Cow genome map

Conread name: Ss1.1-rcbr0_006154.5

Conread position: 1-167
Cow position:
Alignm length: 170
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 120

Conread position: 1-197
Cow position:
Alignm length: 198
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 94

Conread position: 1-212
Cow position:
Alignm length: 217
Alignm identity: 152
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 68

Conread position: 1-224
Cow position:
Alignm length: 230
Alignm identity: 172
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 24, 70

Conread position: 1-225
Cow position:
Alignm length: 231
Alignm identity: 168
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 14

Conread position: 1-226
Cow position:
Alignm length: 228
Alignm identity: 171
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 24, 167

Conread position: 1-227
Cow position:
Alignm length: 230
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 173

Conread position: 1-227
Cow position:
Alignm length: 230
Alignm identity: 167
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 19, 14

Conread position: 1-230
Cow position:
Alignm length: 233
Alignm identity: 174
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 26, 58

Conread position: 1-231
Cow position:
Alignm length: 233
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 14

Conread position: 1-234
Cow position:
Alignm length: 239
Alignm identity: 166
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 122

Conread position: 1-234
Cow position:
Alignm length: 236
Alignm identity: 164
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 59

Conread position: 1-234
Cow position:
Alignm length: 236
Alignm identity: 169
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 24, 105

Conread position: 1-234
Cow position:
Alignm length: 237
Alignm identity: 175
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 24, 62

Conread position: 1-234
Cow position:
Alignm length: 239
Alignm identity: 163
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 157

Conread position: 1-234
Cow position:
Alignm length: 236
Alignm identity: 168
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 19, 14

Conread position: 1-234
Cow position:
Alignm length: 239
Alignm identity: 175
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 165

Conread position: 1-234
Cow position:
Alignm length: 236
Alignm identity: 171
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 22, 169

Conread position: 1-234
Cow position:
Alignm length: 235
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 76

Conread position: 1-234
Cow position:
Alignm length: 237
Alignm identity: 175
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 22, 98

Conread position: 1-234
Cow position:
Alignm length: 236
Alignm identity: 163
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 8

Conread position: 1-236
Cow position:
Alignm length: 236
Alignm identity: 168
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 1-237
Cow position:
Alignm length: 243
Alignm identity: 173
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 49

Conread position: 1-237
Cow position:
Alignm length: 239
Alignm identity: 175
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 23, 52

Conread position: 1-240
Cow position:
Alignm length: 246
Alignm identity: 170
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 14

Conread position: 1-240
Cow position:
Alignm length: 243
Alignm identity: 175
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 24, 58

Conread position: 1-240
Cow position:
Alignm length: 245
Alignm identity: 187
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 19, 14

Conread position: 1-240
Cow position:
Alignm length: 247
Alignm identity: 171
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 19, 14

Conread position: 1-240
Cow position:
Alignm length: 246
Alignm identity: 179
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 21, 14

Conread position: 1-241
Cow position:
Alignm length: 252
Alignm identity: 175
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 14, 61

Conread position: 1-241
Cow position:
Alignm length: 247
Alignm identity: 181
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 60

Conread position: 1-241
Cow position:
Alignm length: 248
Alignm identity: 184
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position:
Alignm length: 249
Alignm identity: 174
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 72

Conread position: 1-241
Cow position:
Alignm length: 247
Alignm identity: 178
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 14, 68

Conread position: 1-241
Cow position:
Alignm length: 246
Alignm identity: 176
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 26, 165

Conread position: 1-241
Cow position:
Alignm length: 243
Alignm identity: 171
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 24, 98

Conread position: 1-241
Cow position:
Alignm length: 247
Alignm identity: 183
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 24, 58

Conread position: 1-241
Cow position:
Alignm length: 246
Alignm identity: 178
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 24, 165

Conread position: 1-241
Cow position:
Alignm length: 242
Alignm identity: 170
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 23, 102

Conread position: 1-241
Cow position:
Alignm length: 252
Alignm identity: 179
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position:
Alignm length: 246
Alignm identity: 174
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 26, 60

Conread position: 1-241
Cow position:
Alignm length: 248
Alignm identity: 180
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 14, 18

Conread position: 1-241
Cow position:
Alignm length: 246
Alignm identity: 169
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 54

Conread position: 1-241
Cow position:
Alignm length: 246
Alignm identity: 180
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 14, 66

