alignm identity: 109
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 22-232
Cow position:
Alignm length: 219
Alignm identity: 156
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 149, 37

Conread position: 22-232
Cow position:
Alignm length: 215
Alignm identity: 151
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 77, 150

Conread position: 22-233
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 74, 46

Conread position: 22-234
Cow position:
Alignm length: 213
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 22-234
Cow position:
Alignm length: 219
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 144

Conread position: 22-241
Cow position:
Alignm length: 225
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 62

Conread position: 22-241
Cow position:
Alignm length: 224
Alignm identity: 158
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 75, 49

Conread position: 22-241
Cow position:
Alignm length: 225
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 68, 32

Conread position: 22-241
Cow position:
Alignm length: 227
Alignm identity: 168
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 20

Conread position: 22-241
Cow position:
Alignm length: 223
Alignm identity: 168
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 49, 36

Conread position: 22-241
Cow position:
Alignm length: 221
Alignm identity: 151
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 180, 37

Conread position: 22-241
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 37

Conread position: 22-241
Cow position:
Alignm length: 225
Alignm identity: 159
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 57, 148

Conread position: 22-241
Cow position:
Alignm length: 221
Alignm identity: 166
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 48, 84

Conread position: 22-241
Cow position:
Alignm length: 224
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 81, 21

Conread position: 22-243
Cow position:
Alignm length: 226
Alignm identity: 162
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 83, 30

Conread position: 22-244
Cow position:
Alignm length: 227
Alignm identity: 167
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 73, 97

Conread position: 23-232
Cow position:
Alignm length: 214
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 76, 169

Conread position: 23-234
Cow position:
Alignm length: 212
Alignm identity: 146
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 23-241
Cow position:
Alignm length: 223
Alignm identity: 153
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 75, 37

Conread position: 23-241
Cow position:
Alignm length: 219
Alignm identity: 150
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 23-245
Cow position:
Alignm length: 228
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 74, 41

Conread position: 24-234
Cow position:
Alignm length: 213
Alignm identity: 149
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 78, 23

Conread position: 25-234
Cow position:
Alignm length: 212
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 39

Conread position: 26-234
Cow position:
Alignm length: 213
Alignm identity: 148
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 79, 35

Conread position: 35-234
Cow position:
Alignm length: 205
Alignm identity: 148
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 41

Conread position: 36-241
Cow position:
Alignm length: 213
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 41

Conread position: 36-241
Cow position:
Alignm length: 210
Alignm identity: 147
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 69, 93

Conread position: 36-241
Cow position:
Alignm length: 211
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 137

Conread position: 36-241
Cow position:
Alignm length: 208
Alignm identity: 143
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 41

Conread position: 37-234
Cow position:
Alignm length: 203
Alignm identity: 146
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 26, 40

Conread position: 38-234
Cow position:
Alignm length: 201
Alignm identity: 139
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 117

Conread position: 40-232
Cow position:
Alignm length: 194
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 36

Conread position: 41-241
Cow position:
Alignm length: 207
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 36

Conread position: 42-241
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 44-241
Cow position:
Alignm length: 201
Alignm identity: 154
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 63, 9

Conread position: 48-234
Cow position:
Alignm length: 191
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 105

Conread position: 53-231
Cow position:
Alignm length: 184
Alignm identity: 138
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 24, 123

Conread position: 60-234
Cow position:
Alignm length: 180
Alignm identity: 136
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 16, 116

Conread position: 65-241
Cow position:
Alignm length: 182
Alignm identity: 131
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 40, 88

Conread position: 68-241
Cow position:
Alignm length: 178
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 12

Conread position: 70-241
Cow position:
Alignm length: 177
Alignm identity: 128
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 26, 42

Conread position: 72-234
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 100

Conread position: 79-241
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 91

Conread position: 90-241
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 68

Conread position: 96-241
Cow position:
Alignm length: 149
Alignm identity: 109
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 97-241
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 97-241
Cow position:
Alignm length: 145
Alignm identity: 109
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 99-241
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 15

Conread position: 112-241
Cow position:
Alignm length: 130
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 58, 0

Show alignments to all cow chromosomes.