Cow genome map
| Conread name: | Ss1.1-rche27_k7.5 |
| Conread position: | 1-621 |
| Cow position: | chr6:49340831-49341450 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 378 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 48, 38 |
| Conread position: | 4-711 |
| Cow position: | chr6:49340498-49341205 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-711 |
| Cow position: | chr6:49340415-49341121 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 625, 621 |
| Conread position: | 6-703 |
| Cow position: | chr6:49340668-49341364 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 35 |
| Conread position: | 7-575 |
| Cow position: | chr6:49396390-49396958 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 346 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 126, 131 |
| Conread position: | 7-582 |
| Cow position: | chr6:49428913-49429488 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 28 |
| Conread position: | 7-733 |
| Cow position: | chr6:49428493-49429219 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 131 |
| Conread position: | 7-733 |
| Cow position: | chr6:49428745-49429471 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 41 |
| Conread position: | 8-676 |
| Cow position: | chr6:49428578-49429246 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 28 |
| Conread position: | 8-704 |
| Cow position: | chr6:49428242-49428938 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 532, 537 |
| Conread position: | 8-710 |
| Cow position: | chr6:49428326-49429028 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 83 |
| Conread position: | 15-722 |
| Cow position: | chr6:49428837-49429542 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 297, 319 |
| Conread position: | 17-735 |
| Cow position: | chr6:49396232-49396950 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 543, 524 |
| Conread position: | 18-530 |
| Cow position: | chr6:49396485-49396997 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 305 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 40, 33 |
| Conread position: | 18-676 |
| Cow position: | chr6:49428420-49429078 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 353, 359 |
| Conread position: | 55-742 |
| Cow position: | chr6:49340633-49341320 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 81 |
| Conread position: | 57-684 |
| Cow position: | chr6:49340803-49341430 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 83 |
| Conread position: | 64-743 |
| Cow position: | chr6:49340390-49341069 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 187 |
| Conread position: | 68-711 |
| Cow position: | chr6:49428217-49428861 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 563 |
| Conread position: | 102-733 |
| Cow position: | chr6:49396155-49396780 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 387 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 31, 38 |
| Conread position: | 146-743 |
| Cow position: | chr6:49340388-49340985 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 335, 298 |
| Conread position: | 310-693 |
| Cow position: | chr6:49340384-49340767 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 250 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 23, 37 |
| Conread position: | 454-711 |
| Cow position: | chr6:49340360-49340617 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 176, 172 |
Show alignments to all cow chromosomes.