Conread position: 1-242
Cow position:
Alignm length: 248
Alignm identity: 183
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 19, 14

Conread position: 1-242
Cow position:
Alignm length: 248
Alignm identity: 179
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 19, 14

Conread position: 1-242
Cow position:
Alignm length: 248
Alignm identity: 174
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 14, 21

Conread position: 1-242
Cow position:
Alignm length: 249
Alignm identity: 167
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 32, 23

Conread position: 1-242
Cow position:
Alignm length: 247
Alignm identity: 182
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 19, 14

Conread position: 1-242
Cow position:
Alignm length: 248
Alignm identity: 172
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 19, 8

Conread position: 1-243
Cow position:
Alignm length: 249
Alignm identity: 175
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 19, 14

Conread position: 1-246
Cow position:
Alignm length: 251
Alignm identity: 174
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 90

Conread position: 1-258
Cow position:
Alignm length: 263
Alignm identity: 185
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 19, 14

Conread position: 1-261
Cow position:
Alignm length: 274
Alignm identity: 191
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 14, 166

Conread position: 1-262
Cow position:
Alignm length: 268
Alignm identity: 189
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 24, 162

Conread position: 2-241
Cow position:
Alignm length: 245
Alignm identity: 176
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 21, 165

Conread position: 2-241
Cow position:
Alignm length: 242
Alignm identity: 173
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 24, 75

Conread position: 3-233
Cow position:
Alignm length: 234
Alignm identity: 161
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 17, 12

Conread position: 3-233
Cow position:
Alignm length: 233
Alignm identity: 167
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 17, 12

Conread position: 3-233
Cow position:
Alignm length: 236
Alignm identity: 166
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 17, 12

Conread position: 4-232
Cow position:
Alignm length: 232
Alignm identity: 160
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 110

Conread position: 4-241
Cow position:
Alignm length: 240
Alignm identity: 164
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 73

Conread position: 5-167
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 16, 10

Conread position: 5-236
Cow position:
Alignm length: 237
Alignm identity: 169
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 163

Conread position: 5-236
Cow position:
Alignm length: 238
Alignm identity: 180
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 22, 54

Conread position: 5-240
Cow position:
Alignm length: 237
Alignm identity: 165
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 38

Conread position: 5-241
Cow position:
Alignm length: 242
Alignm identity: 173
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 10

Conread position: 5-241
Cow position:
Alignm length: 240
Alignm identity: 172
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 15, 10

Conread position: 6-169
Cow position:
Alignm length: 169
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 54

Conread position: 6-233
Cow position:
Alignm length: 230
Alignm identity: 153
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 55

Conread position: 6-234
Cow position:
Alignm length: 240
Alignm identity: 173
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 9

Conread position: 6-240
Cow position:
Alignm length: 242
Alignm identity: 177
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 9

Conread position: 6-253
Cow position:
Alignm length: 255
Alignm identity: 174
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 14, 9

Conread position: 7-241
Cow position:
Alignm length: 238
Alignm identity: 161
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 75, 17

Conread position: 7-241
Cow position:
Alignm length: 236
Alignm identity: 162
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 18, 12

Conread position: 7-267
Cow position:
Alignm length: 267
Alignm identity: 183
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 8, 16

Conread position: 12-252
Cow position:
Alignm length: 248
Alignm identity: 164
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 21, 66

Conread position: 14-169
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 6, 48

Conread position: 14-193
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 85, 61

Conread position: 14-241
Cow position:
Alignm length: 235
Alignm identity: 174
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 6, 64

Conread position: 14-241
Cow position:
Alignm length: 230
Alignm identity: 170
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 6, 45

Conread position: 16-241
Cow position:
Alignm length: 227
Alignm identity: 164
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 54, 27

Conread position: 16-264
Cow position:
Alignm length: 251
Alignm identity: 168
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 8, 47

Conread position: 18-169
Cow position:
Alignm length: 153
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 18-226
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 6, 152

Conread position: 18-231
Cow position:
Alignm length: 219
Alignm identity: 158
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 7, 130

Conread position: 18-233
Cow position:
Alignm length: 222
Alignm identity: 159
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 6

Conread position: 18-234
Cow position:
Alignm length: 227
Alignm identity: 168
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 7, 42

Conread position: 18-234
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 7, 54

Conread position: 18-239
Cow position:
Alignm length: 228
Alignm identity: 173
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 7, 105

