Cow genome map

Conread name: Ss1.1-rcbr0_006154.5

Conread position: 1-196
Cow position:
Alignm length: 202
Alignm identity: 144
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 172

Conread position: 1-203
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 22, 166

Conread position: 1-220
Cow position:
Alignm length: 229
Alignm identity: 168
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 24, 172

Conread position: 1-232
Cow position:
Alignm length: 237
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 14

Conread position: 1-233
Cow position:
Alignm length: 238
Alignm identity: 168
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 16, 21

Conread position: 1-234
Cow position:
Alignm length: 241
Alignm identity: 169
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 14

Conread position: 1-234
Cow position:
Alignm length: 248
Alignm identity: 185
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 24, 48

Conread position: 1-234
Cow position:
Alignm length: 236
Alignm identity: 166
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 77

Conread position: 1-234
Cow position:
Alignm length: 241
Alignm identity: 171
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 19, 14

Conread position: 1-234
Cow position:
Alignm length: 240
Alignm identity: 176
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 14

Conread position: 1-234
Cow position:
Alignm length: 241
Alignm identity: 187
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 19, 14

Conread position: 1-236
Cow position:
Alignm length: 243
Alignm identity: 170
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 10

Conread position: 1-237
Cow position:
Alignm length: 242
Alignm identity: 170
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 90

Conread position: 1-237
Cow position:
Alignm length: 242
Alignm identity: 171
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 22, 68

Conread position: 1-241
Cow position:
Alignm length: 246
Alignm identity: 173
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 22, 57

Conread position: 1-241
Cow position:
Alignm length: 243
Alignm identity: 173
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position:
Alignm length: 244
Alignm identity: 165
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 164

Conread position: 1-241
Cow position:
Alignm length: 247
Alignm identity: 187
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position:
Alignm length: 244
Alignm identity: 165
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position:
Alignm length: 246
Alignm identity: 171
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position:
Alignm length: 246
Alignm identity: 176
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 24, 165

Conread position: 1-241
Cow position:
Alignm length: 247
Alignm identity: 179
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 26, 58

Conread position: 1-241
Cow position:
Alignm length: 244
Alignm identity: 174
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 167

Conread position: 1-241
Cow position:
Alignm length: 246
Alignm identity: 179
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 22, 142

Conread position: 1-241
Cow position:
Alignm length: 244
Alignm identity: 171
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 22, 62

Conread position: 1-241
Cow position:
Alignm length: 247
Alignm identity: 181
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position:
Alignm length: 247
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position:
Alignm length: 245
Alignm identity: 167
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 14, 76

Conread position: 1-241
Cow position:
Alignm length: 249
Alignm identity: 178
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position:
Alignm length: 249
Alignm identity: 171
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 23, 146

Conread position: 1-241
Cow position:
Alignm length: 246
Alignm identity: 175
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 58

Conread position: 1-241
Cow position:
Alignm length: 247
Alignm identity: 173
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 76, 58

Conread position: 1-242
Cow position:
Alignm length: 249
Alignm identity: 182
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 112

Conread position: 1-242
Cow position:
Alignm length: 247
Alignm identity: 170
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 22, 157

Conread position: 2-148
Cow position:
Alignm length: 153
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 2-209
Cow position:
Alignm length: 214
Alignm identity: 165
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 23, 165

Conread position: 2-234
Cow position:
Alignm length: 233
Alignm identity: 162
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 2-241
Cow position:
Alignm length: 245
Alignm identity: 175
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 21, 143

Conread position: 5-231
Cow position:
Alignm length: 233
Alignm identity: 170
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 14, 10

Conread position: 5-241
Cow position:
Alignm length: 240
Alignm identity: 172
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 10, 56

Conread position: 5-241
Cow position:
Alignm length: 243
Alignm identity: 179
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 15, 6

Conread position: 6-241
Cow position:
Alignm length: 240
Alignm identity: 169
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 9, 125

Conread position: 7-231
Cow position:
Alignm length: 226
Alignm identity: 155
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 20, 56

Conread position: 7-234
Cow position:
Alignm length: 229
Alignm identity: 162
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 145, 17

Conread position: 7-241
Cow position:
Alignm length: 244
Alignm identity: 175
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 17, 11

Conread position: 8-241
Cow position:
Alignm length: 241
Alignm identity: 170
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 16, 53

Conread position: 8-258
Cow position:
Alignm length: 263
Alignm identity: 182
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 145

Conread position: 10-240
Cow position:
Alignm length: 233
Alignm identity: 180
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 15, 58

Conread position: 13-241
Cow position:
Alignm length: 238
Alignm identity: 170
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 11, 53

Conread position: 14-234
Cow position:
Alignm length: 228
Alignm identity: 157
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 19, 52

Conread position: 14-241
Cow position:
Alignm length: 233
Alignm identity: 171
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 11, 49

Conread position: 14-241
Cow position:
Alignm length: 233
Alignm identity: 162
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 6, 59

Conread position: 14-241
Cow position:
Alignm length: 232
Alignm identity: 160
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 6, 161

Conread position: 14-259
Cow position:
Alignm length: 261
Alignm identity: 179
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 62

Conread position: 15-242
Cow position:
Alignm length: 233
Alignm identity: 166
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 5, 57

