Cow genome map

Conread name: Ss1.1-rcbr0_006154.5

Conread position: 1-169
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 19, 14

Conread position: 1-169
Cow position:
Alignm length: 176
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-227
Cow position:
Alignm length: 232
Alignm identity: 167
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 24, 70

Conread position: 1-230
Cow position:
Alignm length: 236
Alignm identity: 169
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 53

Conread position: 1-232
Cow position:
Alignm length: 237
Alignm identity: 171
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 24, 130

Conread position: 1-233
Cow position:
Alignm length: 239
Alignm identity: 174
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 37, 24

Conread position: 1-233
Cow position:
Alignm length: 234
Alignm identity: 163
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 25, 68

Conread position: 1-233
Cow position:
Alignm length: 239
Alignm identity: 163
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 24, 176

Conread position: 1-233
Cow position:
Alignm length: 238
Alignm identity: 169
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 24, 43

Conread position: 1-234
Cow position:
Alignm length: 237
Alignm identity: 170
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 24, 69

Conread position: 1-234
Cow position:
Alignm length: 238
Alignm identity: 166
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 64

Conread position: 1-234
Cow position:
Alignm length: 235
Alignm identity: 168
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 42

Conread position: 1-236
Cow position:
Alignm length: 243
Alignm identity: 178
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 20, 14

Conread position: 1-236
Cow position:
Alignm length: 242
Alignm identity: 169
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 26, 14

Conread position: 1-237
Cow position:
Alignm length: 240
Alignm identity: 166
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 23, 99

Conread position: 1-237
Cow position:
Alignm length: 241
Alignm identity: 174
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 104, 74

Conread position: 1-240
Cow position:
Alignm length: 245
Alignm identity: 170
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 53

Conread position: 1-240
Cow position:
Alignm length: 242
Alignm identity: 174
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 14

Conread position: 1-240
Cow position:
Alignm length: 245
Alignm identity: 178
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 26, 14

Conread position: 1-241
Cow position:
Alignm length: 249
Alignm identity: 188
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 19, 8

Conread position: 1-241
Cow position:
Alignm length: 247
Alignm identity: 180
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 22, 172

Conread position: 1-241
Cow position:
Alignm length: 242
Alignm identity: 166
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 22, 39

Conread position: 1-241
Cow position:
Alignm length: 242
Alignm identity: 171
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 68, 24

Conread position: 1-241
Cow position:
Alignm length: 242
Alignm identity: 170
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 24, 105

Conread position: 1-241
Cow position:
Alignm length: 250
Alignm identity: 173
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 28, 14

Conread position: 1-241
Cow position:
Alignm length: 247
Alignm identity: 173
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 14

Conread position: 1-241
Cow position:
Alignm length: 252
Alignm identity: 189
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 19, 9

Conread position: 1-241
Cow position:
Alignm length: 245
Alignm identity: 179
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 14

Conread position: 1-241
Cow position:
Alignm length: 247
Alignm identity: 184
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 20, 14

Conread position: 1-241
Cow position:
Alignm length: 243
Alignm identity: 172
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position:
Alignm length: 247
Alignm identity: 179
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position:
Alignm length: 247
Alignm identity: 179
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 24, 173

Conread position: 1-241
Cow position:
Alignm length: 246
Alignm identity: 177
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 24, 58

Conread position: 1-241
Cow position:
Alignm length: 243
Alignm identity: 175
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 24, 76

Conread position: 1-241
Cow position:
Alignm length: 247
Alignm identity: 171
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 14, 21

Conread position: 1-241
Cow position:
Alignm length: 245
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 168

Conread position: 1-241
Cow position:
Alignm length: 243
Alignm identity: 173
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position:
Alignm length: 243
Alignm identity: 177
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 24, 76

Conread position: 1-241
Cow position:
Alignm length: 247
Alignm identity: 189
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 14, 19

Conread position: 1-241
Cow position:
Alignm length: 243
Alignm identity: 182
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 24, 90

Conread position: 1-241
Cow position:
Alignm length: 244
Alignm identity: 168
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 17

Conread position: 1-241
Cow position:
Alignm length: 247
Alignm identity: 170
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 32

Conread position: 1-241
Cow position:
Alignm length: 242
Alignm identity: 169
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 42

