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Cow genome map

           
Conread name:
           
Ss1.1-rche27_k7.5
        

               
Conread position:
               
1-245
               

               
Cow position:
               
chr18:56329085-56328841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
136, 142
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr18:55524074-55524326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
48, 43
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr18:1418264-1418549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr18:43048718-43048380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 35
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr18:52012013-52011567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
46, 32
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr18:44240355-44240806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
261, 250
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr18:49032532-49032082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
441, 0
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr18:42984962-42984481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
385, 392
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr18:50295366-50295869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
121, 128
               

               
Conread position:
               
1-529
               

               
Cow position:
               
chr18:49022740-49023268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
296, 316
               

               
Conread position:
               
1-565
               

               
Cow position:
               
chr18:43022557-43021996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
45, 36
               

               
Conread position:
               
1-575
               

               
Cow position:
               
chr18:33064172-33063598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
39, 34
               

               
Conread position:
               
1-575
               

               
Cow position:
               
chr18:40306767-40307341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
40, 49
               

               
Conread position:
               
1-575
               

               
Cow position:
               
chr18:41948918-41948344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
129, 139
               

               
Conread position:
               
1-580
               

               
Cow position:
               
chr18:44398093-44397513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 57
               

               
Conread position:
               
1-583
               

               
Cow position:
               
chr18:42792318-42792902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
189, 201
               

               
Conread position:
               
1-609
               

               
Cow position:
               
chr18:44154273-44153672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
132, 140
               

               
Conread position:
               
1-613
               

               
Cow position:
               
chr18:42744455-42743843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
129, 142
               

               
Conread position:
               
1-664
               

               
Cow position:
               
chr18:56329505-56328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
666
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 142
               

               
Conread position:
               
1-669
               

               
Cow position:
               
chr18:42960037-42959377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
204, 210
               

               
Conread position:
               
1-673
               

               
Cow position:
               
chr18:50848429-50849101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 346
               

               
Conread position:
               
1-675
               

               
Cow position:
               
chr18:43175178-43174504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
114, 110
               

               
Conread position:
               
1-677
               

               
Cow position:
               
chr18:53636034-53635358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 136
               

               
Conread position:
               
1-677
               

               
Cow position:
               
chr18:56128131-56128807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 136
               

               
Conread position:
               
1-684
               

               
Cow position:
               
chr18:50049217-50048530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 146
               

               
Conread position:
               
1-693
               

               
Cow position:
               
chr18:49032784-49032092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 142
               

               
Conread position:
               
1-703
               

               
Cow position:
               
chr18:41197585-41198286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 110
               

               
Conread position:
               
1-703
               

               
Cow position:
               
chr18:41197837-41198538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
119, 109
               

               
Conread position:
               
1-703
               

               
Cow position:
               
chr18:53610457-53609755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 39
               

               
Conread position:
               
1-704
               

               
Cow position:
               
chr18:33064340-33063637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 56
               

               
Conread position:
               
1-704
               

               
Cow position:
               
chr18:50098985-50099688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
26, 39
               

               
Conread position:
               
1-704
               

               
Cow position:
               
chr18:53635950-53635247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
389, 393
               

               
Conread position:
               
1-704
               

               
Cow position:
               
chr18:56128215-56128918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 216
               

               
Conread position:
               
1-709
               

               
Cow position:
               
chr18:49033036-49032328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 136
               

               
Conread position:
               
1-710
               

               
Cow position:
               
chr18:56329673-56328964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 104
               

               
Conread position:
               
1-710
               

               
Cow position:
               
chr18:56329925-56329216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 346
               

               
Conread position:
               
1-721
               

               
Cow position:
               
chr18:42791982-42792702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-721
               

               
Cow position:
               
chr18:50059529-50058809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 110
               

               
Conread position:
               
1-722
               

               
Cow position:
               
chr18:33064928-33064207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 49
               

               
Conread position:
               
1-722
               

               
Cow position:
               
chr18:42985214-42984493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
121, 110
               

               
Conread position:
               
1-722
               

               
Cow position:
               
chr18:53635614-53634895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 61
               

               
Conread position:
               
1-725
               

               
Cow position:
               
chr18:43120313-43119591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
300, 316
               

               
Conread position:
               
1-732
               

               
Cow position:
               
chr18:56128551-56129280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 61
               

               
Conread position:
               
1-733
               

               
Cow position:
               
chr18:43023061-43022329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
735
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 36
               

               
Conread position:
               
1-733
               

               
Cow position:
               
chr18:56330177-56329448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
735
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 191
               

               
Conread position:
               
1-735
               

               
Cow position:
               
chr18:42791142-42791876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
739
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
26, 56
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr18:50246003-50246745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
748
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 37
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr18:55523570-55524312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
748
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 56
               

               
Conread position:
               
1-747
               

               
Cow position:
               
chr18:56248065-56247315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
768
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
117, 110
               

               
Conread position:
               
2-670
               

               
Cow position:
               
chr18:14454009-14453341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
135, 141
               

               
Conread position:
               
3-302
               

               
Cow position:
               
chr18:40075287-40075586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
45, 30
               

               
Conread position:
               
3-524
               

               
Cow position:
               
chr18:51751987-51751470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
190, 199
               

               
Conread position:
               
3-672
               

               
Cow position:
               
chr18:50281686-50282355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
673
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 59
               

               
Conread position:
               
3-673
               

               
Cow position:
               
chr18:50271473-50272143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
673
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 108
               

               
Conread position:
               
