Cow genome map

Conread name: Ss1.1-rcbr0_006154.5

Conread position: 1-169
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 19, 14

Conread position: 1-169
Cow position:
Alignm length: 173
Alignm identity: 132
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 19, 14

Conread position: 1-169
Cow position:
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 1-194
Cow position:
Alignm length: 201
Alignm identity: 149
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 14, 19

Conread position: 1-203
Cow position:
Alignm length: 204
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 48

Conread position: 1-208
Cow position:
Alignm length: 218
Alignm identity: 157
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 75, 14

Conread position: 1-213
Cow position:
Alignm length: 214
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 68

Conread position: 1-218
Cow position:
Alignm length: 223
Alignm identity: 161
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 103, 14

Conread position: 1-225
Cow position:
Alignm length: 226
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 22

Conread position: 1-229
Cow position:
Alignm length: 236
Alignm identity: 170
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 19, 8

Conread position: 1-232
Cow position:
Alignm length: 239
Alignm identity: 169
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 14

Conread position: 1-232
Cow position:
Alignm length: 240
Alignm identity: 167
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 14

Conread position: 1-232
Cow position:
Alignm length: 238
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 14

Conread position: 1-232
Cow position:
Alignm length: 238
Alignm identity: 181
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 20, 8

Conread position: 1-234
Cow position:
Alignm length: 244
Alignm identity: 164
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 14

Conread position: 1-234
Cow position:
Alignm length: 240
Alignm identity: 172
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 26, 81

Conread position: 1-234
Cow position:
Alignm length: 240
Alignm identity: 167
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 19

Conread position: 1-234
Cow position:
Alignm length: 236
Alignm identity: 172
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 19, 14

Conread position: 1-234
Cow position:
Alignm length: 241
Alignm identity: 175
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 18, 14

Conread position: 1-234
Cow position:
Alignm length: 239
Alignm identity: 182
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 19, 14

Conread position: 1-236
Cow position:
Alignm length: 239
Alignm identity: 180
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 25, 54

Conread position: 1-237
Cow position:
Alignm length: 243
Alignm identity: 183
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 20, 14

Conread position: 1-237
Cow position:
Alignm length: 238
Alignm identity: 173
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 22, 62

Conread position: 1-237
Cow position:
Alignm length: 238
Alignm identity: 172
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 24, 101

Conread position: 1-239
Cow position:
Alignm length: 244
Alignm identity: 176
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 26, 58

Conread position: 1-239
Cow position:
Alignm length: 241
Alignm identity: 173
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 24, 55

Conread position: 1-240
Cow position:
Alignm length: 245
Alignm identity: 179
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 22, 42

Conread position: 1-240
Cow position:
Alignm length: 245
Alignm identity: 170
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position:
Alignm length: 248
Alignm identity: 169
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 23, 119

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 162
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 1-241
Cow position:
Alignm length: 246
Alignm identity: 169
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 99

Conread position: 1-241
Cow position:
Alignm length: 247
Alignm identity: 186
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 24, 173

Conread position: 1-241
Cow position:
Alignm length: 251
Alignm identity: 175
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 27, 41

Conread position: 1-241
Cow position:
Alignm length: 247
Alignm identity: 176
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 24, 148

Conread position: 1-241
Cow position:
Alignm length: 245
Alignm identity: 173
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 26, 118

Conread position: 1-241
Cow position:
Alignm length: 244
Alignm identity: 174
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 24, 54

Conread position: 1-241
Cow position:
Alignm length: 250
Alignm identity: 191
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 14, 143

Conread position: 1-241
Cow position:
Alignm length: 253
Alignm identity: 191
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 24, 179

Conread position: 1-241
Cow position:
Alignm length: 243
Alignm identity: 183
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 24, 114

Conread position: 1-241
Cow position:
Alignm length: 249
Alignm identity: 170
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position:
Alignm length: 248
Alignm identity: 177
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 20, 14

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 164
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 1-241
Cow position:
Alignm length: 247
Alignm identity: 189
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 59, 76

Conread position: 1-241
Cow position:
Alignm length: 243
Alignm identity: 169
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 24, 63

Conread position: 1-242
Cow position:
Alignm length: 247
Alignm identity: 176
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 24, 163

