Cow genome map

Conread name: Ss1.1-rcbr0_006154.5

Conread position: 1-169
Cow position:
Alignm length: 175
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 34

Conread position: 1-170
Cow position:
Alignm length: 176
Alignm identity: 134
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 22, 58

Conread position: 1-209
Cow position:
Alignm length: 215
Alignm identity: 158
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 24, 69

Conread position: 1-217
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 18, 14

Conread position: 1-218
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 14

Conread position: 1-225
Cow position:
Alignm length: 230
Alignm identity: 167
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 60

Conread position: 1-232
Cow position:
Alignm length: 238
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 17

Conread position: 1-233
Cow position:
Alignm length: 241
Alignm identity: 164
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 14

Conread position: 1-233
Cow position:
Alignm length: 238
Alignm identity: 176
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 20, 59

Conread position: 1-233
Cow position:
Alignm length: 238
Alignm identity: 178
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 24, 169

Conread position: 1-233
Cow position:
Alignm length: 242
Alignm identity: 182
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 19, 14

Conread position: 1-233
Cow position:
Alignm length: 235
Alignm identity: 166
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 54

Conread position: 1-234
Cow position:
Alignm length: 235
Alignm identity: 160
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 24, 17

Conread position: 1-234
Cow position:
Alignm length: 240
Alignm identity: 171
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 120

Conread position: 1-234
Cow position:
Alignm length: 245
Alignm identity: 172
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 47

Conread position: 1-234
Cow position:
Alignm length: 241
Alignm identity: 169
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 19, 14

Conread position: 1-234
Cow position:
Alignm length: 241
Alignm identity: 169
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 19, 14

Conread position: 1-235
Cow position:
Alignm length: 236
Alignm identity: 168
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 22, 85

Conread position: 1-239
Cow position:
Alignm length: 245
Alignm identity: 175
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 22, 173

Conread position: 1-240
Cow position:
Alignm length: 242
Alignm identity: 175
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position:
Alignm length: 243
Alignm identity: 176
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 26, 73

Conread position: 1-241
Cow position:
Alignm length: 243
Alignm identity: 175
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 24, 71

Conread position: 1-241
Cow position:
Alignm length: 247
Alignm identity: 185
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 18, 14

Conread position: 1-241
Cow position:
Alignm length: 242
Alignm identity: 167
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 24, 80

Conread position: 1-241
Cow position:
Alignm length: 246
Alignm identity: 181
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 17

Conread position: 1-241
Cow position:
Alignm length: 248
Alignm identity: 180
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 24, 58

Conread position: 1-241
Cow position:
Alignm length: 252
Alignm identity: 174
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 29

Conread position: 1-241
Cow position:
Alignm length: 248
Alignm identity: 175
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 24, 167

Conread position: 1-241
Cow position:
Alignm length: 243
Alignm identity: 179
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position:
Alignm length: 243
Alignm identity: 161
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position:
Alignm length: 248
Alignm identity: 180
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 24, 172

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 168
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 1-241
Cow position:
Alignm length: 247
Alignm identity: 170
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 24, 90

Conread position: 1-241
Cow position:
Alignm length: 253
Alignm identity: 174
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 74

Conread position: 1-241
Cow position:
Alignm length: 250
Alignm identity: 173
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 14

Conread position: 1-241
Cow position:
Alignm length: 248
Alignm identity: 177
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position:
Alignm length: 244
Alignm identity: 173
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 24, 72

Conread position: 1-241
Cow position:
Alignm length: 242
Alignm identity: 170
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 42

Conread position: 1-241
Cow position:
Alignm length: 242
Alignm identity: 180
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 24, 58

Conread position: 1-241
Cow position:
Alignm length: 247
Alignm identity: 180
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 24, 42

Conread position: 1-241
Cow position:
Alignm length: 247
Alignm identity: 177
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 19, 8

Conread position: 1-242
Cow position:
Alignm length: 243
Alignm identity: 174
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 142, 17

Conread position: 1-242
Cow position:
Alignm length: 247
Alignm identity: 188
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 26, 58

Conread position: 1-242
Cow position:
Alignm length: 248
Alignm identity: 177
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 14

