Cow genome map

Conread name: Ss1.1-rcbr0_006154.5

Conread position: 1-197
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 72

Conread position: 1-203
Cow position:
Alignm length: 205
Alignm identity: 150
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 26, 49

Conread position: 1-209
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 20, 14

Conread position: 1-223
Cow position:
Alignm length: 228
Alignm identity: 167
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 26, 34

Conread position: 1-227
Cow position:
Alignm length: 230
Alignm identity: 166
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 14

Conread position: 1-231
Cow position:
Alignm length: 232
Alignm identity: 165
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 22, 62

Conread position: 1-233
Cow position:
Alignm length: 234
Alignm identity: 170
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 14, 58

Conread position: 1-233
Cow position:
Alignm length: 235
Alignm identity: 173
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 24, 98

Conread position: 1-233
Cow position:
Alignm length: 235
Alignm identity: 168
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 103, 26

Conread position: 1-233
Cow position:
Alignm length: 235
Alignm identity: 173
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 24, 58

Conread position: 1-234
Cow position:
Alignm length: 239
Alignm identity: 176
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 24, 58

Conread position: 1-234
Cow position:
Alignm length: 240
Alignm identity: 164
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 14

Conread position: 1-234
Cow position:
Alignm length: 239
Alignm identity: 168
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 66, 23

Conread position: 1-234
Cow position:
Alignm length: 243
Alignm identity: 181
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 19, 14

Conread position: 1-234
Cow position:
Alignm length: 240
Alignm identity: 171
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 19, 14

Conread position: 1-236
Cow position:
Alignm length: 241
Alignm identity: 183
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 22, 172

Conread position: 1-237
Cow position:
Alignm length: 247
Alignm identity: 177
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 19, 14

Conread position: 1-237
Cow position:
Alignm length: 243
Alignm identity: 176
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 26, 177

Conread position: 1-237
Cow position:
Alignm length: 238
Alignm identity: 168
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 19, 14

Conread position: 1-240
Cow position:
Alignm length: 247
Alignm identity: 174
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 14

Conread position: 1-240
Cow position:
Alignm length: 245
Alignm identity: 177
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 22, 58

Conread position: 1-241
Cow position:
Alignm length: 246
Alignm identity: 184
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 22, 76

Conread position: 1-241
Cow position:
Alignm length: 247
Alignm identity: 178
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 14, 18

Conread position: 1-241
Cow position:
Alignm length: 246
Alignm identity: 170
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position:
Alignm length: 249
Alignm identity: 177
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 62

Conread position: 1-241
Cow position:
Alignm length: 247
Alignm identity: 173
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 28, 166

Conread position: 1-241
Cow position:
Alignm length: 253
Alignm identity: 175
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 183

Conread position: 1-241
Cow position:
Alignm length: 249
Alignm identity: 180
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 25, 176

Conread position: 1-241
Cow position:
Alignm length: 246
Alignm identity: 170
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position:
Alignm length: 245
Alignm identity: 171
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 20, 14

Conread position: 1-241
Cow position:
Alignm length: 245
Alignm identity: 173
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position:
Alignm length: 252
Alignm identity: 179
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 26, 178

Conread position: 1-241
Cow position:
Alignm length: 244
Alignm identity: 176
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 21, 14

Conread position: 1-241
Cow position:
Alignm length: 248
Alignm identity: 175
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 14

Conread position: 1-241
Cow position:
Alignm length: 246
Alignm identity: 173
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 24, 47

Conread position: 1-241
Cow position:
Alignm length: 248
Alignm identity: 191
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position:
Alignm length: 248
Alignm identity: 183
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position:
Alignm length: 252
Alignm identity: 177
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 24, 59

Conread position: 1-241
Cow position:
Alignm length: 244
Alignm identity: 180
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 24, 48

Conread position: 1-241
Cow position:
Alignm length: 244
Alignm identity: 172
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 24, 173

Conread position: 1-241
Cow position:
Alignm length: 246
Alignm identity: 175
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 71

Conread position: 1-241
Cow position:
Alignm length: 243
Alignm identity: 183
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 24, 166

Conread position: 1-242
Cow position:
Alignm length: 249
Alignm identity: 184
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 19, 14

Conread position: 1-242
Cow position:
Alignm length: 247
Alignm identity: 178
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 66, 47

Conread position: 1-242
Cow position:
Alignm length: 246
Alignm identity: 191
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 19, 14

Conread position: 1-245
Cow position:
Alignm length: 248
Alignm identity: 170
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 22, 95

Conread position: 1-245
Cow position:
Alignm length: 256
Alignm identity: 194
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 13, 174

Conread position: 1-267
Cow position:
Alignm length: 274
Alignm identity: 180
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 43

Conread position: 1-280
Cow position:
Alignm length: 286
Alignm identity: 196
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 14, 115

Conread position: 2-225
Cow position:
Alignm length: 225
Alignm identity: 155
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 71, 48

Conread position: 2-233
Cow position:
Alignm length: 236
Alignm identity: 170
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 23, 159

Conread position: 2-241
Cow position:
Alignm length: 241
Alignm identity: 167
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 21, 56

Conread position: 2-242
Cow position:
Alignm length: 257
Alignm identity: 185
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 13, 175

Conread position: 3-241
Cow position:
Alignm length: 244
Alignm identity: 169
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 79

Conread position: 3-241
Cow position:
Alignm length: 242
Alignm identity: 171
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 20, 70

Conread position: 5-228
Cow position:
Alignm length: 230
Alignm identity: 163
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 55

Conread position: 5-241
Cow position:
Alignm length: 244
Alignm identity: 183
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 10, 15