3-697
               

               
Cow position:
               
chr18:51400294-51400986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
696
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
532, 18
               

               
Conread position:
               
3-703
               

               
Cow position:
               
chr18:53559770-53560470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 78
               

               
Conread position:
               
3-704
               

               
Cow position:
               
chr18:50295200-50295900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
157, 141
               

               
Conread position:
               
4-263
               

               
Cow position:
               
chr18:1418351-1418610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-453
               

               
Cow position:
               
chr18:42792489-42792938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
329, 350
               

               
Conread position:
               
4-482
               

               
Cow position:
               
chr18:55066845-55066367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
24, 43
               

               
Conread position:
               
4-523
               

               
Cow position:
               
chr18:52428486-52429004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
133, 139
               

               
Conread position:
               
4-530
               

               
Cow position:
               
chr18:54967048-54967574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
337, 342
               

               
Conread position:
               
4-535
               

               
Cow position:
               
chr18:52433667-52434198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
133, 139
               

               
Conread position:
               
4-545
               

               
Cow position:
               
chr18:53509503-53510043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
26, 53
               

               
Conread position:
               
4-564
               

               
Cow position:
               
chr18:53509419-53509979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
25, 42
               

               
Conread position:
               
4-574
               

               
Cow position:
               
chr18:44240274-44240844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
307, 285
               

               
Conread position:
               
4-592
               

               
Cow position:
               
chr18:50848852-50849440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 205
               

               
Conread position:
               
4-592
               

               
Cow position:
               
chr18:53586482-53585894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
38, 53
               

               
Conread position:
               
4-619
               

               
Cow position:
               
chr18:53525873-53526486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
125, 143
               

               
Conread position:
               
4-622
               

               
Cow position:
               
chr18:43093405-43092788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
114, 102
               

               
Conread position:
               
4-667
               

               
Cow position:
               
chr18:53560107-53560770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
39, 46
               

               
Conread position:
               
4-668
               

               
Cow position:
               
chr18:56493857-56494521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
668
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 35
               

               
Conread position:
               
4-669
               

               
Cow position:
               
chr18:42675056-42674391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
308, 312
               

               
Conread position:
               
4-669
               

               
Cow position:
               
chr18:43022638-43021973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
66, 58
               

               
Conread position:
               
4-669
               

               
Cow position:
               
chr18:43167889-43168554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
668
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
189, 198
               

               
Conread position:
               
4-670
               

               
Cow position:
               
chr18:40075036-40075702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
85, 77
               

               
Conread position:
               
4-671
               

               
Cow position:
               
chr18:52428234-52428901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
120, 139
               

               
Conread position:
               
4-671
               

               
Cow position:
               
chr18:52433415-52434082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
191, 198
               

               
Conread position:
               
4-672
               

               
Cow position:
               
chr18:42792237-42792905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
670
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 102
               

               
Conread position:
               
4-677
               

               
Cow position:
               
chr18:44184705-44184032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
129, 139
               

               
Conread position:
               
4-691
               

               
Cow position:
               
chr18:42693615-42692928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 198
               

               
Conread position:
               
4-691
               

               
Cow position:
               
chr18:42694035-42693348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 34
               

               
Conread position:
               
4-691
               

               
Cow position:
               
chr18:53586902-53586215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 32
               

               
Conread position:
               
4-692
               

               
Cow position:
               
chr18:53498150-53498844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
124, 139
               

               
Conread position:
               
4-693
               

               
Cow position:
               
chr18:50083463-50084152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 36
               

               
Conread position:
               
4-693
               

               
Cow position:
               
chr18:54967384-54968068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
32, 54
               

               
Conread position:
               
4-693
               

               
Cow position:
               
chr18:54967717-54968404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
61, 48
               

               
Conread position:
               
4-693
               

               
Cow position:
               
chr18:54979573-54980262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
337, 343
               

               
Conread position:
               
4-693
               

               
Cow position:
               
chr18:54992833-54993522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
127, 137
               

               
Conread position:
               
4-693
               

               
Cow position:
               
chr18:55008572-55009261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
696
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
121, 139
               

               
Conread position:
               
4-693
               

               
Cow position:
               
chr18:55018145-55018836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
696
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
337, 343
               

               
Conread position:
               
4-697
               

               
Cow position:
               
chr18:33064589-33063896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 343
               

               
Conread position:
               
4-697
               

               
Cow position:
               
chr18:55017893-55018586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
114, 107
               

               
Conread position:
               
4-698
               

               
Cow position:
               
chr18:42790977-42791671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
117, 108
               

               
Conread position:
               
4-698
               

               
Cow position:
               
chr18:54979741-54980435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
58, 41
               

               
Conread position:
               
4-699
               

               
Cow position:
               
chr18:53635695-53635001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 169
               

               
Conread position:
               
4-699
               

               
Cow position:
               
chr18:56128470-56129164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 169
               

               
Conread position:
               
4-703
               

               
Cow position:
               
chr18:42693867-42693168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 198
               

               
Conread position:
               
4-703
               

               
Cow position:
               
chr18:42744620-42743921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 32
               

               
Conread position:
               
4-703
               

               
Cow position:
               
chr18:42837839-42837140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 139
               

               
Conread position:
               
4-703
               

               
Cow position:
               
chr18:43093981-43093295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
191, 198
               

               
Conread position:
               
4-703
               

               
Cow position:
               
chr18:44184873-44184174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
297, 336
               

               
Conread position:
               
4-704
               

               
Cow position:
               
chr18:41949167-41948467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 341
               

               
Conread position:
               