Conread position: 1-245
Cow position:
Alignm length: 248
Alignm identity: 183
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 19, 14

Conread position: 1-246
Cow position:
Alignm length: 248
Alignm identity: 179
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 24, 62

Conread position: 1-253
Cow position:
Alignm length: 257
Alignm identity: 178
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 14

Conread position: 1-258
Cow position:
Alignm length: 264
Alignm identity: 194
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 22, 171

Conread position: 2-234
Cow position:
Alignm length: 234
Alignm identity: 178
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 25, 56

Conread position: 2-237
Cow position:
Alignm length: 243
Alignm identity: 177
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 13

Conread position: 2-241
Cow position:
Alignm length: 243
Alignm identity: 182
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 18, 13

Conread position: 2-241
Cow position:
Alignm length: 247
Alignm identity: 180
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 18, 13

Conread position: 2-242
Cow position:
Alignm length: 250
Alignm identity: 179
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 47

Conread position: 3-241
Cow position:
Alignm length: 246
Alignm identity: 174
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 12, 164

Conread position: 3-244
Cow position:
Alignm length: 243
Alignm identity: 180
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 24, 56

Conread position: 4-241
Cow position:
Alignm length: 244
Alignm identity: 167
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 155

Conread position: 5-164
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 16, 10

Conread position: 5-232
Cow position:
Alignm length: 232
Alignm identity: 176
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 15, 10

Conread position: 5-234
Cow position:
Alignm length: 240
Alignm identity: 166
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 16, 10

Conread position: 5-240
Cow position:
Alignm length: 248
Alignm identity: 176
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 170

Conread position: 5-241
Cow position:
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 10

Conread position: 7-241
Cow position:
Alignm length: 236
Alignm identity: 170
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 89, 13

Conread position: 8-234
Cow position:
Alignm length: 228
Alignm identity: 168
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 17, 61

Conread position: 8-241
Cow position:
Alignm length: 235
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 25

Conread position: 8-258
Cow position:
Alignm length: 256
Alignm identity: 187
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 17, 61

Conread position: 13-241
Cow position:
Alignm length: 231
Alignm identity: 169
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 8, 105

Conread position: 14-233
Cow position:
Alignm length: 227
Alignm identity: 164
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 6, 52

Conread position: 14-233
Cow position:
Alignm length: 225
Alignm identity: 161
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 11, 47

Conread position: 14-241
Cow position:
Alignm length: 232
Alignm identity: 161
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 7, 43

Conread position: 14-269
Cow position:
Alignm length: 260
Alignm identity: 185
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 6, 59

Conread position: 17-169
Cow position:
Alignm length: 156
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 17-241
Cow position:
Alignm length: 229
Alignm identity: 166
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 83, 54

Conread position: 17-241
Cow position:
Alignm length: 228
Alignm identity: 164
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 7, 46

Conread position: 18-169
Cow position:
Alignm length: 156
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 18-169
Cow position:
Alignm length: 157
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 18-209
Cow position:
Alignm length: 196
Alignm identity: 138
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 7, 149

Conread position: 18-232
Cow position:
Alignm length: 220
Alignm identity: 162
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 45, 7

Conread position: 18-233
Cow position:
Alignm length: 221
Alignm identity: 158
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 83, 38

Conread position: 18-241
Cow position:
Alignm length: 228
Alignm identity: 175
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 52, 157

Conread position: 18-241
Cow position:
Alignm length: 231
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 6, 15

Conread position: 18-241
Cow position:
Alignm length: 232
Alignm identity: 158
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 6, 149

Conread position: 18-241
Cow position:
Alignm length: 227
Alignm identity: 159
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 6, 43

Conread position: 18-242
Cow position:
Alignm length: 231
Alignm identity: 166
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 6, 58

Conread position: 18-245
Cow position:
Alignm length: 237
Alignm identity: 165
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 12, 169

Conread position: 19-234
Cow position:
Alignm length: 221
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 44

Conread position: 19-241
Cow position:
Alignm length: 230
Alignm identity: 162
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 5, 62

Conread position: 20-234
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 6, 148

