Cow genome map
| Conread name: | Ss1.1-rcbr0_006154.5 |
| Conread position: | 1-169 |
| Cow position: | chr3:76922655-76922825 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 34 |
| Conread position: | 1-170 |
| Cow position: | chr3:58968895-58969064 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 22, 58 |
| Conread position: | 1-209 |
| Cow position: | chr3:74079628-74079834 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 24, 69 |
| Conread position: | 1-217 |
| Cow position: | chr3:75711314-75711108 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 18, 14 |
| Conread position: | 1-218 |
| Cow position: | chr3:49218306-49218519 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-225 |
| Cow position: | chr3:17222134-17222354 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 24, 60 |
| Conread position: | 1-232 |
| Cow position: | chr3:46350681-46350445 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 17 |
| Conread position: | 1-233 |
| Cow position: | chr3:49460918-49461152 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 14 |
| Conread position: | 1-233 |
| Cow position: | chr3:53222021-53221799 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 20, 59 |
| Conread position: | 1-233 |
| Cow position: | chr3:54946139-54945909 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 24, 169 |
| Conread position: | 1-233 |
| Cow position: | chr3:70609640-70609407 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-233 |
| Cow position: | chr3:75080771-75080551 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 54 |
| Conread position: | 1-234 |
| Cow position: | chr3:3738490-3738268 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 24, 17 |
| Conread position: | 1-234 |
| Cow position: | chr3:45534285-45534516 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 22, 120 |
| Conread position: | 1-234 |
| Cow position: | chr3:53592681-53592917 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 47 |
| Conread position: | 1-234 |
| Cow position: | chr3:71497130-71497361 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-234 |
| Cow position: | chr3:80072137-80071900 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-235 |
| Cow position: | chr3:17936831-17937056 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 1-239 |
| Cow position: | chr3:23105354-23105587 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 22, 173 |
| Conread position: | 1-240 |
| Cow position: | chr3:7331115-7331339 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-241 |
| Cow position: | chr3:5850921-5851151 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 26, 73 |
| Conread position: | 1-241 |
| Cow position: | chr3:10347362-10347132 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 24, 71 |
| Conread position: | 1-241 |
| Cow position: | chr3:13353372-13353134 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 18, 14 |
| Conread position: | 1-241 |
| Cow position: | chr3:16752250-16752476 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 24, 80 |
| Conread position: | 1-241 |
| Cow position: | chr3:26066006-26065778 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 24, 17 |
| Conread position: | 1-241 |
| Cow position: | chr3:26219043-26219285 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 24, 58 |
| Conread position: | 1-241 |
| Cow position: | chr3:26920916-26920673 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 29 |
| Conread position: | 1-241 |
| Cow position: | chr3:39969855-39970095 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 24, 167 |
| Conread position: | 1-241 |
| Cow position: | chr3:52608190-52607960 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-241 |
| Cow position: | chr3:55106431-55106666 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-241 |
| Cow position: | chr3:56059819-56059584 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 24, 172 |
| Conread position: | 1-241 |
| Cow position: | chr3:56301346-56301571 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-241 |
| Cow position: | chr3:59610710-59610947 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 24, 90 |
| Conread position: | 1-241 |
| Cow position: | chr3:61857517-61857273 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 74 |
| Conread position: | 1-241 |
| Cow position: | chr3:67929252-67929491 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 14 |
| Conread position: | 1-241 |
| Cow position: | chr3:72676099-72675864 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-241 |
| Cow position: | chr3:73443081-73443310 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 1-241 |
| Cow position: | chr3:74234194-74233972 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 42 |
| Conread position: | 1-241 |
| Cow position: | chr3:78077193-78076966 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 24, 58 |
| Conread position: | 1-241 |
| Cow position: | chr3:80564974-80564737 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 24, 42 |
| Conread position: | 1-241 |
| Cow position: | chr3:81277690-81277926 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 19, 8 |
| Conread position: | 1-242 |
| Cow position: | chr3:26904114-26903891 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 142, 17 |
| Conread position: | 1-242 |
| Cow position: | chr3:50768687-50768454 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 26, 58 |
| Conread position: | 1-242 |
| Cow position: | chr3:53790528-53790765 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-245 |
| Cow position: | chr3:78092503-78092737 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-246 |
| Cow position: | chr3:74533357-74533119 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 24, 62 |
| Conread position: | 1-253 |
| Cow position: | chr3:45647688-45647440 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-258 |