4-704
               

               
Cow position:
               
chr18:42791733-42792433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 205
               

               
Conread position:
               
4-708
               

               
Cow position:
               
chr18:44240022-44240726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
26, 41
               

               
Conread position:
               
4-710
               

               
Cow position:
               
chr18:42675224-42674518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
119, 137
               

               
Conread position:
               
4-712
               

               
Cow position:
               
chr18:42792153-42792861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 194
               

               
Conread position:
               
4-716
               

               
Cow position:
               
chr18:50848516-50849228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 333
               

               
Conread position:
               
4-721
               

               
Cow position:
               
chr18:41197672-41198389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 274
               

               
Conread position:
               
4-725
               

               
Cow position:
               
chr18:50848684-50849403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 135
               

               
Conread position:
               
4-726
               

               
Cow position:
               
chr18:56329586-56328866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 290
               

               
Conread position:
               
4-733
               

               
Cow position:
               
chr18:54993169-54993898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
47, 61
               

               
Conread position:
               
4-734
               

               
Cow position:
               
chr18:50848600-50849330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 218
               

               
Conread position:
               
4-736
               

               
Cow position:
               
chr18:49032865-49032133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 108
               

               
Conread position:
               
4-738
               

               
Cow position:
               
chr18:42985547-42984813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
210, 199
               

               
Conread position:
               
4-742
               

               
Cow position:
               
chr18:50059106-50058370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 212
               

               
Conread position:
               
4-742
               

               
Cow position:
               
chr18:53559939-53560677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 43
               

               
Conread position:
               
4-743
               

               
Cow position:
               
chr18:52012346-52011607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
741
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 343
               

               
Conread position:
               
4-743
               

               
Cow position:
               
chr18:56330090-56329351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
743
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 54
               

               
Conread position:
               
4-746
               

               
Cow position:
               
chr18:44398258-44397515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
118, 134
               

               
Conread position:
               
5-499
               

               
Cow position:
               
chr18:56316567-56317061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
118, 108
               

               
Conread position:
               
5-507
               

               
Cow position:
               
chr18:1418100-1418602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
76, 70
               

               
Conread position:
               
5-698
               

               
Cow position:
               
chr18:54967637-54968325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
20, 32
               

               
Conread position:
               
5-704
               

               
Cow position:
               
chr18:50059357-50058658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 37
               

               
Conread position:
               
5-722
               

               
Cow position:
               
chr18:40086416-40085708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
5-743
               

               
Cow position:
               
chr18:53560024-53560762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
24, 45
               

               
Conread position:
               
6-651
               

               
Cow position:
               
chr18:55067011-55066366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 51
               

               
Conread position:
               
6-698
               

               
Cow position:
               
chr18:52012260-52011568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 35
               

               
Conread position:
               
6-706
               

               
Cow position:
               
chr18:56316316-56317016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 313
               

               
Conread position:
               
6-743
               

               
Cow position:
               
chr18:53586732-53585995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
745
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 33
               

               
Conread position:
               
7-500
               

               
Cow position:
               
chr18:55497522-55497029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
170, 166
               

               
Conread position:
               
7-513
               

               
Cow position:
               
chr18:51400716-51401222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
108, 104
               

               
Conread position:
               
7-592
               

               
Cow position:
               
chr18:55523744-55524329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
115, 104
               

               
Conread position:
               
7-612
               

               
Cow position:
               
chr18:51789373-51788768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
189, 202
               

               
Conread position:
               
7-668
               

               
Cow position:
               
chr18:55497690-55497029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
667
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
291, 312
               

               
Conread position:
               
7-693
               

               
Cow position:
               
chr18:55067094-55066408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 37
               

               
Conread position:
               
7-703
               

               
Cow position:
               
chr18:53525708-53526404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
7-709
               

               
Cow position:
               
chr18:56330003-56329301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 50
               

               
Conread position:
               
7-713
               

               
Cow position:
               
chr18:53509254-53509960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
378, 365
               

               
Conread position:
               
7-721
               

               
Cow position:
               
chr18:56316233-56316947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 264
               

               
Conread position:
               
7-725
               

               
Cow position:
               
chr18:40306353-40307069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 104
               

               
Conread position:
               
7-736
               

               
Cow position:
               
chr18:41197507-41198236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
111, 104
               

               
Conread position:
               
8-417
               

               
Cow position:
               
chr18:56267527-56267118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
39, 28
               

               
Conread position:
               
8-543
               

               
Cow position:
               
chr18:50848940-50849475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
8-575
               

               
Cow position:
               
chr18:56391414-56390847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
170, 165
               

               
Conread position:
               
8-666
               

               
Cow position:
               
chr18:40306690-40307348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
666
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 195
               

               
Conread position:
               
8-693
               

               
Cow position:
               
chr18:42694115-42693430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 30
               

               
Conread position:
               
8-693
               

               
Cow position:
               
chr18:53559691-53560376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
36, 49
               

               
Conread position:
               
8-703
               

               
Cow position:
               
chr18:42960198-42959512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
125, 135
               

               
Conread position:
               
8-711
               

               
Cow position:
               
chr18:56329834-56329131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 270
               

               
Conread position:
               
8-742
               

               
Cow position:
               
chr18:50099580-50100314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
748
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
19, 30
               

               
Conread position:
               
9-421
               

               
Cow position:
               
chr18:56391245-56390833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
169, 164
               

               
Conread position:
               
9-499
               

               
Cow position:
               
chr18:56391329-56390839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
40, 36
               

               
Conread position:
               
