Cow genome map
| Conread name: | Ss1.1-rche27_k7.5 |
| Conread position: | 1-422 |
| Cow position: | chr25:33127809-33128231 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 265 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 419, 0 |
| Conread position: | 1-517 |
| Cow position: | chr25:34763253-34763764 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 320 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 41, 47 |
| Conread position: | 1-551 |
| Cow position: | chr25:3636555-3636005 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 326 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 45, 40 |
| Conread position: | 1-621 |
| Cow position: | chr25:34769865-34769245 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 34 |
| Conread position: | 1-675 |
| Cow position: | chr25:326588-327268 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 352 |
| Conread position: | 1-698 |
| Cow position: | chr25:33298570-33299267 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 129 |
| Conread position: | 1-704 |
| Cow position: | chr25:33298738-33299441 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 136 |
| Conread position: | 1-705 |
| Cow position: | chr25:33157466-33156763 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 389, 393 |
| Conread position: | 1-711 |
| Cow position: | chr25:34762920-34763624 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 47 |
| Conread position: | 1-712 |
| Cow position: | chr25:33298822-33299533 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 142 |
| Conread position: | 1-722 |
| Cow position: | chr25:34447113-34447826 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 593, 0 |
| Conread position: | 1-733 |
| Cow position: | chr25:36800890-36801610 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 438 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 284, 309 |
| Conread position: | 1-758 |
| Cow position: | chr25:33299158-33299908 (view UCSC Genome Browser custom track) |
| Alignm length: | 759 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 126 |
| Conread position: | 1-764 |
| Cow position: | chr25:326504-327275 (view UCSC Genome Browser custom track) |
| Alignm length: | 774 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 411, 458 |
| Conread position: | 3-411 |
| Cow position: | chr25:34473684-34474090 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 44, 38 |
| Conread position: | 3-648 |
| Cow position: | chr25:24385407-24384762 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 367 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 46, 38 |
| Conread position: | 3-743 |
| Cow position: | chr25:33306453-33305721 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 453 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 149, 108 |
| Conread position: | 4-620 |
| Cow position: | chr25:36800809-36801413 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 372 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 280, 304 |
| Conread position: | 5-698 |
| Cow position: | chr25:36800642-36801335 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 447, 454 |
| Conread position: | 7-283 |
| Cow position: | chr25:4657368-4657092 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 22, 37 |
| Conread position: | 7-506 |
| Cow position: | chr25:25652873-25653373 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 50 |
| Conread position: | 7-547 |
| Cow position: | chr25:34473520-34474057 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 316 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 72, 65 |
| Conread position: | 7-661 |
| Cow position: | chr25:3663944-3664598 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-675 |
| Cow position: | chr25:34447035-34447703 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 560, 567 |
| Conread position: | 7-679 |
| Cow position: | chr25:25652621-25653292 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 35 |
| Conread position: | 7-704 |
| Cow position: | chr25:25652369-25653066 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 191 |
| Conread position: | 7-704 |
| Cow position: | chr25:25652453-25653150 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 436, 425 |
| Conread position: | 7-711 |
| Cow position: | chr25:25652537-25653241 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 28 |
| Conread position: | 7-711 |
| Cow position: | chr25:34770111-34769407 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 543, 549 |
| Conread position: | 7-721 |
| Cow position: | chr25:36801148-36801850 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 416 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 310, 190 |
| Conread position: | 8-421 |
| Cow position: | chr25:4657451-4657038 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-421 |
| Cow position: | chr25:33529028-33529441 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-563 |
| Cow position: | chr25:33530243-33530798 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 335 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 301, 295 |
| Conread position: | 8-704 |
| Cow position: | chr25:34446952-34447648 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 133 |
| Conread position: | 8-743 |
| Cow position: | chr25:34763011-34763740 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 9-620 |
| Cow position: | chr25:25652707-25653318 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 366, 361 |
| Conread position: | 9-667 |
| Cow position: | chr25:33530076-33530734 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 380 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 116, 109 |
| Conread position: | 9-704 |
| Cow position: | chr25:25652203-25652898 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 632, 618 |
| Conread position: | 9-704 |
| Cow position: | chr25:25652287-25652982 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 282 |
| Conread position: | 13-539 |
| Cow position: | chr25:33144868-33145391 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 339 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 14, 34 |
| Conread position: | 14-283 |
| Cow position: | chr25:34733989-34733720 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 33 |
| Conread position: | 14-565 |
| Cow position: | chr25:23420319-23420870 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 331 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 41, 59 |
| Conread position: | 15-296 |
| Cow position: | chr25:22236018-22236299 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 199, 205 |
| Conread position: | 15-337 |
| Cow position: | chr25:33506769-33507091 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 102, 111 |
| Conread position: | 15-659 |
| Cow position: | chr25:33530166-33530810 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 380 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 14, 29 |
| Conread position: | 15-743 |
| Cow position: | chr25:326434-327168 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 23 |
