Cow genome map
| Conread name: | Ss1.1-rcbr0_006154.5 |
| Conread position: | 1-197 |
| Cow position: | chr5:57101721-57101910 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 1-203 |
| Cow position: | chr5:7755511-7755702 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 26, 49 |
| Conread position: | 1-209 |
| Cow position: | chr5:31144729-31144933 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 20, 14 |
| Conread position: | 1-223 |
| Cow position: | chr5:42050610-42050391 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 26, 34 |
| Conread position: | 1-227 |
| Cow position: | chr5:46425797-46426011 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 21, 14 |
| Conread position: | 1-231 |
| Cow position: | chr5:30276748-30276529 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 22, 62 |
| Conread position: | 1-233 |
| Cow position: | chr5:6286375-6286593 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 14, 58 |
| Conread position: | 1-233 |
| Cow position: | chr5:15598177-15598400 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 24, 98 |
| Conread position: | 1-233 |
| Cow position: | chr5:38833179-38832953 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 103, 26 |
| Conread position: | 1-233 |
| Cow position: | chr5:69337878-69337661 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 24, 58 |
| Conread position: | 1-234 |
| Cow position: | chr5:30253799-30253574 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 24, 58 |
| Conread position: | 1-234 |
| Cow position: | chr5:34050176-34049942 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 14 |
| Conread position: | 1-234 |
| Cow position: | chr5:40039712-40039938 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 66, 23 |
| Conread position: | 1-234 |
| Cow position: | chr5:53835775-53835547 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-234 |
| Cow position: | chr5:56820203-56820429 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-236 |
| Cow position: | chr5:21828926-21828695 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 183 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 22, 172 |
| Conread position: | 1-237 |
| Cow position: | chr5:9894065-9894296 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-237 |
| Cow position: | chr5:26467684-26467449 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 26, 177 |
| Conread position: | 1-237 |
| Cow position: | chr5:56317351-56317124 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-240 |
| Cow position: | chr5:16893713-16893949 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-240 |
| Cow position: | chr5:24996164-24996399 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 22, 58 |
| Conread position: | 1-241 |
| Cow position: | chr5:5111016-5111251 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 22, 76 |
| Conread position: | 1-241 |
| Cow position: | chr5:7044647-7044885 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 14, 18 |
| Conread position: | 1-241 |
| Cow position: | chr5:8820954-8821186 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-241 |
| Cow position: | chr5:11229612-11229848 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 10, 62 |
| Conread position: | 1-241 |
| Cow position: | chr5:14629752-14629989 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 28, 166 |
| Conread position: | 1-241 |
| Cow position: | chr5:15426596-15426351 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 183 |
| Conread position: | 1-241 |
| Cow position: | chr5:17086962-17087203 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 25, 176 |
| Conread position: | 1-241 |
| Cow position: | chr5:30845171-30844936 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-241 |
| Cow position: | chr5:35684996-35684760 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 20, 14 |
| Conread position: | 1-241 |
| Cow position: | chr5:44028245-44028476 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-241 |
| Cow position: | chr5:45472340-45472091 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 26, 178 |
| Conread position: | 1-241 |
| Cow position: | chr5:45804118-45803886 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 21, 14 |
| Conread position: | 1-241 |
| Cow position: | chr5:46509807-46510041 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 20, 14 |
| Conread position: | 1-241 |
| Cow position: | chr5:47601870-47601642 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 24, 47 |
| Conread position: | 1-241 |
| Cow position: | chr5:56070917-56070678 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 191 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-241 |
| Cow position: | chr5:57935050-57935288 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-241 |
| Cow position: | chr5:58793549-58793789 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 24, 59 |
| Conread position: | 1-241 |
| Cow position: | chr5:62172470-62172244 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 24, 48 |
| Conread position: | 1-241 |
| Cow position: | chr5:64823253-64823487 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 24, 173 |
| Conread position: | 1-241 |
| Cow position: | chr5:66257697-66257467 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 71 |
| Conread position: | 1-241 |
