Cow genome map
| Conread name: | Ss1.1-rche27_k7.5 |
| Conread position: | 1-451 |
| Cow position: | chr13:22125438-22125889 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 265 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 6, 346 |
| Conread position: | 1-525 |
| Cow position: | chr13:39930654-39931176 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 47 |
| Conread position: | 1-667 |
| Cow position: | chr13:24162745-24163411 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 400 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 79, 72 |
| Conread position: | 1-712 |
| Cow position: | chr13:22124851-22125562 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 104 |
| Conread position: | 1-744 |
| Cow position: | chr13:24162577-24163320 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 104 |
| Conread position: | 4-658 |
| Cow position: | chr13:39984245-39984899 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 374 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 641, 633 |
| Conread position: | 4-667 |
| Cow position: | chr13:22125190-22125852 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 391 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 39, 45 |
| Conread position: | 4-667 |
| Cow position: | chr13:24162916-24163578 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 390 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 39, 45 |
| Conread position: | 8-709 |
| Cow position: | chr13:22124942-22125643 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 32 |
| Conread position: | 8-709 |
| Cow position: | chr13:24162668-24163369 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 29 |
| Conread position: | 15-744 |
| Cow position: | chr13:22124697-22125426 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 43 |
| Conread position: | 15-744 |
| Cow position: | chr13:24162423-24163152 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 43 |
| Conread position: | 17-555 |
| Cow position: | chr13:22125371-22125909 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 320 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 97, 88 |
| Conread position: | 17-673 |
| Cow position: | chr13:24162509-24163165 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 180 |
| Conread position: | 46-720 |
| Cow position: | chr13:22125148-22125824 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 396 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 539, 543 |
| Conread position: | 46-723 |
| Cow position: | chr13:39984119-39984795 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 388 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 149, 160 |
| Conread position: | 46-743 |
| Cow position: | chr13:24162874-24163571 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 405 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 539, 543 |
| Conread position: | 66-583 |
| Cow position: | chr13:39930635-39931152 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 126 |
| Conread position: | 122-694 |
| Cow position: | chr13:39930607-39931177 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 432, 427 |
| Conread position: | 150-704 |
| Cow position: | chr13:39983971-39984525 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 316 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 40, 51 |
| Conread position: | 219-712 |
| Cow position: | chr13:39930620-39931113 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 335, 330 |
| Conread position: | 223-704 |
| Cow position: | chr13:39983960-39984441 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 275 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 267-712 |
| Cow position: | chr13:39930584-39931029 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 282 |
| Conread position: | 364-747 |
| Cow position: | chr13:22124710-22125093 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 90, 114 |
| Conread position: | 388-711 |
| Cow position: | chr13:56292141-56291817 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 204 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 149, 142 |
Show alignments to all cow chromosomes.