Cow genome map


           Conread name:
           Ss1.1-rcbr0_006154.5
        

               Conread position:
               1-168
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               19, 14
               

               Conread position:
               1-177
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               24, 67
               

               Conread position:
               1-225
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               24, 157
               

               Conread position:
               1-227
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               19, 14
               

               Conread position:
               1-234
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               22, 173
               

               Conread position:
               1-234
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               24, 173
               

               Conread position:
               1-234
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               19, 172
               

               Conread position:
               1-234
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               19, 57
               

               Conread position:
               1-236
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               19, 14
               

               Conread position:
               1-237
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               24, 53
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               24, 60
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               14, 58
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               15, 164
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               23, 59
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               19, 14
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               24, 76
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               22, 177
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               24, 62
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               19, 33
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               183
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               19, 90
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               14, 22
               

               Conread position:
               1-242
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               26, 107
               

               Conread position:
               1-242
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               22, 69
               

               Conread position:
               1-247
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               70, 16
               

               Conread position:
               2-182
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               18, 13
               

               Conread position:
               2-209
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               23, 42
               

               Conread position:
               2-234
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               14, 174
               

               Conread position:
               3-234
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               21, 89
               

               Conread position:
               3-241
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               12, 55
               

               Conread position:
               4-263
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               19, 50
               

               Conread position:
               5-241
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               22, 163
               

               Conread position:
               5-241
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               20, 110
               

               Conread position:
               5-241
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               10, 14
               

               Conread position:
               5-242
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               19, 60
               

               Conread position:
               6-209
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               17, 34
               

               Conread position:
               6-234
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               17, 9
               

               Conread position:
               6-241
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               14, 9
               

               Conread position:
               7-241
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               13, 43
               

               Conread position:
               7-260
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               18, 55
               

               Conread position:
               8-241
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               82, 16
               

               Conread position:
               11-234
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               51, 13
               

               Conread position:
               11-234
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 50
               

               Conread position:
               14-234
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               48, 8
               

               Conread position:
               14-234
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               6, 42
               

               Conread position:
               14-242
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               13, 163
               

               Conread position:
               14-242
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               6, 58
               

               Conread position:
               16-234
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               83, 8
               

               Conread position:
               17-241
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               56, 45
               

               Conread position:
               18-240
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               7, 66
               

               Conread position:
               18-241
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               7, 51
               

               Conread position:
               18-241
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               7, 41
               

               Conread position:
               18-241
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               75, 128
               

               Conread position:
               19-241
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               5, 162
               

               Conread position:
               19-241
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               5, 41
               

               Conread position:
               19-242
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               5, 45
               

               Conread position:
               19-246
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               59, 49
               

               Conread position:
               20-241
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               5, 29
               

               Conread position:
               21-216
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               43, 153
               

               Conread position:
               22-169
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               77, 40
               

               Conread position:
               22-233
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               46, 40
               

               Conread position:
               22-234
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               69, 27
               

               Conread position:
               22-241
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               43, 150
               

               Conread position:
               22-241
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               81, 67
               

               Conread position:
               22-241
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               87, 150
               

               Conread position:
               23-239
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               75, 53
               

               Conread position:
               23-245
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               127, 49
               

               Conread position:
               23-265
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               79, 41
               

               Conread position:
               24-226
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               46, 147
               

               Conread position:
               25-241
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               73, 14
               

               Conread position:
               25-241
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               80, 33
               

               Conread position:
               26-232
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               74, 18
               

               Conread position:
               26-234
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               45, 34
               

               Conread position:
               26-241
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               107, 16
               

               Conread position:
               26-242
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               62, 28
               

               Conread position:
               31-241
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               73, 31
               

               Conread position:
               33-241
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               34, 26
               

               Conread position:
               34-239
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               36-241
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               41, 25
               

               Conread position:
               36-241
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               113, 28
               

               Conread position:
               38-241
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               58, 124
               

               Conread position:
               50-234
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               53, 25
               

               Conread position:
               54-234
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               81, 51
               

               Conread position:
               75-242
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               24, 99
               

               Conread position:
               76-242
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               134, 74
               

               Conread position:
               79-241
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               23, 79
               

               Conread position:
               97-233
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               101-241
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               112-241
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               113-241
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               5, 0
               
Show alignments to all cow chromosomes.