9-544
               

               
Cow position:
               
chr18:42724486-42723951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 296
               

               
Conread position:
               
9-693
               

               
Cow position:
               
chr18:42675135-42674451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 134
               

               
Conread position:
               
9-693
               

               
Cow position:
               
chr18:50083384-50084068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
276, 298
               

               
Conread position:
               
9-698
               

               
Cow position:
               
chr18:50022217-50021522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
147, 289
               

               
Conread position:
               
9-704
               

               
Cow position:
               
chr18:50059605-50058910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
696
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
9-704
               

               
Cow position:
               
chr18:50099497-50100192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
208, 200
               

               
Conread position:
               
9-704
               

               
Cow position:
               
chr18:53636110-53635415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
696
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
9-704
               

               
Cow position:
               
chr18:56128055-56128750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 18
               

               
Conread position:
               
9-712
               

               
Cow position:
               
chr18:53586981-53586278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 48
               

               
Conread position:
               
9-733
               

               
Cow position:
               
chr18:40324866-40324142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
18, 39
               

               
Conread position:
               
9-748
               

               
Cow position:
               
chr18:43167810-43168549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 267
               

               
Conread position:
               
13-733
               

               
Cow position:
               
chr18:42791658-42792378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
181, 188
               

               
Conread position:
               
14-535
               

               
Cow position:
               
chr18:51812441-51811921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
30, 19
               

               
Conread position:
               
14-598
               

               
Cow position:
               
chr18:51839370-51838786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
182, 195
               

               
Conread position:
               
14-619
               

               
Cow position:
               
chr18:49022669-49023274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
30, 21
               

               
Conread position:
               
14-619
               

               
Cow position:
               
chr18:51752144-51751538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
15, 33
               

               
Conread position:
               
14-635
               

               
Cow position:
               
chr18:53560201-53560818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
15, 36
               

               
Conread position:
               
14-653
               

               
Cow position:
               
chr18:49032687-49032048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 52
               

               
Conread position:
               
14-669
               

               
Cow position:
               
chr18:56433910-56434555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
661
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
124, 112
               

               
Conread position:
               
14-703
               

               
Cow position:
               
chr18:44398416-44397728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 97
               

               
Conread position:
               
14-704
               

               
Cow position:
               
chr18:56316156-56316846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 28
               

               
Conread position:
               
14-705
               

               
Cow position:
               
chr18:50059264-50058573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 370
               

               
Conread position:
               
14-712
               

               
Cow position:
               
chr18:42791071-42791769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
112, 97
               

               
Conread position:
               
14-721
               

               
Cow position:
               
chr18:51789450-51788743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
104, 96
               

               
Conread position:
               
14-723
               

               
Cow position:
               
chr18:51368159-51367452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
104, 97
               

               
Conread position:
               
14-733
               

               
Cow position:
               
chr18:40324693-40323974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
13, 44
               

               
Conread position:
               
14-733
               

               
Cow position:
               
chr18:51765639-51764920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
13, 31
               

               
Conread position:
               
14-733
               

               
Cow position:
               
chr18:51789534-51788815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 188
               

               
Conread position:
               
14-735
               

               
Cow position:
               
chr18:51812693-51811972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 97
               

               
Conread position:
               
14-743
               

               
Cow position:
               
chr18:50246100-50246829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
735
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 129
               

               
Conread position:
               
14-743
               

               
Cow position:
               
chr18:51368580-51367850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
736
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
34, 98
               

               
Conread position:
               
15-503
               

               
Cow position:
               
chr18:50083810-50084299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
474, 0
               

               
Conread position:
               
15-551
               

               
Cow position:
               
chr18:44253867-44253332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
477, 489
               

               
Conread position:
               
15-552
               

               
Cow position:
               
chr18:43093310-43092775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
107, 120
               

               
Conread position:
               
15-667
               

               
Cow position:
               
chr18:42724564-42723910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
232, 247
               

               
Conread position:
               
15-673
               

               
Cow position:
               
chr18:41949240-41948582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
661
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
181, 188
               

               
Conread position:
               
15-673
               

               
Cow position:
               
chr18:43175332-43174674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
181, 187
               

               
Conread position:
               
15-676
               

               
Cow position:
               
chr18:41948988-41948327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
663
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
326, 332
               

               
Conread position:
               
15-684
               

               
Cow position:
               
chr18:49032938-49032269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
673
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 295
               

               
Conread position:
               
15-684
               

               
Cow position:
               
chr18:49033190-49032521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 332
               

               
Conread position:
               
15-689
               

               
Cow position:
               
chr18:56316409-56317084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
348, 370
               

               
Conread position:
               
15-697
               

               
Cow position:
               
chr18:52446964-52447646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
100, 96
               

               
Conread position:
               
15-698
               

               
Cow position:
               
chr18:42744525-42743842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 21
               

               
Conread position:
               
15-703
               

               
Cow position:
               
chr18:43175500-43174812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
115, 128
               

               
Conread position:
               
15-703
               

               
Cow position:
               
chr18:50083558-50084245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 25
               

               
Conread position:
               
15-703
               

               
Cow position:
               
chr18:52447720-52448409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 24
               

               
Conread position:
               
15-704
               

               
Cow position:
               
chr18:33064410-33063721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 96
               

               
Conread position:
               
15-704
               

               
Cow position:
               
chr18:43093646-43092957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
103, 93
               

               
Conread position:
               
15-704
               

               
Cow position:
               
chr18:51400388-51401077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 106
               

               
Conread position:
               