| Cow position: | chr3:49327952-49327696 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 194 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 22, 171 |
| Conread position: | 2-234 |
| Cow position: | chr3:70896051-70895830 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 25, 56 |
| Conread position: | 2-237 |
| Cow position: | chr3:9641574-9641345 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 19, 13 |
| Conread position: | 2-241 |
| Cow position: | chr3:15506456-15506224 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 18, 13 |
| Conread position: | 2-241 |
| Cow position: | chr3:55835814-55836052 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 18, 13 |
| Conread position: | 2-242 |
| Cow position: | chr3:62826611-62826847 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 13, 47 |
| Conread position: | 3-241 |
| Cow position: | chr3:34937854-34937617 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 12, 164 |
| Conread position: | 3-244 |
| Cow position: | chr3:11063380-11063153 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 24, 56 |
| Conread position: | 4-241 |
| Cow position: | chr3:2216374-2216136 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 155 |
| Conread position: | 5-164 |
| Cow position: | chr3:19585868-19585704 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 16, 10 |
| Conread position: | 5-232 |
| Cow position: | chr3:70565734-70565952 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 15, 10 |
| Conread position: | 5-234 |
| Cow position: | chr3:61539810-61539580 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 16, 10 |
| Conread position: | 5-240 |
| Cow position: | chr3:38864129-38863895 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 20, 170 |
| Conread position: | 5-241 |
| Cow position: | chr3:44932520-44932285 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 10 |
| Conread position: | 7-241 |
| Cow position: | chr3:83201525-83201751 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 89, 13 |
| Conread position: | 8-234 |
| Cow position: | chr3:68881115-68881332 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 17, 61 |
| Conread position: | 8-241 |
| Cow position: | chr3:19006655-19006444 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 7, 25 |
| Conread position: | 8-258 |
| Cow position: | chr3:68708007-68708252 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 17, 61 |
| Conread position: | 13-241 |
| Cow position: | chr3:17450942-17451157 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 8, 105 |
| Conread position: | 14-233 |
| Cow position: | chr3:2675025-2674814 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 6, 52 |
| Conread position: | 14-233 |
| Cow position: | chr3:30463174-30463381 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 11, 47 |
| Conread position: | 14-241 |
| Cow position: | chr3:57764218-57764000 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 43 |
| Conread position: | 14-269 |
| Cow position: | chr3:17447616-17447859 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 6, 59 |
| Conread position: | 17-169 |
| Cow position: | chr3:68616332-68616487 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 17-241 |
| Cow position: | chr3:29813236-29813020 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 83, 54 |
| Conread position: | 17-241 |
| Cow position: | chr3:78201260-78201044 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 7, 46 |
| Conread position: | 18-169 |
| Cow position: | chr3:22232659-22232814 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 18-169 |
| Cow position: | chr3:74409476-74409320 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 18-209 |
| Cow position: | chr3:8061120-8060932 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 7, 149 |
| Conread position: | 18-232 |
| Cow position: | chr3:21340969-21341180 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 45, 7 |
| Conread position: | 18-233 |
| Cow position: | chr3:73395107-73394901 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 83, 38 |
| Conread position: | 18-241 |
| Cow position: | chr3:23169073-23169293 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 52, 157 |
| Conread position: | 18-241 |
| Cow position: | chr3:43233497-43233280 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 6, 15 |
| Conread position: | 18-241 |
| Cow position: | chr3:65969158-65968931 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 6, 149 |
| Conread position: | 18-241 |
| Cow position: | chr3:73759525-73759743 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 6, 43 |
| Conread position: | 18-242 |
| Cow position: | chr3:69416790-69417012 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 6, 58 |
| Conread position: | 18-245 |
| Cow position: | chr3:12705552-12705787 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 12, 169 |
| Conread position: | 19-234 |
| Cow position: | chr3:84000603-84000396 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 5, 44 |
| Conread position: | 19-241 |
| Cow position: | chr3:5416230-5416454 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 5, 62 |
| Conread position: | 20-234 |
| Cow position: | chr3:73590005-73590215 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 6, 148 |
| Conread position: | 20-242 |
| Cow position: | chr3:49231006-49230786 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 53, 64 |
| Conread position: | 22-161 |
| Cow position: | chr3:10958254-10958397 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 22-233 |
| Cow position: | chr3:64280945-64281151 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 77, 54 |
| Conread position: | 22-234 |
| Cow position: | chr3:27274517-27274317 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 75, 58 |
| Conread position: | 22-234 |
| Cow position: | chr3:83815801-83816009 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 40, 50 |
