Cow genome map

Conread name: Ss1.1-rcbr0_006154.5

Conread position: 1-169
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 19, 14

Conread position: 1-231
Cow position:
Alignm length: 238
Alignm identity: 172
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 14, 18

Conread position: 1-231
Cow position:
Alignm length: 235
Alignm identity: 167
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 20, 14

Conread position: 1-234
Cow position:
Alignm length: 240
Alignm identity: 173
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 24, 61

Conread position: 1-234
Cow position:
Alignm length: 235
Alignm identity: 164
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 68

Conread position: 1-234
Cow position:
Alignm length: 240
Alignm identity: 166
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 8, 78

Conread position: 1-237
Cow position:
Alignm length: 242
Alignm identity: 182
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 64, 14

Conread position: 1-237
Cow position:
Alignm length: 243
Alignm identity: 174
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 24, 166

Conread position: 1-237
Cow position:
Alignm length: 242
Alignm identity: 166
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 14, 176

Conread position: 1-241
Cow position:
Alignm length: 247
Alignm identity: 174
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 66, 89

Conread position: 1-241
Cow position:
Alignm length: 249
Alignm identity: 185
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 24, 142

Conread position: 1-241
Cow position:
Alignm length: 248
Alignm identity: 193
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 19, 10

Conread position: 1-241
Cow position:
Alignm length: 247
Alignm identity: 184
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position:
Alignm length: 246
Alignm identity: 174
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 14, 58

Conread position: 1-241
Cow position:
Alignm length: 244
Alignm identity: 173
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 26, 64

Conread position: 1-241
Cow position:
Alignm length: 245
Alignm identity: 173
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 24, 168

Conread position: 1-241
Cow position:
Alignm length: 243
Alignm identity: 171
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 19, 14

Conread position: 1-242
Cow position:
Alignm length: 248
Alignm identity: 180
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 24, 71

Conread position: 1-242
Cow position:
Alignm length: 245
Alignm identity: 179
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 84, 14

Conread position: 1-242
Cow position:
Alignm length: 249
Alignm identity: 172
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 19, 14

Conread position: 2-169
Cow position:
Alignm length: 175
Alignm identity: 133
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 18, 13

Conread position: 2-234
Cow position:
Alignm length: 241
Alignm identity: 174
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 13

Conread position: 2-234
Cow position:
Alignm length: 236
Alignm identity: 159
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 63

Conread position: 2-241
Cow position:
Alignm length: 244
Alignm identity: 167
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 99, 73

Conread position: 3-241
Cow position:
Alignm length: 249
Alignm identity: 174
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 17, 58

Conread position: 4-234
Cow position:
Alignm length: 236
Alignm identity: 176
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 16, 169

Conread position: 5-205
Cow position:
Alignm length: 207
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 20, 57

Conread position: 5-223
Cow position:
Alignm length: 221
Alignm identity: 157
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 72

Conread position: 5-240
Cow position:
Alignm length: 244
Alignm identity: 180
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 11, 164

Conread position: 5-241
Cow position:
Alignm length: 243
Alignm identity: 171
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 20, 39

Conread position: 5-241
Cow position:
Alignm length: 245
Alignm identity: 180
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 15, 10

Conread position: 5-242
Cow position:
Alignm length: 244
Alignm identity: 175
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 15, 10

Conread position: 7-236
Cow position:
Alignm length: 235
Alignm identity: 170
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 18, 52

Conread position: 8-241
Cow position:
Alignm length: 242
Alignm identity: 166
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 170

Conread position: 8-242
Cow position:
Alignm length: 246
Alignm identity: 177
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 12, 142

Conread position: 14-241
Cow position:
Alignm length: 237
Alignm identity: 170
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 48

Conread position: 14-241
Cow position:
Alignm length: 233
Alignm identity: 164
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 61

Conread position: 15-241
Cow position:
Alignm length: 231
Alignm identity: 157
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 5, 156

Conread position: 18-158
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 43

Conread position: 18-232
Cow position:
Alignm length: 223
Alignm identity: 163
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 9, 45

Conread position: 18-234
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 7, 148

Conread position: 18-241
Cow position:
Alignm length: 228
Alignm identity: 162
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 87, 149

Conread position: 19-233
Cow position:
Alignm length: 219
Alignm identity: 147
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 5, 56

Conread position: 19-239
Cow position:
Alignm length: 226
Alignm identity: 157
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 5, 59

Conread position: 19-241
Cow position:
Alignm length: 228
Alignm identity: 157
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 5, 42

Conread position: 20-242
Cow position:
Alignm length: 229
Alignm identity: 164
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 5, 52

Conread position: 22-233
Cow position:
Alignm length: 215
Alignm identity: 160
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 80, 53

Conread position: 22-234
Cow position:
Alignm length: 214
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 122, 38

Conread position: 22-241
Cow position:
Alignm length: 220
Alignm identity: 165
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 36, 0

Conread position: 22-241
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 68, 136

Conread position: 22-241
Cow position:
Alignm length: 229
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 17

Conread position: 22-241
Cow position:
Alignm length: 225
Alignm identity: 162
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 40, 11

Conread position: 22-242
Cow position:
Alignm length: 226
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 36

Conread position: 22-244
Cow position:
Alignm length: 227
Alignm identity: 168
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 77, 38

Conread position: 23-241
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 21

Conread position: 24-232
Cow position:
Alignm length: 211
Alignm identity: 146
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 63, 138

Conread position: 24-232
Cow position:
Alignm length: 220
Alignm identity: 156
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 38, 53

Conread position: 25-233
Cow position:
Alignm length: 213
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 36

Conread position: 26-240
Cow position:
Alignm length: 215
Alignm identity: 154
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 26-241
Cow position:
Alignm length: 217
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 36

Conread position: 28-234
Cow position:
Alignm length: 207
Alignm identity: 148
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 30-241
Cow position:
Alignm length: 220
Alignm identity: 159
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 9, 146

Conread position: 38-241
Cow position:
Alignm length: 209
Alignm identity: 157
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 34, 94

Conread position: 43-234
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 48-237
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 57, 32

Conread position: 51-233
Cow position:
Alignm length: 187
Alignm identity: 141
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 11

Conread position: 62-241
Cow position:
Alignm length: 183
Alignm identity: 140
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 9, 19

Conread position: 66-241
Cow position:
Alignm length: 180
Alignm identity: 134
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 29, 54

Conread position: 90-234
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 95-233
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 97-234
Cow position:
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 73

Conread position: 97-241
Cow position:
Alignm length: 145
Alignm identity: 111
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 97-253
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 98-242
Cow position:
Alignm length: 145
Alignm identity: 111
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 113-241
Cow position:
Alignm length: 130
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 8, 49

Conread position: 113-242
Cow position:
Alignm length: 130
Alignm identity: 103
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 23, 0

Show alignments to all cow chromosomes.