Cow genome map
| Conread name: | Ss1.1-rche27_k7.5 |
| Conread position: | 1-622 |
| Cow position: | chr2:86465610-86466229 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 355 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 290, 309 |
| Conread position: | 1-661 |
| Cow position: | chr2:82799786-82800446 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 104 |
| Conread position: | 1-667 |
| Cow position: | chr2:5875006-5874340 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 405 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 25, 47 |
| Conread position: | 1-667 |
| Cow position: | chr2:86465190-86465858 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 395 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 32 |
| Conread position: | 1-673 |
| Cow position: | chr2:86465442-86466114 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 384 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 286, 307 |
| Conread position: | 1-692 |
| Cow position: | chr2:82799534-82800225 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 461, 444 |
| Conread position: | 1-699 |
| Cow position: | chr2:86465526-86466223 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 400 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 70 |
| Conread position: | 1-703 |
| Cow position: | chr2:78754840-78755539 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 420 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 113, 105 |
| Conread position: | 1-711 |
| Cow position: | chr2:82799618-82800328 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 38 |
| Conread position: | 3-683 |
| Cow position: | chr2:86465108-86465788 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 398 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 24, 45 |
| Conread position: | 3-712 |
| Cow position: | chr2:5875172-5874463 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 102 |
| Conread position: | 4-554 |
| Cow position: | chr2:5874667-5874117 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 344 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 25, 44 |
| Conread position: | 4-693 |
| Cow position: | chr2:78755597-78756285 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 405 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 114, 68 |
| Conread position: | 5-693 |
| Cow position: | chr2:5874834-5874146 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 32 |
| Conread position: | 7-501 |
| Cow position: | chr2:48689527-48689034 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 300 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 42, 32 |
| Conread position: | 8-655 |
| Cow position: | chr2:5874747-5874100 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 391 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 13-711 |
| Cow position: | chr2:82799462-82800160 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 179 |
| Conread position: | 15-693 |
| Cow position: | chr2:5875076-5874398 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 22 |
| Conread position: | 15-726 |
| Cow position: | chr2:82799716-82800425 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 126 |
| Conread position: | 79-743 |
| Cow position: | chr2:5875180-5874516 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 124 |
| Conread position: | 108-743 |
| Cow position: | chr2:82799473-82800108 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 35 |
| Conread position: | 136-743 |
| Cow position: | chr2:86464986-86465596 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 360 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 13, 127 |
| Conread position: | 186-743 |
| Cow position: | chr2:82799467-82800024 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 129 |
| Conread position: | 215-742 |
| Cow position: | chr2:78754802-78755329 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 315 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 123, 136 |
| Conread position: | 234-696 |
| Cow position: | chr2:48689552-48689091 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 287 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 54, 58 |
| Conread position: | 309-744 |
| Cow position: | chr2:5875118-5874683 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 130, 116 |
| Conread position: | 381-721 |
| Cow position: | chr2:78754480-78754816 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 211 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 160, 166 |
| Conread position: | 383-704 |
| Cow position: | chr2:48689487-48689167 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 171, 73 |
Show alignments to all cow chromosomes.