| Conread position: | 16-238 |
| Cow position: | chr25:366831-367053 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-399 |
| Cow position: | chr25:33145036-33145419 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 296, 300 |
| Conread position: | 17-693 |
| Cow position: | chr25:326352-327034 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 156 |
| Conread position: | 43-660 |
| Cow position: | chr25:36801340-36801957 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 357 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 254, 266 |
| Conread position: | 43-704 |
| Cow position: | chr25:33298528-33299189 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 250 |
| Conread position: | 56-495 |
| Cow position: | chr25:3664161-3664600 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 387, 367 |
| Conread position: | 57-400 |
| Cow position: | chr25:3676055-3676398 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 114, 121 |
| Conread position: | 57-501 |
| Cow position: | chr25:22235892-22236336 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 326, 336 |
| Conread position: | 57-660 |
| Cow position: | chr25:34763141-34763741 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 28 |
| Conread position: | 63-693 |
| Cow position: | chr25:33157572-33156942 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 17 |
| Conread position: | 64-648 |
| Cow position: | chr25:24399000-24398420 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 343 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 27, 9 |
| Conread position: | 65-507 |
| Cow position: | chr25:33127789-33128231 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 372, 367 |
| Conread position: | 66-548 |
| Cow position: | chr25:22235817-22236299 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 25, 7 |
| Conread position: | 68-539 |
| Cow position: | chr25:34769714-34769243 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 75 |
| Conread position: | 69-498 |
| Cow position: | chr25:36801534-36801963 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 72-710 |
| Cow position: | chr25:34732614-34731976 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 372 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 305, 297 |
| Conread position: | 74-704 |
| Cow position: | chr25:33530056-33530687 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 358 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 75-667 |
| Cow position: | chr25:33144846-33145435 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 298, 191 |
| Conread position: | 75-693 |
| Cow position: | chr25:33157476-33156858 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 258, 272 |
| Conread position: | 77-706 |
| Cow position: | chr25:34762828-34763454 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 605, 295 |
| Conread position: | 78-412 |
| Cow position: | chr25:33530481-33530815 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 78-709 |
| Cow position: | chr25:25652188-25652819 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 375, 381 |
| Conread position: | 79-703 |
| Cow position: | chr25:3663932-3664556 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 267 |
| Conread position: | 80-484 |
| Cow position: | chr25:4657463-4657059 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 374, 381 |
| Conread position: | 80-658 |
| Cow position: | chr25:34473509-34474084 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 348 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 253, 267 |
| Conread position: | 80-704 |
| Cow position: | chr25:36800633-36801257 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 364 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 253, 265 |
| Conread position: | 81-704 |
| Cow position: | chr25:34770121-34769498 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 45 |
| Conread position: | 98-491 |
| Cow position: | chr25:24399207-24398826 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 256 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 170, 160 |
| Conread position: | 108-658 |
| Cow position: | chr25:23420329-23420879 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 332 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 29, 36 |
| Conread position: | 111-667 |
| Cow position: | chr25:33127667-33128223 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 45 |
| Conread position: | 125-417 |
| Cow position: | chr25:34733962-34733670 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 131-670 |
| Cow position: | chr25:36800516-36801055 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 332 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 322, 332 |
| Conread position: | 139-580 |
| Cow position: | chr25:34732631-34732190 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 276 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 173, 165 |
| Conread position: | 141-698 |
| Cow position: | chr25:34447001-34447558 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 61 |
| Conread position: | 144-721 |
| Cow position: | chr25:33157575-33156998 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 49 |
| Conread position: | 149-626 |
| Cow position: | chr25:22235816-22236293 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 298 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 402, 412 |
| Conread position: | 153-536 |
| Cow position: | chr25:33529089-33529472 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 25, 20 |
| Conread position: | 153-706 |
| Cow position: | chr25:24385341-24384788 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 318 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 240, 228 |
| Conread position: | 157-565 |
| Cow position: | chr25:3675987-3676395 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 131, 139 |
| Conread position: | 157-743 |
| Cow position: | chr25:3663926-3664512 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 157-743 |
| Cow position: | chr25:33144844-33145427 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 559, 193 |
| Conread position: | 164-711 |
| Cow position: | chr25:25652190-25652737 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 165-743 |
| Cow position: | chr25:34770121-34769543 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 148 |
| Conread position: | 167-575 |
| Cow position: | chr25:346453-346861 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 247 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 378, 373 |
| Conread position: | 167-743 |
| Cow position: | chr25:3636557-3635981 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 330 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 168-743 |
| Cow position: | chr25:34762835-34763407 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 226 |
| Conread position: | 183-704 |
| Cow position: | chr25:24398966-24398448 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 305 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 191, 162 |
| Conread position: | 198-626 |