Conread position: 1-241
Cow position:
Alignm length: 246
Alignm identity: 176
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 26, 117

Conread position: 1-242
Cow position:
Alignm length: 251
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 61

Conread position: 1-245
Cow position:
Alignm length: 252
Alignm identity: 193
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 19, 14

Conread position: 1-245
Cow position:
Alignm length: 252
Alignm identity: 179
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 23, 76

Conread position: 1-250
Cow position:
Alignm length: 256
Alignm identity: 187
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 19, 14

Conread position: 1-260
Cow position:
Alignm length: 270
Alignm identity: 193
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 24, 73

Conread position: 2-241
Cow position:
Alignm length: 242
Alignm identity: 180
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 20, 13

Conread position: 2-241
Cow position:
Alignm length: 246
Alignm identity: 178
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 23, 67

Conread position: 2-241
Cow position:
Alignm length: 245
Alignm identity: 181
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 23, 61

Conread position: 2-241
Cow position:
Alignm length: 246
Alignm identity: 180
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 19, 68

Conread position: 3-205
Cow position:
Alignm length: 205
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 111

Conread position: 3-241
Cow position:
Alignm length: 246
Alignm identity: 173
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 18, 12

Conread position: 4-235
Cow position:
Alignm length: 243
Alignm identity: 172
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 123

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 166
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 16, 74

Conread position: 5-212
Cow position:
Alignm length: 215
Alignm identity: 154
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 18, 67

Conread position: 5-241
Cow position:
Alignm length: 242
Alignm identity: 179
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 20, 10

Conread position: 5-241
Cow position:
Alignm length: 242
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 19

Conread position: 5-242
Cow position:
Alignm length: 242
Alignm identity: 184
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 18, 170

Conread position: 6-241
Cow position:
Alignm length: 255
Alignm identity: 176
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 19, 48

Conread position: 7-233
Cow position:
Alignm length: 231
Alignm identity: 158
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 95, 17

Conread position: 7-241
Cow position:
Alignm length: 241
Alignm identity: 173
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 18, 160

Conread position: 8-233
Cow position:
Alignm length: 232
Alignm identity: 159
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 12, 155

Conread position: 9-261
Cow position:
Alignm length: 256
Alignm identity: 172
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 87, 73

Conread position: 10-232
Cow position:
Alignm length: 229
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 7

Conread position: 14-230
Cow position:
Alignm length: 221
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 85, 144

Conread position: 15-250
Cow position:
Alignm length: 244
Alignm identity: 172
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 9, 44

Conread position: 16-225
Cow position:
Alignm length: 215
Alignm identity: 147
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 9

Conread position: 17-234
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 88, 51

Conread position: 17-241
Cow position:
Alignm length: 230
Alignm identity: 168
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 8, 44

Conread position: 18-233
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 7, 142

Conread position: 18-237
Cow position:
Alignm length: 225
Alignm identity: 160
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 8, 158

Conread position: 18-241
Cow position:
Alignm length: 230
Alignm identity: 160
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 9, 27

Conread position: 18-241
Cow position:
Alignm length: 234
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 6, 47

Conread position: 18-241
Cow position:
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 6, 47

Conread position: 18-241
Cow position:
Alignm length: 230
Alignm identity: 165
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 5, 52

Conread position: 18-241
Cow position:
Alignm length: 231
Alignm identity: 164
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 8, 145

Conread position: 18-241
Cow position:
Alignm length: 229
Alignm identity: 165
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 5, 43

Conread position: 18-245
Cow position:
Alignm length: 232
Alignm identity: 167
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 51

Conread position: 18-252
Cow position:
Alignm length: 249
Alignm identity: 170
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 6, 59

Conread position: 18-252
Cow position:
Alignm length: 237
Alignm identity: 174
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 7, 152

Conread position: 19-232
Cow position:
Alignm length: 218
Alignm identity: 160
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 5, 151

Conread position: 19-234
Cow position:
Alignm length: 221
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 5, 65

Conread position: 19-234
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 18, 40

Conread position: 20-241
Cow position:
Alignm length: 227
Alignm identity: 154
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 79, 50

Conread position: 22-169
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 80, 27

Conread position: 22-182
Cow position:
Alignm length: 161
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 22-217
Cow position:
Alignm length: 200
Alignm identity: 144
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 74, 35

