Cow genome map
| Conread name: | Ss1.1-rcbr0_006154.5 |
| Conread position: | 1-209 |
| Cow position: | chr4:3421647-3421448 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 22, 109 |
| Conread position: | 1-214 |
| Cow position: | chr4:21232849-21233058 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 24, 47 |
| Conread position: | 1-231 |
| Cow position: | chr4:3689729-3689511 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 31, 71 |
| Conread position: | 1-231 |
| Cow position: | chr4:17774325-17774547 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 163 |
| Conread position: | 1-231 |
| Cow position: | chr4:58880936-58881164 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 26, 176 |
| Conread position: | 1-233 |
| Cow position: | chr4:11332122-11331890 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 12, 74 |
| Conread position: | 1-233 |
| Cow position: | chr4:19142301-19142089 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 24, 58 |
| Conread position: | 1-233 |
| Cow position: | chr4:21065061-21064839 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 42 |
| Conread position: | 1-233 |
| Cow position: | chr4:38944233-38944464 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 96, 21 |
| Conread position: | 1-234 |
| Cow position: | chr4:12049272-12049042 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 24, 60 |
| Conread position: | 1-234 |
| Cow position: | chr4:16762701-16762932 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-234 |
| Cow position: | chr4:19463521-19463291 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 23, 68 |
| Conread position: | 1-234 |
| Cow position: | chr4:21531618-21531842 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 15, 168 |
| Conread position: | 1-234 |
| Cow position: | chr4:28772042-28772267 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-234 |
| Cow position: | chr4:42423780-42424002 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 24, 60 |
| Conread position: | 1-235 |
| Cow position: | chr4:19597299-19597517 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 24, 63 |
| Conread position: | 1-236 |
| Cow position: | chr4:47290103-47289868 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 20, 16 |
| Conread position: | 1-237 |
| Cow position: | chr4:31136780-31136553 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 24, 17 |
| Conread position: | 1-238 |
| Cow position: | chr4:13344563-13344337 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-239 |
| Cow position: | chr4:19700123-19699895 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 22, 58 |
| Conread position: | 1-240 |
| Cow position: | chr4:38935384-38935152 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 194 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 20, 14 |
| Conread position: | 1-241 |
| Cow position: | chr4:3283422-3283656 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 24, 71 |
| Conread position: | 1-241 |
| Cow position: | chr4:3340977-3340744 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 23, 62 |
| Conread position: | 1-241 |
| Cow position: | chr4:3687947-3687721 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 26, 70 |
| Conread position: | 1-241 |
| Cow position: | chr4:4186144-4185914 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 80, 15 |
| Conread position: | 1-241 |
| Cow position: | chr4:13693647-13693885 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 22, 165 |
| Conread position: | 1-241 |
| Cow position: | chr4:19497238-19497457 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-241 |
| Cow position: | chr4:20139490-20139727 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-241 |
| Cow position: | chr4:21257100-21257336 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 159 |
| Conread position: | 1-241 |
| Cow position: | chr4:23847026-23847258 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 24, 14 |
| Conread position: | 1-241 |
| Cow position: | chr4:27530143-27529906 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 24, 59 |
| Conread position: | 1-241 |
| Cow position: | chr4:34337244-34337477 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 24, 119 |
| Conread position: | 1-241 |
| Cow position: | chr4:41602874-41602641 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 1-241 |
| Cow position: | chr4:48152346-48152575 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 23, 58 |
| Conread position: | 1-241 |
| Cow position: | chr4:48486019-48485793 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 18, 14 |
| Conread position: | 1-241 |
| Cow position: | chr4:51851231-51850989 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 22, 159 |
| Conread position: | 1-241 |
| Cow position: | chr4:51899031-51898796 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 71, 24 |
| Conread position: | 1-241 |
| Cow position: | chr4:53100826-53100598 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 10 |
| Conread position: | 1-241 |
| Cow position: | chr4:54455317-54455551 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 20, 8 |
| Conread position: | 1-242 |
| Cow position: | chr4:11194211-11193974 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 60, 114 |
| Conread position: | 1-242 |
| Cow position: | chr4:17111848-17112085 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-242 |
| Cow position: | chr4:38952578-38952350 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-245 |
| Cow position: | chr4:12903846-12903606 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 26, 60 |
| Conread position: | 1-245 |
| Cow position: | chr4:26323765-26323521 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 32, 14 |
| Conread position: | 1-251 |
| Cow position: | chr4:28839645-28839409 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 72, 57 |
| Conread position: | 2-161 |
| Cow position: | chr4:25537571-25537407 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 2-213 |
| Cow position: | chr4:33096957-33097159 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 64, 16 |
| Conread position: | 2-233 |
| Cow position: | chr4:62472103-62471869 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 22, 57 |
| Conread position: | 2-241 |
| Cow position: | chr4:20299299-20299063 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 23, 61 |