| Cow position: | chr25:414739-414319 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 268 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 19, 28 |
| Conread position: | 198-703 |
| Cow position: | chr25:23420335-23420840 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 315 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 90, 113 |
| Conread position: | 219-703 |
| Cow position: | chr25:34770151-34769667 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 304 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 96, 70 |
| Conread position: | 222-637 |
| Cow position: | chr25:33529074-33529489 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 234-711 |
| Cow position: | chr25:22235817-22236294 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 298 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 54, 58 |
| Conread position: | 239-619 |
| Cow position: | chr25:34732615-34732235 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 62, 78 |
| Conread position: | 246-585 |
| Cow position: | chr25:366725-367064 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 54, 91 |
| Conread position: | 246-651 |
| Cow position: | chr25:346448-346853 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 186, 193 |
| Conread position: | 246-712 |
| Cow position: | chr25:25652188-25652654 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 291 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 384, 380 |
| Conread position: | 250-673 |
| Cow position: | chr25:3636558-3636135 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 265 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 193, 173 |
| Conread position: | 251-704 |
| Cow position: | chr25:34473512-34473962 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 218, 174 |
| Conread position: | 261-611 |
| Cow position: | chr25:33506763-33507113 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 261-658 |
| Cow position: | chr25:4657450-4657053 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 129, 120 |
| Conread position: | 267-722 |
| Cow position: | chr25:23420320-23420775 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 297 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 30, 55 |
| Conread position: | 268-652 |
| Cow position: | chr25:3676014-3676398 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 37, 42 |
| Conread position: | 269-631 |
| Cow position: | chr25:33529037-33529399 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 317-648 |
| Cow position: | chr25:34734023-34733691 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 11, 131 |
| Conread position: | 321-704 |
| Cow position: | chr25:33127793-33128176 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 26 |
| Conread position: | 321-733 |
| Cow position: | chr25:34447013-34447425 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 68, 72 |
| Conread position: | 323-555 |
| Cow position: | chr25:427322-427555 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 132, 140 |
| Conread position: | 325-721 |
| Cow position: | chr25:3675987-3676383 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 245 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 70, 64 |
| Conread position: | 329-658 |
| Cow position: | chr25:366724-367053 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 118, 131 |
| Conread position: | 329-711 |
| Cow position: | chr25:346447-346828 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 244 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 118, 130 |
| Conread position: | 335-713 |
| Cow position: | chr25:34473512-34473886 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 349, 0 |
| Conread position: | 359-703 |
| Cow position: | chr25:24399198-24398866 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 202, 153 |
| Conread position: | 360-704 |
| Cow position: | chr25:414745-414408 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 373-673 |
| Cow position: | chr25:4657422-4657122 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 388-652 |
| Cow position: | chr25:427303-427567 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 392-721 |
| Cow position: | chr25:34447000-34447329 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 393-743 |
| Cow position: | chr25:33298626-33298976 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 60, 73 |
| Conread position: | 393-743 |
| Cow position: | chr25:36800694-36801044 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 97, 89 |
| Conread position: | 394-721 |
| Cow position: | chr25:36800611-36800938 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 59, 69 |
| Conread position: | 407-703 |
| Cow position: | chr25:34732615-34732319 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 407-704 |
| Cow position: | chr25:34734016-34733719 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 61, 40 |
| Conread position: | 408-673 |
| Cow position: | chr25:36844626-36844361 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 82, 75 |
| Conread position: | 411-744 |
| Cow position: | chr25:36801372-36801705 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 270, 264 |
| Conread position: | 414-704 |
| Cow position: | chr25:34732104-34731814 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 164, 181 |
| Conread position: | 414-722 |
| Cow position: | chr25:366725-367033 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 186, 192 |
| Conread position: | 414-743 |
| Cow position: | chr25:346448-346777 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 186, 192 |
| Conread position: | 414-744 |
| Cow position: | chr25:33298479-33298809 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 220, 232 |
| Conread position: | 420-721 |
| Cow position: | chr25:33298569-33298870 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 33, 43 |
| Conread position: | 429-743 |
| Cow position: | chr25:33127733-33128047 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 212, 198 |
| Conread position: | 438-704 |
| Cow position: | chr25:326353-326619 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 148, 159 |
| Conread position: | 438-720 |
| Cow position: | chr25:4657441-4657157 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 268, 0 |
| Conread position: | 454-743 |
| Cow position: | chr25:23266982-23266693 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 237, 194 |
| Conread position: | 477-711 |
| Cow position: | chr25:427308-427542 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 484-744 |
| Cow position: | chr25:33127705-33127964 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 7 |
| Conread position: | 485-743 |
| Cow position: | chr25:22235816-22236074 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 25, 8 |
| Conread position: | 488-711 |
| Cow position: | chr25:414782-414567 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 64, 22 |
| Conread position: | 497-746 |
| Cow position: | chr25:34762828-34763077 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 144, 131 |
Show alignments to all cow chromosomes.