15-722
               

               
Cow position:
               
chr18:52447468-52448175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 24
               

               
Conread position:
               
15-733
               

               
Cow position:
               
chr18:42693772-42693055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
12, 22
               

               
Conread position:
               
15-733
               

               
Cow position:
               
chr18:56329743-56329028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 279
               

               
Conread position:
               
15-743
               

               
Cow position:
               
chr18:49033106-49032378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 332
               

               
Conread position:
               
16-574
               

               
Cow position:
               
chr18:51400641-51401199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
176, 186
               

               
Conread position:
               
16-722
               

               
Cow position:
               
chr18:52447133-52447839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
533, 545
               

               
Conread position:
               
16-733
               

               
Cow position:
               
chr18:52447385-52448102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 95
               

               
Conread position:
               
16-733
               

               
Cow position:
               
chr18:56247788-56247084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
28, 23
               

               
Conread position:
               
18-474
               

               
Cow position:
               
chr18:51812353-51811897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
18-589
               

               
Cow position:
               
chr18:53586552-53585981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 39
               

               
Conread position:
               
18-619
               

               
Cow position:
               
chr18:51752224-51751623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
124, 118
               

               
Conread position:
               
18-673
               

               
Cow position:
               
chr18:40324605-40323950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
663
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
177, 185
               

               
Conread position:
               
18-697
               

               
Cow position:
               
chr18:52427660-52428339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
18-697
               

               
Cow position:
               
chr18:52433009-52433688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
18-698
               

               
Cow position:
               
chr18:1417945-1418627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 183
               

               
Conread position:
               
18-703
               

               
Cow position:
               
chr18:42837909-42837225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
438, 445
               

               
Conread position:
               
18-721
               

               
Cow position:
               
chr18:42791915-42792618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
416, 405
               

               
Conread position:
               
18-734
               

               
Cow position:
               
chr18:52433261-52433977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 184
               

               
Conread position:
               
18-735
               

               
Cow position:
               
chr18:51765971-51765254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
22-733
               

               
Cow position:
               
chr18:43093556-43092844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
7, 326
               

               
Conread position:
               
28-703
               

               
Cow position:
               
chr18:50059670-50058995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 173
               

               
Conread position:
               
37-728
               

               
Cow position:
               
chr18:42693918-42693227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 167
               

               
Conread position:
               
38-673
               

               
Cow position:
               
chr18:50030938-50030303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 50
               

               
Conread position:
               
38-675
               

               
Cow position:
               
chr18:42791851-42792488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 101
               

               
Conread position:
               
38-710
               

               
Cow position:
               
chr18:50022272-50021596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
153, 163
               

               
Conread position:
               
38-736
               

               
Cow position:
               
chr18:50022443-50021739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
8, 76
               

               
Conread position:
               
39-543
               

               
Cow position:
               
chr18:50021932-50021425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
189, 272
               

               
Conread position:
               
39-742
               

               
Cow position:
               
chr18:50098939-50099642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
249, 259
               

               
Conread position:
               
43-697
               

               
Cow position:
               
chr18:52447244-52447898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
661
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 100
               

               
Conread position:
               
43-704
               

               
Cow position:
               
chr18:51368466-51367806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
663
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
153, 159
               

               
Conread position:
               
43-742
               

               
Cow position:
               
chr18:51789589-51788890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
155, 180
               

               
Conread position:
               
43-742
               

               
Cow position:
               
chr18:51812916-51812217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
415, 404
               

               
Conread position:
               
45-722
               

               
Cow position:
               
chr18:51812830-51812153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
657, 650
               

               
Conread position:
               
47-614
               

               
Cow position:
               
chr18:51400588-51401155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 290
               

               
Conread position:
               
47-673
               

               
Cow position:
               
chr18:49033407-49032784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 6
               

               
Conread position:
               
47-712
               

               
Cow position:
               
chr18:51839505-51838840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
668
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 262
               

               
Conread position:
               
48-703
               

               
Cow position:
               
chr18:52428362-52429017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
666
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
89, 95
               

               
Conread position:
               
48-703
               

               
Cow position:
               
chr18:52433543-52434198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
665
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
147, 154
               

               
Conread position:
               
48-734
               

               
Cow position:
               
chr18:52428110-52428796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 154
               

               
Conread position:
               
54-743
               

               
Cow position:
               
chr18:43167771-43168460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 266
               

               
Conread position:
               
56-674
               

               
Cow position:
               
chr18:56391450-56390832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
249, 254
               

               
Conread position:
               
56-743
               

               
Cow position:
               
chr18:55523541-55524228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 87
               

               
Conread position:
               
57-697
               

               
Cow position:
               
chr18:52428203-52428843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
80, 86
               

               
Conread position:
               
57-697
               

               
Cow position:
               
chr18:52433384-52434024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
138, 147
               

               
Conread position:
               
63-697
               

               
Cow position:
               
chr18:52427957-52428591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
132, 157
               

               
Conread position:
               
63-697
               

               
Cow position:
               
chr18:52433138-52433772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
74, 80
               

               
Conread position:
               
64-530
               

               
Cow position:
               
chr18:44154126-44153667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
223, 144
               

               
Conread position:
               
64-570
               

               
Cow position:
               
chr18:42837611-42837105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
66, 76
               

               
Conread position:
               
64-583
               

               
Cow position:
               
chr18:43048739-43048222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
73, 79
               

               
Conread position:
               
64-671
               

               
Cow position:
               
chr18:51752345-51751739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
49, 17
               

               
Conread position:
               
64-673
               

               
Cow position:
               
chr18:56247656-56247059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
190, 152
               