| Conread position: | 2-241 |
| Cow position: | chr4:22138198-22138443 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 22, 178 |
| Conread position: | 2-241 |
| Cow position: | chr4:42921833-42922053 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 17, 13 |
| Conread position: | 2-241 |
| Cow position: | chr4:47348854-47348624 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 18, 71 |
| Conread position: | 3-241 |
| Cow position: | chr4:25879418-25879188 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 12, 16 |
| Conread position: | 4-212 |
| Cow position: | chr4:17186328-17186535 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 31 |
| Conread position: | 4-241 |
| Cow position: | chr4:19584739-19584497 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 60 |
| Conread position: | 4-241 |
| Cow position: | chr4:65825820-65826062 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 83 |
| Conread position: | 5-209 |
| Cow position: | chr4:34022564-34022766 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 10 |
| Conread position: | 5-229 |
| Cow position: | chr4:51728100-51727877 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 10, 66 |
| Conread position: | 5-236 |
| Cow position: | chr4:24458082-24458300 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 22, 105 |
| Conread position: | 5-238 |
| Cow position: | chr4:62983532-62983758 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 20, 72 |
| Conread position: | 5-241 |
| Cow position: | chr4:19097309-19097084 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 18, 76 |
| Conread position: | 5-241 |
| Cow position: | chr4:61972442-61972682 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 15, 10 |
| Conread position: | 6-241 |
| Cow position: | chr4:42673196-42672964 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 9, 20 |
| Conread position: | 7-232 |
| Cow position: | chr4:43515741-43515524 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 43, 36 |
| Conread position: | 7-234 |
| Cow position: | chr4:4320985-4321206 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 92, 18 |
| Conread position: | 7-234 |
| Cow position: | chr4:36893376-36893153 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 92, 13 |
| Conread position: | 7-234 |
| Cow position: | chr4:63096055-63096276 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 18, 56 |
| Conread position: | 7-241 |
| Cow position: | chr4:46550399-46550177 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 18, 54 |
| Conread position: | 7-241 |
| Cow position: | chr4:46591684-46591452 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 92, 17 |
| Conread position: | 7-241 |
| Cow position: | chr4:52748437-52748665 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 48, 13 |
| Conread position: | 10-234 |
| Cow position: | chr4:10915826-10916042 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 61, 49 |
| Conread position: | 12-260 |
| Cow position: | chr4:19744901-19744656 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 11, 6 |
| Conread position: | 14-169 |
| Cow position: | chr4:47047908-47047747 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 6, 57 |
| Conread position: | 14-230 |
| Cow position: | chr4:24744393-24744611 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 6, 150 |
| Conread position: | 14-232 |
| Cow position: | chr4:45644302-45644510 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 5, 46 |
| Conread position: | 17-241 |
| Cow position: | chr4:56435813-56435598 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 8, 63 |
| Conread position: | 18-233 |
| Cow position: | chr4:19438473-19438259 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 7, 154 |
| Conread position: | 18-233 |
| Cow position: | chr4:36290632-36290408 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 7, 51 |
| Conread position: | 18-234 |
| Cow position: | chr4:14153103-14152874 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 7, 197 |
| Conread position: | 18-234 |
| Cow position: | chr4:37470560-37470350 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 7, 16 |
| Conread position: | 18-241 |
| Cow position: | chr4:7430326-7430111 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 9, 43 |
| Conread position: | 18-241 |
| Cow position: | chr4:40414620-40414838 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 6, 59 |
| Conread position: | 18-241 |
| Cow position: | chr4:53209245-53209028 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 7, 53 |
| Conread position: | 18-241 |
| Cow position: | chr4:66172788-66173005 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 7, 75 |
| Conread position: | 18-242 |
| Cow position: | chr4:30974344-30974128 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 19-234 |
| Cow position: | chr4:39231514-39231723 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 5, 92 |
| Conread position: | 19-241 |
| Cow position: | chr4:23509603-23509381 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 7, 159 |
| Conread position: | 19-241 |
| Cow position: | chr4:35940000-35940219 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 5, 36 |
| Conread position: | 19-241 |
| Cow position: | chr4:45583112-45583335 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 5, 139 |
| Conread position: | 19-242 |
| Cow position: | chr4:21391805-21392021 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 84, 146 |
| Conread position: | 22-231 |
| Cow position: | chr4:275466-275262 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 73, 46 |
| Conread position: | 22-237 |
| Cow position: | chr4:480005-480210 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 75, 32 |
| Conread position: | 22-237 |
| Cow position: | chr4:14470566-14470774 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 56, 40 |
| Conread position: | 22-241 |
| Cow position: | chr4:561404-561193 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 55, 38 |
| Conread position: | 22-241 |
| Cow position: | chr4:4085115-4085343 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 36 |
| Conread position: | 22-241 |
| Cow position: | chr4:14964781-14964570 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 45, 122 |
| Conread position: | 22-241 |
| Cow position: | chr4:16799183-16799400 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 71, 144 |