Conread position: 18-241
Cow position:
Alignm length: 229
Alignm identity: 169
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 9, 152

Conread position: 18-241
Cow position:
Alignm length: 230
Alignm identity: 160
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 7, 145

Conread position: 18-241
Cow position:
Alignm length: 227
Alignm identity: 170
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 7, 43

Conread position: 18-241
Cow position:
Alignm length: 226
Alignm identity: 153
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 6, 47

Conread position: 18-253
Cow position:
Alignm length: 241
Alignm identity: 175
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 7, 151

Conread position: 19-230
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 5, 58

Conread position: 19-234
Cow position:
Alignm length: 223
Alignm identity: 157
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 5, 158

Conread position: 19-241
Cow position:
Alignm length: 229
Alignm identity: 160
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 5, 44

Conread position: 19-241
Cow position:
Alignm length: 229
Alignm identity: 161
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 5, 58

Conread position: 19-241
Cow position:
Alignm length: 229
Alignm identity: 162
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 5, 59

Conread position: 19-241
Cow position:
Alignm length: 229
Alignm identity: 170
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 41, 62

Conread position: 20-241
Cow position:
Alignm length: 224
Alignm identity: 168
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 51, 80

Conread position: 22-169
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 22-216
Cow position:
Alignm length: 198
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 76, 46

Conread position: 22-232
Cow position:
Alignm length: 212
Alignm identity: 155
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 55, 79

Conread position: 22-233
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 40, 141

Conread position: 22-233
Cow position:
Alignm length: 217
Alignm identity: 159
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 57, 144

Conread position: 22-234
Cow position:
Alignm length: 214
Alignm identity: 148
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 60, 17

Conread position: 22-234
Cow position:
Alignm length: 217
Alignm identity: 163
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 77, 36

Conread position: 22-241
Cow position:
Alignm length: 224
Alignm identity: 154
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 67, 12

Conread position: 22-241
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 77, 128

Conread position: 22-241
Cow position:
Alignm length: 221
Alignm identity: 151
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 194, 38

Conread position: 22-241
Cow position:
Alignm length: 224
Alignm identity: 156
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 43, 153

Conread position: 22-241
Cow position:
Alignm length: 224
Alignm identity: 163
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 78, 144

Conread position: 23-234
Cow position:
Alignm length: 216
Alignm identity: 153
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 76, 130

Conread position: 23-241
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 78, 53

Conread position: 23-241
Cow position:
Alignm length: 224
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 48

Conread position: 23-241
Cow position:
Alignm length: 222
Alignm identity: 153
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 10, 123

Conread position: 23-241
Cow position:
Alignm length: 223
Alignm identity: 163
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 80, 39

Conread position: 23-241
Cow position:
Alignm length: 228
Alignm identity: 162
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 40

Conread position: 23-241
Cow position:
Alignm length: 225
Alignm identity: 161
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 56, 25

Conread position: 23-241
Cow position:
Alignm length: 225
Alignm identity: 160
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 54

Conread position: 23-241
Cow position:
Alignm length: 223
Alignm identity: 161
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 59, 148

Conread position: 23-241
Cow position:
Alignm length: 223
Alignm identity: 152
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 79, 29

Conread position: 24-233
Cow position:
Alignm length: 210
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 25-241
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 65, 32

Conread position: 25-242
Cow position:
Alignm length: 224
Alignm identity: 164
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 126

Conread position: 26-241
Cow position:
Alignm length: 222
Alignm identity: 164
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 45, 137

Conread position: 26-253
Cow position:
Alignm length: 242
Alignm identity: 173
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 76, 0

Conread position: 27-194
Cow position:
Alignm length: 169
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 127

Conread position: 27-225
Cow position:
Alignm length: 203
Alignm identity: 149
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 71, 120

Conread position: 27-234
Cow position:
Alignm length: 212
Alignm identity: 151
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 76, 31

Conread position: 27-245
Cow position:
Alignm length: 224
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 72, 35

Conread position: 32-241
Cow position:
Alignm length: 215
Alignm identity: 154
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 67, 32

Conread position: 34-240
Cow position:
Alignm length: 211
Alignm identity: 155
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 68, 130

Conread position: 37-234
Cow position:
Alignm length: 202
Alignm identity: 158
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 68, 38

Conread position: 37-241
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 32

Conread position: 38-234
Cow position:
Alignm length: 198
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 26

Conread position: 42-241
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 38, 29

Conread position: 53-241
Cow position:
Alignm length: 190
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 63, 21

Conread position: 61-255
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 109

Conread position: 62-241
Cow position:
Alignm length: 184
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 6

Conread position: 64-241
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 6, 0

Conread position: 77-241
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 87, 0

Conread position: 83-242
Cow position:
Alignm length: 164
Alignm identity: 131
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 22, 39

Conread position: 94-241
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 97-232
Cow position:
Alignm length: 136
Alignm identity: 105
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 97-237
Cow position:
Alignm length: 141
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 97-241
Cow position:
Alignm length: 145
Alignm identity: 118
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 97-242
Cow position:
Alignm length: 146
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 98-241
Cow position:
Alignm length: 144
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 107-241
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 40, 66

Show alignments to all cow chromosomes.