Conread position: 1-242
Cow position:
Alignm length: 256
Alignm identity: 182
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 18, 14

Conread position: 1-242
Cow position:
Alignm length: 249
Alignm identity: 181
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 22, 128

Conread position: 1-242
Cow position:
Alignm length: 247
Alignm identity: 175
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 74

Conread position: 1-252
Cow position:
Alignm length: 260
Alignm identity: 181
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 62

Conread position: 1-312
Cow position:
Alignm length: 319
Alignm identity: 191
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 57

Conread position: 2-208
Cow position:
Alignm length: 213
Alignm identity: 152
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 53

Conread position: 2-214
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 25, 93

Conread position: 2-232
Cow position:
Alignm length: 237
Alignm identity: 165
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 8

Conread position: 2-237
Cow position:
Alignm length: 240
Alignm identity: 172
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 18, 13

Conread position: 2-242
Cow position:
Alignm length: 241
Alignm identity: 165
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 113, 0

Conread position: 3-234
Cow position:
Alignm length: 240
Alignm identity: 173
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 17, 12

Conread position: 4-241
Cow position:
Alignm length: 244
Alignm identity: 176
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 19, 165

Conread position: 4-242
Cow position:
Alignm length: 245
Alignm identity: 187
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 16, 11

Conread position: 5-209
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 10

Conread position: 5-234
Cow position:
Alignm length: 235
Alignm identity: 166
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 39

Conread position: 5-241
Cow position:
Alignm length: 243
Alignm identity: 166
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 14

Conread position: 5-241
Cow position:
Alignm length: 241
Alignm identity: 166
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 10

Conread position: 5-261
Cow position:
Alignm length: 262
Alignm identity: 191
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 65, 24

Conread position: 7-241
Cow position:
Alignm length: 236
Alignm identity: 163
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 75, 13

Conread position: 7-245
Cow position:
Alignm length: 241
Alignm identity: 175
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 13, 8

Conread position: 7-252
Cow position:
Alignm length: 249
Alignm identity: 171
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 10, 14

Conread position: 10-234
Cow position:
Alignm length: 225
Alignm identity: 161
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 12-242
Cow position:
Alignm length: 246
Alignm identity: 169
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 8, 13

Conread position: 14-233
Cow position:
Alignm length: 221
Alignm identity: 160
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 45

Conread position: 14-234
Cow position:
Alignm length: 228
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 6, 61

Conread position: 14-241
Cow position:
Alignm length: 232
Alignm identity: 169
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 85, 158

Conread position: 14-241
Cow position:
Alignm length: 231
Alignm identity: 159
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 6, 52

Conread position: 14-241
Cow position:
Alignm length: 232
Alignm identity: 176
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 6, 44

Conread position: 14-241
Cow position:
Alignm length: 230
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 7

Conread position: 14-241
Cow position:
Alignm length: 230
Alignm identity: 163
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 10, 149

Conread position: 14-242
Cow position:
Alignm length: 236
Alignm identity: 163
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 19, 58

Conread position: 14-267
Cow position:
Alignm length: 261
Alignm identity: 184
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 6, 50

Conread position: 15-241
Cow position:
Alignm length: 232
Alignm identity: 172
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 13, 7

Conread position: 16-242
Cow position:
Alignm length: 232
Alignm identity: 158
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 8, 61

Conread position: 18-168
Cow position:
Alignm length: 152
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 8, 53

Conread position: 18-241
Cow position:
Alignm length: 225
Alignm identity: 166
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 7, 45

Conread position: 18-241
Cow position:
Alignm length: 232
Alignm identity: 167
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 5, 108

Conread position: 18-244
Cow position:
Alignm length: 230
Alignm identity: 166
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 7, 51

Conread position: 18-245
Cow position:
Alignm length: 230
Alignm identity: 162
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 9, 150

Conread position: 19-212
Cow position:
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 5, 146

Conread position: 19-233
Cow position:
Alignm length: 224
Alignm identity: 152
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 19-241
Cow position:
Alignm length: 228
Alignm identity: 160
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 5, 157

Conread position: 22-207
Cow position:
Alignm length: 190
Alignm identity: 145
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 76, 16