| Conread position: | 22-241 |
| Cow position: | chr4:18576767-18576983 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 49, 140 |
| Conread position: | 22-241 |
| Cow position: | chr4:22215650-22215863 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 56, 46 |
| Conread position: | 22-241 |
| Cow position: | chr4:31023455-31023234 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 40, 128 |
| Conread position: | 22-241 |
| Cow position: | chr4:33612356-33612570 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 79, 22 |
| Conread position: | 22-241 |
| Cow position: | chr4:35981999-35981782 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 57, 151 |
| Conread position: | 22-241 |
| Cow position: | chr4:41867446-41867237 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 40, 135 |
| Conread position: | 22-252 |
| Cow position: | chr4:33357939-33357712 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 74, 147 |
| Conread position: | 22-254 |
| Cow position: | chr4:1026231-1026449 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 23-220 |
| Cow position: | chr4:32259843-32260041 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 80, 53 |
| Conread position: | 23-230 |
| Cow position: | chr4:5999188-5999389 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 56, 37 |
| Conread position: | 23-231 |
| Cow position: | chr4:43148413-43148206 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 37, 153 |
| Conread position: | 23-240 |
| Cow position: | chr4:46383368-46383580 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 78, 38 |
| Conread position: | 23-241 |
| Cow position: | chr4:48137914-48137702 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 68, 53 |
| Conread position: | 24-241 |
| Cow position: | chr4:36841284-36841072 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 72, 40 |
| Conread position: | 26-216 |
| Cow position: | chr4:53208292-53208109 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 40, 55 |
| Conread position: | 26-240 |
| Cow position: | chr4:59277480-59277686 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 26-241 |
| Cow position: | chr4:7571411-7571202 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 45, 128 |
| Conread position: | 26-241 |
| Cow position: | chr4:33970903-33971103 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 26-241 |
| Cow position: | chr4:41907802-41907999 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 27-218 |
| Cow position: | chr4:48961487-48961668 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 27-241 |
| Cow position: | chr4:9815349-9815559 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 76, 43 |
| Conread position: | 28-232 |
| Cow position: | chr4:2141747-2141547 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 39, 149 |
| Conread position: | 28-252 |
| Cow position: | chr4:66112074-66112296 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 44, 31 |
| Conread position: | 30-241 |
| Cow position: | chr4:27540611-27540414 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 31-241 |
| Cow position: | chr4:20327715-20327922 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 47, 28 |
| Conread position: | 36-232 |
| Cow position: | chr4:18095679-18095877 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 66, 111 |
| Conread position: | 36-232 |
| Cow position: | chr4:30791959-30791766 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 62, 18 |
| Conread position: | 36-241 |
| Cow position: | chr4:63964999-63965197 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 48 |
| Conread position: | 39-184 |
| Cow position: | chr4:34224101-34223960 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 33, 19 |
| Conread position: | 42-241 |
| Cow position: | chr4:11025374-11025570 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 25 |
| Conread position: | 53-234 |
| Cow position: | chr4:51083391-51083562 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 85, 15 |
| Conread position: | 55-241 |
| Cow position: | chr4:22744292-22744114 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 24, 50 |
| Conread position: | 58-241 |
| Cow position: | chr4:23600146-23599963 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 44, 116 |
| Conread position: | 62-241 |
| Cow position: | chr4:24810474-24810650 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 5, 105 |
| Conread position: | 62-242 |
| Cow position: | chr4:23655956-23655787 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 19, 8 |
| Conread position: | 64-237 |
| Cow position: | chr4:27291993-27292162 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 37, 101 |
| Conread position: | 64-241 |
| Cow position: | chr4:56513982-56514146 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 66-241 |
| Cow position: | chr4:11871950-11872119 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 37, 23 |
| Conread position: | 68-242 |
| Cow position: | chr4:46058793-46058959 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 92 |
| Conread position: | 75-234 |
| Cow position: | chr4:44072814-44072970 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 30, 90 |
| Conread position: | 95-237 |
| Cow position: | chr4:20842851-20842717 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 95-241 |
| Cow position: | chr4:22010137-22010266 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 97-230 |
| Cow position: | chr4:620224-620350 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 98-232 |
| Cow position: | chr4:61391279-61391406 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 102-241 |
| Cow position: | chr4:19542058-19541919 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 70 |
| Conread position: | 103-233 |
| Cow position: | chr4:63459292-63459415 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 103-234 |
| Cow position: | chr4:5610151-5610275 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 107-240 |
| Cow position: | chr4:56410104-56409975 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 40, 52 |
| Conread position: | 107-241 |
| Cow position: | chr4:49212798-49212928 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 122-240 |
| Cow position: | chr4:22072769-22072879 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
Show alignments to all cow chromosomes.