Conread position: 18-241
Cow position:
Alignm length: 230
Alignm identity: 170
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 5, 31

Conread position: 18-241
Cow position:
Alignm length: 227
Alignm identity: 166
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 5, 22

Conread position: 18-241
Cow position:
Alignm length: 230
Alignm identity: 166
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 5, 43

Conread position: 19-234
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 5, 40

Conread position: 19-234
Cow position:
Alignm length: 222
Alignm identity: 152
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 5, 43

Conread position: 19-241
Cow position:
Alignm length: 227
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 5, 44

Conread position: 20-245
Cow position:
Alignm length: 234
Alignm identity: 162
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 5

Conread position: 21-241
Cow position:
Alignm length: 226
Alignm identity: 170
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 47, 102

Conread position: 22-232
Cow position:
Alignm length: 213
Alignm identity: 147
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 65, 28

Conread position: 22-233
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 76, 138

Conread position: 22-234
Cow position:
Alignm length: 218
Alignm identity: 165
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 45, 40

Conread position: 22-237
Cow position:
Alignm length: 219
Alignm identity: 158
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 74, 53

Conread position: 22-239
Cow position:
Alignm length: 218
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 22-241
Cow position:
Alignm length: 220
Alignm identity: 156
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 22-241
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 22-241
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 46, 63

Conread position: 22-241
Cow position:
Alignm length: 225
Alignm identity: 158
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 75, 142

Conread position: 22-241
Cow position:
Alignm length: 220
Alignm identity: 153
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 22-241
Cow position:
Alignm length: 226
Alignm identity: 167
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 44, 145

Conread position: 22-241
Cow position:
Alignm length: 221
Alignm identity: 159
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 74, 46

Conread position: 22-241
Cow position:
Alignm length: 226
Alignm identity: 168
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 40, 137

Conread position: 22-252
Cow position:
Alignm length: 237
Alignm identity: 171
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 74, 147

Conread position: 23-232
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 61

Conread position: 23-236
Cow position:
Alignm length: 219
Alignm identity: 147
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 56, 179

Conread position: 23-241
Cow position:
Alignm length: 221
Alignm identity: 151
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 37

Conread position: 23-241
Cow position:
Alignm length: 224
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 54

Conread position: 23-241
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 47, 36

Conread position: 23-241
Cow position:
Alignm length: 223
Alignm identity: 149
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 76, 37

Conread position: 26-234
Cow position:
Alignm length: 213
Alignm identity: 160
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 73, 32

Conread position: 26-241
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 11, 44

Conread position: 26-260
Cow position:
Alignm length: 242
Alignm identity: 169
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 79, 0

Conread position: 27-242
Cow position:
Alignm length: 217
Alignm identity: 150
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 87, 33

Conread position: 28-233
Cow position:
Alignm length: 208
Alignm identity: 143
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 31, 131

Conread position: 28-241
Cow position:
Alignm length: 222
Alignm identity: 170
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 31, 137

Conread position: 28-241
Cow position:
Alignm length: 216
Alignm identity: 153
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 68, 57

Conread position: 33-241
Cow position:
Alignm length: 216
Alignm identity: 153
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 26

Conread position: 33-241
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 36-234
Cow position:
Alignm length: 201
Alignm identity: 154
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 68, 24

Conread position: 36-241
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 24

Conread position: 44-234
Cow position:
Alignm length: 193
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 25

Conread position: 45-241
Cow position:
Alignm length: 201
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 26, 124

Conread position: 51-228
Cow position:
Alignm length: 182
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 8

Conread position: 52-245
Cow position:
Alignm length: 201
Alignm identity: 152
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 23, 116

Conread position: 55-242
Cow position:
Alignm length: 192
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 105

Conread position: 59-252
Cow position:
Alignm length: 199
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 106

Conread position: 62-240
Cow position:
Alignm length: 184
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 5, 86

Conread position: 66-241
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 31, 89

Conread position: 71-242
Cow position:
Alignm length: 176
Alignm identity: 134
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 25, 94

Conread position: 77-237
Cow position:
Alignm length: 165
Alignm identity: 135
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 28, 91

Conread position: 95-241
Cow position:
Alignm length: 147
Alignm identity: 113
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 101-234
Cow position:
Alignm length: 134
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 112-241
Cow position:
Alignm length: 130
Alignm identity: 102
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 49, 0

Show alignments to all cow chromosomes.