Conread position: 22-232
Cow position:
Alignm length: 214
Alignm identity: 149
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 67, 138

Conread position: 22-233
Cow position:
Alignm length: 212
Alignm identity: 160
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 22-233
Cow position:
Alignm length: 213
Alignm identity: 163
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 42, 55

Conread position: 22-234
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 57, 151

Conread position: 22-234
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 43, 151

Conread position: 22-237
Cow position:
Alignm length: 216
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 22-241
Cow position:
Alignm length: 222
Alignm identity: 150
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 35, 137

Conread position: 22-241
Cow position:
Alignm length: 220
Alignm identity: 168
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 36, 0

Conread position: 22-241
Cow position:
Alignm length: 223
Alignm identity: 164
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 32, 53

Conread position: 22-241
Cow position:
Alignm length: 224
Alignm identity: 160
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 42, 143

Conread position: 22-241
Cow position:
Alignm length: 221
Alignm identity: 153
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 46, 96

Conread position: 22-241
Cow position:
Alignm length: 220
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 22-241
Cow position:
Alignm length: 226
Alignm identity: 164
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 54, 143

Conread position: 22-241
Cow position:
Alignm length: 228
Alignm identity: 161
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 48, 25

Conread position: 22-242
Cow position:
Alignm length: 225
Alignm identity: 157
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 77, 146

Conread position: 22-242
Cow position:
Alignm length: 224
Alignm identity: 162
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 83, 54

Conread position: 22-263
Cow position:
Alignm length: 248
Alignm identity: 172
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 41, 49

Conread position: 23-225
Cow position:
Alignm length: 208
Alignm identity: 143
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 49, 133

Conread position: 23-234
Cow position:
Alignm length: 216
Alignm identity: 148
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 132

Conread position: 23-234
Cow position:
Alignm length: 216
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 37

Conread position: 23-241
Cow position:
Alignm length: 228
Alignm identity: 166
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 24, 144

Conread position: 23-241
Cow position:
Alignm length: 223
Alignm identity: 155
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 70

Conread position: 24-267
Cow position:
Alignm length: 246
Alignm identity: 175
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 80, 19

Conread position: 26-212
Cow position:
Alignm length: 188
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 62

Conread position: 26-226
Cow position:
Alignm length: 205
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 135

Conread position: 26-234
Cow position:
Alignm length: 214
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 76, 144

Conread position: 26-240
Cow position:
Alignm length: 215
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 26-241
Cow position:
Alignm length: 221
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 149

Conread position: 26-241
Cow position:
Alignm length: 220
Alignm identity: 153
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 71, 22

Conread position: 34-240
Cow position:
Alignm length: 211
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 65, 15

Conread position: 35-237
Cow position:
Alignm length: 207
Alignm identity: 158
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 70, 19

Conread position: 36-241
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 23

Conread position: 38-242
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 60, 20

Conread position: 41-241
Cow position:
Alignm length: 207
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 126

Conread position: 43-231
Cow position:
Alignm length: 194
Alignm identity: 140
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 7, 35

Conread position: 43-241
Cow position:
Alignm length: 203
Alignm identity: 154
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 64, 129

Conread position: 45-234
Cow position:
Alignm length: 191
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 15

Conread position: 49-241
Cow position:
Alignm length: 198
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 14

Conread position: 53-239
Cow position:
Alignm length: 189
Alignm identity: 146
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 50, 25

Conread position: 58-241
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 112, 0

Conread position: 60-241
Cow position:
Alignm length: 186
Alignm identity: 140
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 9, 115

Conread position: 60-241
Cow position:
Alignm length: 184
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 113

Conread position: 63-241
Cow position:
Alignm length: 179
Alignm identity: 130
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 68-245
Cow position:
Alignm length: 183
Alignm identity: 135
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 10

Conread position: 75-231
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 99

Conread position: 83-241
Cow position:
Alignm length: 163
Alignm identity: 127
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 13, 92

Conread position: 95-241
Cow position:
Alignm length: 147
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 72, 0

Conread position: 97-235
Cow position:
Alignm length: 141
Alignm identity: 114
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 74, 79

Conread position: 103-241
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 105-244
Cow position:
Alignm length: 140
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 56, 0

Show alignments to all cow chromosomes.