Cow genome map
| Conread name: | Ss1.1-rche27_k7.5 |
| Conread position: | 1-249 |
| Cow position: | chr21:34222792-34222542 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 60, 34 |
| Conread position: | 1-711 |
| Cow position: | chr21:12658840-12659550 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 629, 625 |
| Conread position: | 1-746 |
| Cow position: | chr21:12608838-12608093 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-747 |
| Cow position: | chr21:12659260-12660006 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 354, 347 |
| Conread position: | 1-795 |
| Cow position: | chr21:12608670-12607876 (view UCSC Genome Browser custom track) |
| Alignm length: | 795 |
| Alignm identity: | 685 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-504 |
| Cow position: | chr21:34223041-34222541 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 140 |
| Conread position: | 7-252 |
| Cow position: | chr21:12659770-12660015 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 34 |
| Conread position: | 7-704 |
| Cow position: | chr21:12608748-12608051 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 29 |
| Conread position: | 7-710 |
| Cow position: | chr21:12659014-12659717 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 40 |
| Conread position: | 8-704 |
| Cow position: | chr21:12659099-12659795 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 325, 338 |
| Conread position: | 8-704 |
| Cow position: | chr21:12659183-12659879 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 40 |
| Conread position: | 15-704 |
| Cow position: | chr21:12658938-12659627 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 29 |
| Conread position: | 15-710 |
| Cow position: | chr21:12608908-12608211 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 676, 669 |
| Conread position: | 47-588 |
| Cow position: | chr21:34223082-34222541 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 294, 300 |
| Conread position: | 75-672 |
| Cow position: | chr21:34223135-34222541 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 24 |
| Conread position: | 75-704 |
| Cow position: | chr21:12658830-12659459 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 92-711 |
| Cow position: | chr21:12608915-12608296 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 362, 367 |
| Conread position: | 133-711 |
| Cow position: | chr21:12658804-12659382 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 326 |
| Conread position: | 182-744 |
| Cow position: | chr21:12608909-12608347 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 165 |
| Conread position: | 225-704 |
| Cow position: | chr21:34223072-34222593 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 122 |
| Conread position: | 227-743 |
| Cow position: | chr21:12658814-12659330 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 68 |
| Conread position: | 330-743 |
| Cow position: | chr21:34223051-34222638 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 266 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 400, 390 |
| Conread position: | 393-743 |
| Cow position: | chr21:34223153-34222806 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 99, 62 |
| Conread position: | 428-743 |
| Cow position: | chr21:12608915-12608600 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.