Cow genome map


           Conread name:
           Ss1.1-rcki014_i4.5
        

               Conread position:
               1-181
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               97, 46
               

               Conread position:
               1-236
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               106, 19
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 33
               

               Conread position:
               1-343
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 20
               

               Conread position:
               1-344
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 33
               

               Conread position:
               1-346
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               246
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               18, 35
               

               Conread position:
               1-346
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               1-347
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 36
               

               Conread position:
               1-371
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 28
               

               Conread position:
               3-250
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               10, 218
               

               Conread position:
               3-346
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               243
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               27, 69
               

               Conread position:
               8-231
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               176
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               27, 92
               

               Conread position:
               8-328
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 149
               

               Conread position:
               12-231
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               15, 28
               

               Conread position:
               12-310
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               28-344
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               31-381
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 13
               

               Conread position:
               40-209
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               40-214
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               53, 79
               

               Conread position:
               40-226
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               51, 175
               

               Conread position:
               43-328
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 106
               

               Conread position:
               43-356
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 207
               

               Conread position:
               44-164
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               44-208
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               55, 21
               

               Conread position:
               44-209
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               55, 117
               

               Conread position:
               45-240
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               64, 9
               

               Conread position:
               46-186
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               47-208
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               47-208
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               59, 76
               

               Conread position:
               47-209
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               51-218
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               48, 18
               

               Conread position:
               59-208
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               34, 83
               

               Conread position:
               93-210
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               68, 106
               

               Conread position:
               103-346
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               189
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               113-324
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               14, 21
               

               Conread position:
               143-375
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               37, 126
               

               Conread position:
               144-377
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               43, 241
               

               Conread position:
               144-379
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               90, 32
               

               Conread position:
               146-379
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               184
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               148-379
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               10, 211
               

               Conread position:
               158-288
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               75, 18
               

               Conread position:
               158-335
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               75, 21
               

               Conread position:
               158-369
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               24, 45
               

               Conread position:
               158-370
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               29, 77
               

               Conread position:
               158-375
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               158-375
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               26, 223
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               23, 45
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               29, 205
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               75, 24
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               75, 10
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               184
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               25, 132
               

               Conread position:
               159-379
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               74, 17
               

               Conread position:
               159-379
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               74, 121
               

               Conread position:
               159-384
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               186
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               28, 206
               

               Conread position:
               160-372
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               160-377
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               74, 202
               

               Conread position:
               160-377
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               27, 157
               

               Conread position:
               167-379
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               67, 11
               

               Conread position:
               175-378
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               6, 196
               

               Conread position:
               178-379
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               56, 188
               

               Conread position:
               178-379
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               55, 186
               

               Conread position:
               180-377
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               184-377
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               49, 53
               

               Conread position:
               184-379
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               192-379
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               194-379
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               39, 185
               

               Conread position:
               201-379
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               32, 69
               

               Conread position:
               205-374
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               208-379
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               25, 43
               

               Conread position:
               216-347
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               216-379
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               232-346
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               232-377
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               53, 98
               
Show alignments to all cow chromosomes.