Conread position: 5-241
Cow position:
Alignm length: 245
Alignm identity: 191
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 160

Conread position: 5-241
Cow position:
Alignm length: 242
Alignm identity: 179
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 20, 64

Conread position: 5-242
Cow position:
Alignm length: 244
Alignm identity: 181
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 20, 64

Conread position: 6-241
Cow position:
Alignm length: 240
Alignm identity: 166
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 19, 151

Conread position: 6-245
Cow position:
Alignm length: 246
Alignm identity: 188
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 9, 52

Conread position: 7-230
Cow position:
Alignm length: 226
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 88, 17

Conread position: 7-233
Cow position:
Alignm length: 231
Alignm identity: 172
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 18, 65

Conread position: 7-235
Cow position:
Alignm length: 232
Alignm identity: 169
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 92, 15

Conread position: 9-234
Cow position:
Alignm length: 227
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 107

Conread position: 9-241
Cow position:
Alignm length: 235
Alignm identity: 170
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 16, 49

Conread position: 11-241
Cow position:
Alignm length: 235
Alignm identity: 168
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 94, 53

Conread position: 14-241
Cow position:
Alignm length: 232
Alignm identity: 165
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 68, 11

Conread position: 14-241
Cow position:
Alignm length: 234
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 63

Conread position: 14-241
Cow position:
Alignm length: 234
Alignm identity: 172
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 7, 163

Conread position: 14-241
Cow position:
Alignm length: 230
Alignm identity: 164
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 48, 17

Conread position: 14-241
Cow position:
Alignm length: 233
Alignm identity: 166
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 55, 44

Conread position: 18-233
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 153

Conread position: 18-241
Cow position:
Alignm length: 229
Alignm identity: 172
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 7, 47

Conread position: 18-241
Cow position:
Alignm length: 230
Alignm identity: 166
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 7, 155

Conread position: 18-241
Cow position:
Alignm length: 225
Alignm identity: 163
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 7, 41

Conread position: 19-234
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 5, 52

Conread position: 19-241
Cow position:
Alignm length: 223
Alignm identity: 157
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 19-245
Cow position:
Alignm length: 228
Alignm identity: 160
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 5, 53

Conread position: 21-241
Cow position:
Alignm length: 226
Alignm identity: 169
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 43, 141

Conread position: 22-214
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 45, 151

Conread position: 22-224
Cow position:
Alignm length: 207
Alignm identity: 152
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 83, 26

Conread position: 22-227
Cow position:
Alignm length: 206
Alignm identity: 148
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 22-232
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 39, 94

Conread position: 22-234
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 22-237
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 47, 61

Conread position: 22-240
Cow position:
Alignm length: 219
Alignm identity: 157
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 22-241
Cow position:
Alignm length: 225
Alignm identity: 157
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 140

Conread position: 22-241
Cow position:
Alignm length: 220
Alignm identity: 159
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 22-241
Cow position:
Alignm length: 229
Alignm identity: 162
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 38, 56

Conread position: 22-241
Cow position:
Alignm length: 221
Alignm identity: 165
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 28, 86

Conread position: 22-241
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 114, 46

Conread position: 22-241
Cow position:
Alignm length: 227
Alignm identity: 165
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 77, 36

Conread position: 22-241
Cow position:
Alignm length: 227
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 48

Conread position: 22-241
Cow position:
Alignm length: 223
Alignm identity: 171
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 47, 54

Conread position: 22-242
Cow position:
Alignm length: 222
Alignm identity: 164
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 50, 78

Conread position: 22-244
Cow position:
Alignm length: 227
Alignm identity: 167
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 79, 36

Conread position: 22-249
Cow position:
Alignm length: 230
Alignm identity: 174
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 81, 38

Conread position: 22-259
Cow position:
Alignm length: 245
Alignm identity: 176
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 142

Conread position: 23-252
Cow position:
Alignm length: 235
Alignm identity: 164
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 126

Conread position: 24-233
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 34

Conread position: 25-241
Cow position:
Alignm length: 221
Alignm identity: 160
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 74, 38

Conread position: 25-263
Cow position:
Alignm length: 242
Alignm identity: 162
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 216, 51

Conread position: 26-226
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 124, 36

Conread position: 26-241
Cow position:
Alignm length: 216
Alignm identity: 152
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 26-241
Cow position:
Alignm length: 221
Alignm identity: 167
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 64, 146

Conread position: 27-241
Cow position:
Alignm length: 229
Alignm identity: 164
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 148

Conread position: 36-237
Cow position:
Alignm length: 205
Alignm identity: 152
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 26, 34

Conread position: 36-241
Cow position:
Alignm length: 211
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 34, 87

Conread position: 37-232
Cow position:
Alignm length: 203
Alignm identity: 147
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 40, 141

Conread position: 42-233
Cow position:
Alignm length: 193
Alignm identity: 137
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 107, 32

Conread position: 42-241
Cow position:
Alignm length: 203
Alignm identity: 143
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 27, 132

Conread position: 49-241
Cow position:
Alignm length: 201
Alignm identity: 155
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 15, 130

Conread position: 60-241
Cow position:
Alignm length: 183
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 30

Conread position: 68-234
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 37, 96

Conread position: 95-241
Cow position:
Alignm length: 147
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 95-241
Cow position:
Alignm length: 147
Alignm identity: 116
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 97-241
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 128, 74

Conread position: 98-237
Cow position:
Alignm length: 140
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 103-242
Cow position:
Alignm length: 140
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 167-242
Cow position:
Alignm length: 76
Alignm identity: 72
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.