               
Conread position:
               
64-684
               

               
Cow position:
               
chr18:33093117-33092497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
64-693
               

               
Cow position:
               
chr18:42675332-42674703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 243
               

               
Conread position:
               
64-703
               

               
Cow position:
               
chr18:43175535-43174896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
66, 79
               

               
Conread position:
               
64-704
               

               
Cow position:
               
chr18:41197984-41198624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
131, 137
               

               
Conread position:
               
64-708
               

               
Cow position:
               
chr18:40074928-40075572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
64, 60
               

               
Conread position:
               
64-733
               

               
Cow position:
               
chr18:52447685-52448355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 47
               

               
Conread position:
               
65-693
               

               
Cow position:
               
chr18:50245983-50246611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 65
               

               
Conread position:
               
65-703
               

               
Cow position:
               
chr18:50848409-50849047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 48
               

               
Conread position:
               
65-704
               

               
Cow position:
               
chr18:52012369-52011730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
223, 269
               

               
Conread position:
               
65-711
               

               
Cow position:
               
chr18:56330197-56329551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
655
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 138
               

               
Conread position:
               
66-711
               

               
Cow position:
               
chr18:51400271-51400916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 224
               

               
Conread position:
               
66-721
               

               
Cow position:
               
chr18:42694141-42693486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
127, 136
               

               
Conread position:
               
66-743
               

               
Cow position:
               
chr18:40306496-40307173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 77
               

               
Conread position:
               
68-420
               

               
Cow position:
               
chr18:42724259-42723907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
224, 241
               

               
Conread position:
               
68-703
               

               
Cow position:
               
chr18:51400525-51401161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 136
               

               
Conread position:
               
68-704
               

               
Cow position:
               
chr18:53635715-53635079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 242
               

               
Conread position:
               
68-709
               

               
Cow position:
               
chr18:51367853-51367213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
57, 43
               

               
Conread position:
               
68-742
               

               
Cow position:
               
chr18:56128450-56129124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 134
               

               
Conread position:
               
69-501
               

               
Cow position:
               
chr18:49021729-49022162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
121, 135
               

               
Conread position:
               
69-508
               

               
Cow position:
               
chr18:14453294-14452855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
49, 42
               

               
Conread position:
               
69-592
               

               
Cow position:
               
chr18:56434375-56434897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
147, 134
               

               
Conread position:
               
69-619
               

               
Cow position:
               
chr18:44154460-44153908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
81, 251
               

               
Conread position:
               
69-693
               

               
Cow position:
               
chr18:54979890-54980514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
49, 42
               

               
Conread position:
               
69-703
               

               
Cow position:
               
chr18:51367936-51367303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
56, 43
               

               
Conread position:
               
70-697
               

               
Cow position:
               
chr18:52427544-52428171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
58, 41
               

               
Conread position:
               
70-703
               

               
Cow position:
               
chr18:44184891-44184259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
142, 136
               

               
Conread position:
               
72-693
               

               
Cow position:
               
chr18:33064941-33064320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 274
               

               
Conread position:
               
72-693
               

               
Cow position:
               
chr18:56493841-56494462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 130
               

               
Conread position:
               
73-703
               

               
Cow position:
               
chr18:49022311-49022937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
222, 5
               

               
Conread position:
               
75-673
               

               
Cow position:
               
chr18:53610467-53609869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
43, 35
               

               
Conread position:
               
75-704
               

               
Cow position:
               
chr18:56316049-56316678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
441, 448
               

               
Conread position:
               
75-712
               

               
Cow position:
               
chr18:53509238-53509875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
42, 68
               

               
Conread position:
               
75-721
               

               
Cow position:
               
chr18:42724588-42723942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 230
               

               
Conread position:
               
75-721
               

               
Cow position:
               
chr18:54967035-54967681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
142, 137
               

               
Conread position:
               
76-736
               

               
Cow position:
               
chr18:42791637-42792297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
662
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
647, 654
               

               
Conread position:
               
77-722
               

               
Cow position:
               
chr18:42744715-42744070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
53, 66
               

               
Conread position:
               
78-667
               

               
Cow position:
               
chr18:22844366-22843772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
64, 58
               

               
Conread position:
               
84-710
               

               
Cow position:
               
chr18:56391590-56390964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
94, 89
               

               
Conread position:
               
87-735
               

               
Cow position:
               
chr18:51839549-51838901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
653
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
108, 124
               

               
Conread position:
               
99-733
               

               
Cow position:
               
chr18:43175584-43174950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
217, 241
               

               
Conread position:
               
105-743
               

               
Cow position:
               
chr18:50059678-50059039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
13, 102
               

               
Conread position:
               
113-710
               

               
Cow position:
               
chr18:42960345-42959748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
82, 95
               

               
Conread position:
               
113-735
               

               
Cow position:
               
chr18:33064984-33064362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 38
               

               
Conread position:
               
114-733
               

               
Cow position:
               
chr18:41949309-41948690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
252, 259
               

               
Conread position:
               
133-714
               

               
Cow position:
               
chr18:1417976-1418556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 222
               

               
Conread position:
               
133-747
               

               
Cow position:
               
chr18:50083340-50083956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
78, 70
               

               
Conread position:
               
136-673
               

               
Cow position:
               
chr18:42694155-42693618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
318, 327
               

               
Conread position:
               
137-697
               

               
Cow position:
               
chr18:51400258-51400818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 69
               

               
Conread position:
               
138-743
               

               
Cow position:
               
chr18:53587020-53586415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
74, 83
               