| Cow position: | chr5:69461391-69461160 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 24, 166 |
| Conread position: | 1-242 |
| Cow position: | chr5:21617516-21617280 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-242 |
| Cow position: | chr5:30302952-30302720 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 66, 47 |
| Conread position: | 1-242 |
| Cow position: | chr5:50600105-50599878 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-245 |
| Cow position: | chr5:12322746-12322980 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 22, 95 |
| Conread position: | 1-245 |
| Cow position: | chr5:22242712-22242965 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 194 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 13, 174 |
| Conread position: | 1-267 |
| Cow position: | chr5:32338907-32339178 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 9, 43 |
| Conread position: | 1-280 |
| Cow position: | chr5:6670135-6670408 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 14, 115 |
| Conread position: | 2-225 |
| Cow position: | chr5:25230952-25231166 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 71, 48 |
| Conread position: | 2-233 |
| Cow position: | chr5:45845634-45845862 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 23, 159 |
| Conread position: | 2-241 |
| Cow position: | chr5:64139617-64139388 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 21, 56 |
| Conread position: | 2-242 |
| Cow position: | chr5:44446808-44447062 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 13, 175 |
| Conread position: | 3-241 |
| Cow position: | chr5:52000279-52000044 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 12, 79 |
| Conread position: | 3-241 |
| Cow position: | chr5:67243977-67243751 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 20, 70 |
| Conread position: | 5-228 |
| Cow position: | chr5:41545839-41546052 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 20, 55 |
| Conread position: | 5-241 |
| Cow position: | chr5:14314582-14314347 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 10, 15 |
| Conread position: | 5-241 |
| Cow position: | chr5:34562071-34561834 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 15, 160 |
| Conread position: | 5-241 |
| Cow position: | chr5:34638938-34638711 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 20, 64 |
| Conread position: | 5-242 |
| Cow position: | chr5:3627098-3627331 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 20, 64 |
| Conread position: | 6-241 |
| Cow position: | chr5:12709942-12709711 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 19, 151 |
| Conread position: | 6-245 |
| Cow position: | chr5:46512715-46512946 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 9, 52 |
| Conread position: | 7-230 |
| Cow position: | chr5:26262624-26262839 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 88, 17 |
| Conread position: | 7-233 |
| Cow position: | chr5:30629107-30629324 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 18, 65 |
| Conread position: | 7-235 |
| Cow position: | chr5:30949865-30950088 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 92, 15 |
| Conread position: | 9-234 |
| Cow position: | chr5:56014781-56014567 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 16, 107 |
| Conread position: | 9-241 |
| Cow position: | chr5:34916181-34915967 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 16, 49 |
| Conread position: | 11-241 |
| Cow position: | chr5:6086513-6086736 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 94, 53 |
| Conread position: | 14-241 |
| Cow position: | chr5:26377625-26377841 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 68, 11 |
| Conread position: | 14-241 |
| Cow position: | chr5:44587239-44587468 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 19, 63 |
| Conread position: | 14-241 |
| Cow position: | chr5:57575817-57575591 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 7, 163 |
| Conread position: | 14-241 |
| Cow position: | chr5:59443206-59443426 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 48, 17 |
| Conread position: | 14-241 |
| Cow position: | chr5:62826708-62826928 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 55, 44 |
| Conread position: | 18-233 |
| Cow position: | chr5:74015983-74015773 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 153 |
| Conread position: | 18-241 |
| Cow position: | chr5:55966839-55967057 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 7, 47 |
| Conread position: | 18-241 |
| Cow position: | chr5:57074290-57074509 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 7, 155 |
| Conread position: | 18-241 |
| Cow position: | chr5:64176085-64176295 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 7, 41 |
| Conread position: | 19-234 |
| Cow position: | chr5:52165137-52165350 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 5, 52 |
| Conread position: | 19-241 |
| Cow position: | chr5:19470151-19470361 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 19-245 |
| Cow position: | chr5:9089983-9090201 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 5, 53 |
| Conread position: | 21-241 |
| Cow position: | chr5:6045331-6045113 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 43, 141 |