Conread position: 20-242
Cow position:
Alignm length: 227
Alignm identity: 156
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 53, 64

Conread position: 22-161
Cow position:
Alignm length: 144
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 22-233
Cow position:
Alignm length: 216
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 54

Conread position: 22-234
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 75, 58

Conread position: 22-234
Cow position:
Alignm length: 218
Alignm identity: 159
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 40, 50

Conread position: 22-241
Cow position:
Alignm length: 223
Alignm identity: 167
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 76, 32

Conread position: 22-241
Cow position:
Alignm length: 225
Alignm identity: 156
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 38, 150

Conread position: 22-241
Cow position:
Alignm length: 222
Alignm identity: 159
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 73, 42

Conread position: 22-241
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 22-241
Cow position:
Alignm length: 224
Alignm identity: 165
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 37, 137

Conread position: 22-241
Cow position:
Alignm length: 223
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 88, 39

Conread position: 22-241
Cow position:
Alignm length: 223
Alignm identity: 166
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 50, 59

Conread position: 22-241
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 41, 57

Conread position: 22-241
Cow position:
Alignm length: 229
Alignm identity: 174
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 55, 152

Conread position: 22-242
Cow position:
Alignm length: 221
Alignm identity: 166
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 41, 0

Conread position: 22-242
Cow position:
Alignm length: 224
Alignm identity: 159
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 145

Conread position: 22-245
Cow position:
Alignm length: 230
Alignm identity: 163
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 18, 50

Conread position: 22-254
Cow position:
Alignm length: 240
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 56

Conread position: 23-234
Cow position:
Alignm length: 215
Alignm identity: 158
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 41, 35

Conread position: 23-241
Cow position:
Alignm length: 223
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 35

Conread position: 23-241
Cow position:
Alignm length: 223
Alignm identity: 171
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 74, 35

Conread position: 23-242
Cow position:
Alignm length: 226
Alignm identity: 156
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 56, 41

Conread position: 25-232
Cow position:
Alignm length: 209
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 128

Conread position: 25-234
Cow position:
Alignm length: 210
Alignm identity: 140
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 142, 0

Conread position: 25-237
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 74, 35

Conread position: 25-241
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 54, 145

Conread position: 26-233
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 131

Conread position: 26-234
Cow position:
Alignm length: 210
Alignm identity: 153
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 40, 23

Conread position: 27-241
Cow position:
Alignm length: 215
Alignm identity: 150
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 126, 0

Conread position: 27-245
Cow position:
Alignm length: 224
Alignm identity: 154
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 109

Conread position: 29-241
Cow position:
Alignm length: 220
Alignm identity: 168
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 74, 30

Conread position: 33-169
Cow position:
Alignm length: 141
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 33-241
Cow position:
Alignm length: 215
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 47

Conread position: 34-234
Cow position:
Alignm length: 206
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 26

Conread position: 36-242
Cow position:
Alignm length: 212
Alignm identity: 147
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 31, 26

Conread position: 37-241
Cow position:
Alignm length: 208
Alignm identity: 144
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 63, 134

Conread position: 42-241
Cow position:
Alignm length: 205
Alignm identity: 145
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 59, 29

Conread position: 49-267
Cow position:
Alignm length: 224
Alignm identity: 158
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 18, 28

Conread position: 51-234
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 45, 24

Conread position: 61-234
Cow position:
Alignm length: 179
Alignm identity: 136
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 17, 89

Conread position: 70-248
Cow position:
Alignm length: 183
Alignm identity: 130
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 91

Conread position: 83-241
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 29, 81

Conread position: 90-241
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 97-241
Cow position:
Alignm length: 145
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 98-241
Cow position:
Alignm length: 144
Alignm identity: 111
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 101-233
Cow position:
Alignm length: 133
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 101-241
Cow position:
Alignm length: 141
Alignm identity: 116
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 105-241
Cow position:
Alignm length: 138
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 107-241
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 42, 23

Conread position: 111-261
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 140, 42

Conread position: 119-240
Cow position:
Alignm length: 123
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 21, 5

Show alignments to all cow chromosomes.