| Conread position: | 22-241 |
| Cow position: | chr3:2396793-2397006 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 76, 32 |
| Conread position: | 22-241 |
| Cow position: | chr3:4031960-4031745 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 38, 150 |
| Conread position: | 22-241 |
| Cow position: | chr3:5374318-5374110 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 73, 42 |
| Conread position: | 22-241 |
| Cow position: | chr3:7337796-7337997 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 22-241 |
| Cow position: | chr3:13507454-13507240 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 37, 137 |
| Conread position: | 22-241 |
| Cow position: | chr3:19789128-19789342 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 88, 39 |
| Conread position: | 22-241 |
| Cow position: | chr3:29887435-29887647 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 50, 59 |
| Conread position: | 22-241 |
| Cow position: | chr3:65800578-65800370 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 41, 57 |
| Conread position: | 22-241 |
| Cow position: | chr3:77496815-77496594 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 55, 152 |
| Conread position: | 22-242 |
| Cow position: | chr3:48363062-48362857 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 22-242 |
| Cow position: | chr3:56476668-56476458 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 42, 145 |
| Conread position: | 22-245 |
| Cow position: | chr3:29807453-29807234 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 18, 50 |
| Conread position: | 22-254 |
| Cow position: | chr3:11711951-11711716 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 38, 56 |
| Conread position: | 23-234 |
| Cow position: | chr3:9843572-9843367 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 41, 35 |
| Conread position: | 23-241 |
| Cow position: | chr3:5097192-5096981 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 78, 35 |
| Conread position: | 23-241 |
| Cow position: | chr3:53150310-53150104 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 74, 35 |
| Conread position: | 23-242 |
| Cow position: | chr3:12711930-12712147 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 56, 41 |
| Conread position: | 25-232 |
| Cow position: | chr3:74878606-74878804 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 128 |
| Conread position: | 25-234 |
| Cow position: | chr3:61144082-61143877 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 25-237 |
| Cow position: | chr3:31046968-31047169 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 74, 35 |
| Conread position: | 25-241 |
| Cow position: | chr3:67704529-67704317 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 54, 145 |
| Conread position: | 26-233 |
| Cow position: | chr3:39171498-39171699 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 131 |
| Conread position: | 26-234 |
| Cow position: | chr3:525328-525138 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 40, 23 |
| Conread position: | 27-241 |
| Cow position: | chr3:83474725-83474524 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 27-245 |
| Cow position: | chr3:78945850-78946064 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 109 |
| Conread position: | 29-241 |
| Cow position: | chr3:35283110-35283321 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 74, 30 |
| Conread position: | 33-169 |
| Cow position: | chr3:34294307-34294447 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 33-241 |
| Cow position: | chr3:57754501-57754707 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 47 |
| Conread position: | 34-234 |
| Cow position: | chr3:11020092-11019902 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 69, 26 |
| Conread position: | 36-242 |
| Cow position: | chr3:33698703-33698497 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 31, 26 |
| Conread position: | 37-241 |
| Cow position: | chr3:63860918-63861124 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 63, 134 |
| Conread position: | 42-241 |
| Cow position: | chr3:50258894-50259092 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 59, 29 |
| Conread position: | 49-267 |
| Cow position: | chr3:79208036-79208254 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 18, 28 |
| Conread position: | 51-234 |
| Cow position: | chr3:31501309-31501131 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 45, 24 |
| Conread position: | 61-234 |
| Cow position: | chr3:2506525-2506697 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 17, 89 |
| Conread position: | 70-248 |
| Cow position: | chr3:26960649-26960825 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 33, 91 |
| Conread position: | 83-241 |
| Cow position: | chr3:58383894-58383745 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 29, 81 |
| Conread position: | 90-241 |
| Cow position: | chr3:81940173-81940028 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 97-241 |
| Cow position: | chr3:71430297-71430435 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 98-241 |
| Cow position: | chr3:53113082-53112946 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 101-233 |
| Cow position: | chr3:5082732-5082857 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 101-241 |
| Cow position: | chr3:18607278-18607146 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 105-241 |
| Cow position: | chr3:23215670-23215807 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 107-241 |
| Cow position: | chr3:11333411-11333541 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 42, 23 |
| Conread position: | 111-261 |
| Cow position: | chr3:79905022-79905166 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 140, 42 |
| Conread position: | 119-240 |
| Cow position: | chr3:15153531-15153417 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 21, 5 |
Show alignments to all cow chromosomes.