| Conread position: | 22-214 |
| Cow position: | chr5:63865834-63865644 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 45, 151 |
| Conread position: | 22-224 |
| Cow position: | chr5:50821819-50821621 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 83, 26 |
| Conread position: | 22-227 |
| Cow position: | chr5:45397609-45397418 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 22-232 |
| Cow position: | chr5:56524210-56524006 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 39, 94 |
| Conread position: | 22-234 |
| Cow position: | chr5:16025424-16025628 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 22-237 |
| Cow position: | chr5:69520927-69520720 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 47, 61 |
| Conread position: | 22-240 |
| Cow position: | chr5:15363918-15363717 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 22-241 |
| Cow position: | chr5:28927550-28927767 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 140 |
| Conread position: | 22-241 |
| Cow position: | chr5:35969569-35969368 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 22-241 |
| Cow position: | chr5:37646507-37646725 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 38, 56 |
| Conread position: | 22-241 |
| Cow position: | chr5:57626833-57626632 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 28, 86 |
| Conread position: | 22-241 |
| Cow position: | chr5:61726003-61725795 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 114, 46 |
| Conread position: | 22-241 |
| Cow position: | chr5:64321790-64321574 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 77, 36 |
| Conread position: | 22-241 |
| Cow position: | chr5:65752896-65752682 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 48 |
| Conread position: | 22-241 |
| Cow position: | chr5:65941214-65941428 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 47, 54 |
| Conread position: | 22-242 |
| Cow position: | chr5:65967695-65967906 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 50, 78 |
| Conread position: | 22-244 |
| Cow position: | chr5:29903487-29903700 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 79, 36 |
| Conread position: | 22-249 |
| Cow position: | chr5:27015716-27015499 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 81, 38 |
| Conread position: | 22-259 |
| Cow position: | chr5:3549745-3549969 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 142 |
| Conread position: | 23-252 |
| Cow position: | chr5:8994530-8994752 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 126 |
| Conread position: | 24-233 |
| Cow position: | chr5:43474879-43474681 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 66, 34 |
| Conread position: | 25-241 |
| Cow position: | chr5:51357468-51357678 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 74, 38 |
| Conread position: | 25-263 |
| Cow position: | chr5:20345195-20344957 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 216, 51 |
| Conread position: | 26-226 |
| Cow position: | chr5:49821172-49820980 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 124, 36 |
| Conread position: | 26-241 |
| Cow position: | chr5:20783652-20783450 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 26-241 |
| Cow position: | chr5:35826634-35826416 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 64, 146 |
| Conread position: | 27-241 |
| Cow position: | chr5:49559212-49558993 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 33, 148 |
| Conread position: | 36-237 |
| Cow position: | chr5:41009971-41010167 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 26, 34 |
| Conread position: | 36-241 |
| Cow position: | chr5:9859689-9859893 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 34, 87 |
| Conread position: | 37-232 |
| Cow position: | chr5:16509121-16508925 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 40, 141 |
| Conread position: | 42-233 |
| Cow position: | chr5:37941777-37941959 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 107, 32 |
| Conread position: | 42-241 |
| Cow position: | chr5:4221001-4220806 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 27, 132 |
| Conread position: | 49-241 |
| Cow position: | chr5:50943135-50943328 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 15, 130 |
| Conread position: | 60-241 |
| Cow position: | chr5:69099526-69099354 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 21, 30 |
| Conread position: | 68-234 |
| Cow position: | chr5:56028536-56028698 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 37, 96 |
| Conread position: | 95-241 |
| Cow position: | chr5:50870507-50870367 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 95-241 |
| Cow position: | chr5:57576177-57576039 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 97-241 |
| Cow position: | chr5:28324313-28324171 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 128, 74 |
| Conread position: | 98-237 |
| Cow position: | chr5:20407709-20407837 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 103-242 |
| Cow position: | chr5:47871090-47871226 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 167-242 |
| Cow position: | chr5:60015819-60015744 (view UCSC Genome Browser custom track) |
| Alignm length: | 76 |
| Alignm identity: | 72 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.