               
Conread position:
               
140-640
               

               
Cow position:
               
chr18:55497641-55497141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
145, 173
               

               
Conread position:
               
140-743
               

               
Cow position:
               
chr18:56128438-56129041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
490, 486
               

               
Conread position:
               
141-693
               

               
Cow position:
               
chr18:40306235-40306787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
49, 62
               

               
Conread position:
               
141-704
               

               
Cow position:
               
chr18:42790946-42791509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
192, 206
               

               
Conread position:
               
141-706
               

               
Cow position:
               
chr18:52012459-52011896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
164, 13
               

               
Conread position:
               
141-711
               

               
Cow position:
               
chr18:40074921-40075491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
58, 51
               

               
Conread position:
               
141-712
               

               
Cow position:
               
chr18:50245975-50246546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
68, 74
               

               
Conread position:
               
141-712
               

               
Cow position:
               
chr18:50281740-50282311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
65, 74
               

               
Conread position:
               
141-712
               

               
Cow position:
               
chr18:50295254-50295825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
106, 99
               

               
Conread position:
               
141-716
               

               
Cow position:
               
chr18:53498035-53498614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
66, 85
               

               
Conread position:
               
141-721
               

               
Cow position:
               
chr18:49022628-49023208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
250, 241
               

               
Conread position:
               
141-743
               

               
Cow position:
               
chr18:50271443-50272045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
144, 172
               

               
Conread position:
               
142-673
               

               
Cow position:
               
chr18:14454037-14453506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
170, 155
               

               
Conread position:
               
146-744
               

               
Cow position:
               
chr18:56316036-56316634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
117, 109
               

               
Conread position:
               
151-742
               

               
Cow position:
               
chr18:51752342-51751752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
48, 11
               

               
Conread position:
               
152-654
               

               
Cow position:
               
chr18:42827398-42827899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
146, 5
               

               
Conread position:
               
153-711
               

               
Cow position:
               
chr18:56391437-56390879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
157, 144
               

               
Conread position:
               
153-721
               

               
Cow position:
               
chr18:53610473-53609905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
40, 48
               

               
Conread position:
               
153-722
               

               
Cow position:
               
chr18:43022573-43022004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
301, 309
               

               
Conread position:
               
153-722
               

               
Cow position:
               
chr18:53509232-53509801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
61, 73
               

               
Conread position:
               
153-733
               

               
Cow position:
               
chr18:53525686-53526266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
61, 73
               

               
Conread position:
               
154-697
               

               
Cow position:
               
chr18:49022725-49023268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
45, 38
               

               
Conread position:
               
154-703
               

               
Cow position:
               
chr18:42744722-42744173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
235, 239
               

               
Conread position:
               
154-721
               

               
Cow position:
               
chr18:56493839-56494406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 66
               

               
Conread position:
               
161-673
               

               
Cow position:
               
chr18:56330185-56329673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 149
               

               
Conread position:
               
164-709
               

               
Cow position:
               
chr18:49033377-49032832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
482, 468
               

               
Conread position:
               
164-721
               

               
Cow position:
               
chr18:50281679-50282236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
31, 37
               

               
Conread position:
               
165-747
               

               
Cow position:
               
chr18:50083288-50083872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
120, 131
               

               
Conread position:
               
167-743
               

               
Cow position:
               
chr18:55523316-55523892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
471, 460
               

               
Conread position:
               
170-693
               

               
Cow position:
               
chr18:53559685-53560208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
48, 36
               

               
Conread position:
               
171-703
               

               
Cow position:
               
chr18:40306181-40306712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
524, 0
               

               
Conread position:
               
193-734
               

               
Cow position:
               
chr18:52433101-52433641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
119, 12
               

               
Conread position:
               
197-742
               

               
Cow position:
               
chr18:50059669-50059124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
89, 115
               

               
Conread position:
               
198-704
               

               
Cow position:
               
chr18:42724801-42724295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
100, 123
               

               
Conread position:
               
205-734
               

               
Cow position:
               
chr18:51766036-51765507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
189, 184
               

               
Conread position:
               
223-712
               

               
Cow position:
               
chr18:42790944-42791433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
123, 115
               

               
Conread position:
               
224-716
               

               
Cow position:
               
chr18:53636063-53635571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
109, 123
               

               
Conread position:
               
225-508
               

               
Cow position:
               
chr18:55442332-55442615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
270, 280
               

               
Conread position:
               
232-722
               

               
Cow position:
               
chr18:33093117-33092627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 21
               

               
Conread position:
               
237-683
               

               
Cow position:
               
chr18:50848329-50848775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
312, 317
               

               
Conread position:
               
237-716
               

               
Cow position:
               
chr18:56128115-56128594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
238-743
               

               
Cow position:
               
chr18:33064943-33064438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
74, 98
               

               
Conread position:
               
243-672
               

               
Cow position:
               
chr18:14453288-14452859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
62, 74
               

               
Conread position:
               
244-743
               

               
Cow position:
               
chr18:55523308-55523808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
18, 147
               

               
Conread position:
               
245-743
               

               
Cow position:
               
chr18:53636126-53635628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
43, 59
               

               
Conread position:
               
245-743
               

               
Cow position:
               
chr18:56128039-56128537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
88, 102
               

               
Conread position:
               
252-721
               

               
Cow position:
               
chr18:49033373-49032904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 50
               

               
Conread position:
               
261-706
               

               
Cow position:
               
chr18:55497688-55497243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
27, 49
               

               
Conread position:
               
