Cow genome map
Conread name: | Ss1.1-rche27_k7.5 |
Conread position: | 1-284 |
Cow position: | chr23:24560546-24560264 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 188 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 278, 0 |
Conread position: | 1-285 |
Cow position: | chr23:24560462-24560178 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 183 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-408 |
Cow position: | chr23:24626316-24626723 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 261 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 189, 198 |
Conread position: | 1-574 |
Cow position: | chr23:25724035-25723465 (view UCSC Genome Browser custom track) |
Alignm length: | 581 |
Alignm identity: | 344 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 48, 36 |
Conread position: | 1-575 |
Cow position: | chr23:24547238-24546664 (view UCSC Genome Browser custom track) |
Alignm length: | 581 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 36 |
Conread position: | 1-743 |
Cow position: | chr23:24639308-24640050 (view UCSC Genome Browser custom track) |
Alignm length: | 748 |
Alignm identity: | 463 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 92 |
Conread position: | 3-673 |
Cow position: | chr23:24639394-24640064 (view UCSC Genome Browser custom track) |
Alignm length: | 677 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 37 |
Conread position: | 3-743 |
Cow position: | chr23:24560880-24560140 (view UCSC Genome Browser custom track) |
Alignm length: | 742 |
Alignm identity: | 456 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 457, 447 |
Conread position: | 4-270 |
Cow position: | chr23:24639815-24640081 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 168 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 118, 107 |
Conread position: | 4-422 |
Cow position: | chr23:24535866-24535448 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 250 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 187, 194 |
Conread position: | 4-544 |
Cow position: | chr23:24560627-24560088 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 107 |
Conread position: | 4-650 |
Cow position: | chr23:24522804-24522163 (view UCSC Genome Browser custom track) |
Alignm length: | 648 |
Alignm identity: | 373 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 450, 17 |
Conread position: | 4-722 |
Cow position: | chr23:25626209-25626924 (view UCSC Genome Browser custom track) |
Alignm length: | 723 |
Alignm identity: | 434 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 288, 315 |
Conread position: | 7-522 |
Cow position: | chr23:24639566-24640081 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 104 |
Conread position: | 7-574 |
Cow position: | chr23:25660165-25660732 (view UCSC Genome Browser custom track) |
Alignm length: | 571 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 334, 338 |
Conread position: | 7-743 |
Cow position: | chr23:24639230-24639966 (view UCSC Genome Browser custom track) |
Alignm length: | 742 |
Alignm identity: | 453 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 151 |
Conread position: | 9-286 |
Cow position: | chr23:25724111-25723834 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 183 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 9-670 |
Cow position: | chr23:24547314-24546653 (view UCSC Genome Browser custom track) |
Alignm length: | 668 |
Alignm identity: | 422 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 112 |
Conread position: | 14-631 |
Cow position: | chr23:24639489-24640106 (view UCSC Genome Browser custom track) |
Alignm length: | 623 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 19 |
Conread position: | 14-743 |
Cow position: | chr23:25626303-25627029 (view UCSC Genome Browser custom track) |
Alignm length: | 733 |
Alignm identity: | 435 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 87 |
Conread position: | 15-583 |
Cow position: | chr23:24560700-24560132 (view UCSC Genome Browser custom track) |
Alignm length: | 573 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 96 |
Conread position: | 15-707 |
Cow position: | chr23:25626136-25626825 (view UCSC Genome Browser custom track) |
Alignm length: | 698 |
Alignm identity: | 413 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 118, 126 |
Conread position: | 57-626 |
Cow position: | chr23:24535981-24535411 (view UCSC Genome Browser custom track) |
Alignm length: | 573 |
Alignm identity: | 337 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 138, 145 |
Conread position: | 72-672 |
Cow position: | chr23:25660146-25660746 (view UCSC Genome Browser custom track) |
Alignm length: | 601 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 73-491 |
Cow position: | chr23:25724131-25723713 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 250 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 311, 307 |
Conread position: | 73-706 |
Cow position: | chr23:24547334-24546701 (view UCSC Genome Browser custom track) |
Alignm length: | 637 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 260, 274 |
Conread position: | 73-734 |
Cow position: | chr23:25626026-25626684 (view UCSC Genome Browser custom track) |
Alignm length: | 669 |
Alignm identity: | 389 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 45, 35 |
Conread position: | 78-693 |
Cow position: | chr23:24522814-24522204 (view UCSC Genome Browser custom track) |
Alignm length: | 619 |
Alignm identity: | 364 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 59, 30 |
Conread position: | 92-653 |
Cow position: | chr23:25698641-25698080 (view UCSC Genome Browser custom track) |
Alignm length: | 570 |
Alignm identity: | 338 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 228, 242 |
Conread position: | 99-671 |
Cow position: | chr23:24560700-24560128 (view UCSC Genome Browser custom track) |
Alignm length: | 578 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 202, 223 |
Conread position: | 141-733 |
Cow position: | chr23:25698676-25698084 (view UCSC Genome Browser custom track) |
Alignm length: | 601 |
Alignm identity: | 358 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 54, 67 |
Conread position: | 145-703 |
Cow position: | chr23:25660134-25660692 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 178 |
Conread position: | 152-742 |
Cow position: | chr23:24536054-24535464 (view UCSC Genome Browser custom track) |
Alignm length: | 598 |
Alignm identity: | 364 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 61, 69 |
Conread position: | 155-575 |
Cow position: | chr23:24626302-24626722 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 273 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 146, 155 |
Conread position: | 165-712 |
Cow position: | chr23:24522811-24522269 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 321 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 386, 21 |
Conread position: | 177-575 |
Cow position: | chr23:25724111-25723713 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 247 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 375, 380 |
Conread position: | 219-676 |
Cow position: | chr23:24626282-24626739 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 287 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 10, 15 |
Conread position: | 222-743 |
Cow position: | chr23:25660128-25660649 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 320 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 16, 7 |
Conread position: | 254-615 |
Cow position: | chr23:24654042-24654403 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 229 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 321-722 |
Cow position: | chr23:24626302-24626701 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 214, 13 |
Conread position: | 327-703 |
Cow position: | chr23:25626028-25626404 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 240 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 222, 234 |
Conread position: | 327-743 |
Cow position: | chr23:25724129-25723713 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 259 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 345-672 |
Cow position: | chr23:24654049-24654376 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 207 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 360-724 |
Cow position: | chr23:25660182-25660546 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 175, 171 |
Conread position: | 362-743 |
Cow position: | chr23:24547296-24546916 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 248 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 175, 9 |
Conread position: | 362-743 |
Cow position: | chr23:25625979-25626360 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 247 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 92, 100 |
Conread position: | 392-743 |
Cow position: | chr23:24560911-24560560 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 231 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 158, 168 |
Conread position: | 407-747 |
Cow position: | chr23:24626302-24626644 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 225 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 325, 0 |
Conread position: | 413-743 |
Cow position: | chr23:24639216-24639546 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 214 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 43, 50 |
Conread position: | 425-756 |
Cow position: | chr23:24654045-24654375 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 211 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 208, 220 |
Conread position: | 500-743 |
Cow position: | chr23:24654036-24654279 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 158 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 230, 199 |
Conread position: | 507-744 |
Cow position: | chr23:24639226-24639463 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 162 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 129, 139 |
Show alignments to all cow chromosomes.