Conread position: 22-230
Cow position:
Alignm length: 219
Alignm identity: 162
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 16, 155

Conread position: 22-234
Cow position:
Alignm length: 217
Alignm identity: 149
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 153

Conread position: 22-234
Cow position:
Alignm length: 220
Alignm identity: 160
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 77, 46

Conread position: 22-240
Cow position:
Alignm length: 222
Alignm identity: 148
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 151, 194

Conread position: 22-242
Cow position:
Alignm length: 226
Alignm identity: 163
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 77, 40

Conread position: 23-222
Cow position:
Alignm length: 202
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 73, 150

Conread position: 23-234
Cow position:
Alignm length: 215
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 38

Conread position: 23-240
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 33

Conread position: 23-241
Cow position:
Alignm length: 223
Alignm identity: 156
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 48

Conread position: 23-241
Cow position:
Alignm length: 225
Alignm identity: 160
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 41

Conread position: 23-241
Cow position:
Alignm length: 222
Alignm identity: 154
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 85, 35

Conread position: 23-241
Cow position:
Alignm length: 225
Alignm identity: 161
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 52, 33

Conread position: 23-241
Cow position:
Alignm length: 224
Alignm identity: 155
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 41, 54

Conread position: 23-242
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 23-249
Cow position:
Alignm length: 231
Alignm identity: 160
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 56, 146

Conread position: 25-209
Cow position:
Alignm length: 189
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 35

Conread position: 25-233
Cow position:
Alignm length: 215
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 142

Conread position: 25-241
Cow position:
Alignm length: 225
Alignm identity: 159
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 37

Conread position: 26-240
Cow position:
Alignm length: 218
Alignm identity: 164
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 46, 33

Conread position: 26-241
Cow position:
Alignm length: 220
Alignm identity: 160
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 76, 22

Conread position: 26-242
Cow position:
Alignm length: 221
Alignm identity: 160
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 79, 42

Conread position: 26-242
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 70, 134

Conread position: 27-237
Cow position:
Alignm length: 212
Alignm identity: 156
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 32, 15

Conread position: 31-241
Cow position:
Alignm length: 215
Alignm identity: 161
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 71, 31

Conread position: 36-234
Cow position:
Alignm length: 204
Alignm identity: 151
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 66, 37

Conread position: 36-241
Cow position:
Alignm length: 210
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 63, 47

Conread position: 36-241
Cow position:
Alignm length: 212
Alignm identity: 155
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 35, 24

Conread position: 36-242
Cow position:
Alignm length: 208
Alignm identity: 148
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 62, 122

Conread position: 37-241
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 67, 23

Conread position: 41-230
Cow position:
Alignm length: 191
Alignm identity: 140
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 55, 50

Conread position: 43-236
Cow position:
Alignm length: 199
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 128

Conread position: 47-241
Cow position:
Alignm length: 201
Alignm identity: 147
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 31, 125

Conread position: 52-241
Cow position:
Alignm length: 190
Alignm identity: 142
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 58-241
Cow position:
Alignm length: 186
Alignm identity: 151
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 45, 112

Conread position: 60-242
Cow position:
Alignm length: 184
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 89, 23

Conread position: 63-222
Cow position:
Alignm length: 164
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 9, 110

Conread position: 63-241
Cow position:
Alignm length: 181
Alignm identity: 145
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 42, 77

Conread position: 66-241
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 75-241
Cow position:
Alignm length: 171
Alignm identity: 133
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 30, 47

Conread position: 89-242
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 90-241
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 94-240
Cow position:
Alignm length: 147
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 95-228
Cow position:
Alignm length: 134
Alignm identity: 107
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 95-241
Cow position:
Alignm length: 147
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 97-241
Cow position:
Alignm length: 145
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 97-241
Cow position:
Alignm length: 145
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 98-241
Cow position:
Alignm length: 144
Alignm identity: 117
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 73, 0

Conread position: 98-241
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 102-243
Cow position:
Alignm length: 142
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 106-241
Cow position:
Alignm length: 137
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 104, 59

Conread position: 123-241
Cow position:
Alignm length: 119
Alignm identity: 99
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 43, 0

Show alignments to all cow chromosomes.