266-693
               

               
Cow position:
               
chr18:49021674-49022102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
56, 21
               

               
Conread position:
               
307-721
               

               
Cow position:
               
chr18:50022510-50022093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
5, 11
               

               
Conread position:
               
308-747
               

               
Cow position:
               
chr18:1417983-1418424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
197, 189
               

               
Conread position:
               
309-664
               

               
Cow position:
               
chr18:56267478-56267122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
24, 38
               

               
Conread position:
               
309-713
               

               
Cow position:
               
chr18:55067044-55066640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
65, 72
               

               
Conread position:
               
312-743
               

               
Cow position:
               
chr18:56493740-56494176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
34, 256
               

               
Conread position:
               
315-711
               

               
Cow position:
               
chr18:51400186-51400580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
321-671
               

               
Cow position:
               
chr18:56248165-56247821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 26
               

               
Conread position:
               
321-698
               

               
Cow position:
               
chr18:52446934-52447311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
67, 74
               

               
Conread position:
               
321-707
               

               
Cow position:
               
chr18:53559752-53560138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
20, 34
               

               
Conread position:
               
321-712
               

               
Cow position:
               
chr18:51400358-51400749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
74, 69
               

               
Conread position:
               
321-733
               

               
Cow position:
               
chr18:51839397-51838987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
321-736
               

               
Cow position:
               
chr18:42827484-42827897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
382, 13
               

               
Conread position:
               
321-743
               

               
Cow position:
               
chr18:33093112-33092690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
5, 21
               

               
Conread position:
               
330-707
               

               
Cow position:
               
chr18:53636125-53635748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
64, 49
               

               
Conread position:
               
336-743
               

               
Cow position:
               
chr18:1417927-1418334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
199, 190
               

               
Conread position:
               
345-724
               

               
Cow position:
               
chr18:44398421-44398044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
22, 15
               

               
Conread position:
               
354-625
               

               
Cow position:
               
chr18:55442293-55442564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
109, 99
               

               
Conread position:
               
360-721
               

               
Cow position:
               
chr18:50848367-50848729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
7, 190
               

               
Conread position:
               
360-725
               

               
Cow position:
               
chr18:14453256-14452892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
6, 102
               

               
Conread position:
               
360-735
               

               
Cow position:
               
chr18:50295221-50295596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
93, 104
               

               
Conread position:
               
365-698
               

               
Cow position:
               
chr18:55497668-55497335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
368-742
               

               
Cow position:
               
chr18:49021692-49022066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
133, 138
               

               
Conread position:
               
384-744
               

               
Cow position:
               
chr18:42694075-42693715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
150, 144
               

               
Conread position:
               
388-743
               

               
Cow position:
               
chr18:42693987-42693632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
107, 117
               

               
Conread position:
               
388-743
               

               
Cow position:
               
chr18:43167769-43168124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
59, 75
               

               
Conread position:
               
392-712
               

               
Cow position:
               
chr18:42827469-42827789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
392-713
               

               
Cow position:
               
chr18:55067045-55066724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
62, 67
               

               
Conread position:
               
393-691
               

               
Cow position:
               
chr18:56434195-56434493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
393-711
               

               
Cow position:
               
chr18:56248175-56247860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
65, 9
               

               
Conread position:
               
393-736
               

               
Cow position:
               
chr18:43048662-43048319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
240, 250
               

               
Conread position:
               
393-743
               

               
Cow position:
               
chr18:49033316-49032966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
156, 161
               

               
Conread position:
               
396-722
               

               
Cow position:
               
chr18:42675336-42675010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
141, 135
               

               
Conread position:
               
398-736
               

               
Cow position:
               
chr18:40306324-40306659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
137, 133
               

               
Conread position:
               
405-733
               

               
Cow position:
               
chr18:42744555-42744227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
228, 240
               

               
Conread position:
               
408-742
               

               
Cow position:
               
chr18:41949351-41949017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
46, 53
               

               
Conread position:
               
411-721
               

               
Cow position:
               
chr18:14453288-14452978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
126, 120
               

               
Conread position:
               
414-733
               

               
Cow position:
               
chr18:51789722-51789403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
54, 50
               

               
Conread position:
               
415-710
               

               
Cow position:
               
chr18:44398435-44398140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
120, 116
               

               
Conread position:
               
420-721
               

               
Cow position:
               
chr18:41197500-41197801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
31, 22
               

               
Conread position:
               
425-733
               

               
Cow position:
               
chr18:51789627-51789319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
278, 272
               

               
Conread position:
               
438-732
               

               
Cow position:
               
chr18:50281701-50281995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
106, 93
               

               
Conread position:
               
438-735
               

               
Cow position:
               
chr18:50295383-50295680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
203, 189
               

               
Conread position:
               
438-747
               

               
Cow position:
               
chr18:50048944-50048633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
15, 32
               

               
Conread position:
               
463-735
               

               
Cow position:
               
chr18:51752367-51752095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
28, 36
               

               
Conread position:
               
468-693
               

               
Cow position:
               
chr18:14453963-14453738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
81, 95
               

               
Conread position:
               
470-722
               

               
Cow position:
               
chr18:44398464-44398212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
41, 27
               

               
Conread position:
               
476-743
               

               
Cow position:
               
chr18:56267479-56267212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
170, 156
               

               
Conread position:
               
477-704
               

               
Cow position:
               
chr18:55497640-55497413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 28
               

               
Conread position:
               
477-735
               

               
Cow position:
               
chr18:56248175-56247919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               
Show alignments to all cow chromosomes.