Cow genome map


           Conread name:
           Ss1.1-rcki014_i4.5
        

               Conread position:
               1-323
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 65
               

               Conread position:
               1-346
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 41
               

               Conread position:
               1-346
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               268
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               92, 34
               

               Conread position:
               1-346
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 211
               

               Conread position:
               1-346
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 180
               

               Conread position:
               1-378
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 18
               

               Conread position:
               3-345
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               3-345
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 38
               

               Conread position:
               10-348
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 25
               

               Conread position:
               20-334
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               249
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               78, 15
               

               Conread position:
               24-347
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 11
               

               Conread position:
               33-193
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               66, 88
               

               Conread position:
               35-331
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 32
               

               Conread position:
               44-210
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               49, 113
               

               Conread position:
               44-210
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               49, 107
               

               Conread position:
               44-213
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               57, 49
               

               Conread position:
               44-226
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               67, 129
               

               Conread position:
               44-288
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 65
               

               Conread position:
               45-346
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 132
               

               Conread position:
               46-206
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               136, 12
               

               Conread position:
               46-210
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               53, 12
               

               Conread position:
               46-232
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               136, 63
               

               Conread position:
               47-173
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               47-209
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               47-209
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               52, 37
               

               Conread position:
               47-210
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               61, 11
               

               Conread position:
               47-216
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               52, 71
               

               Conread position:
               47-238
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               60, 79
               

               Conread position:
               47-377
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 216
               

               Conread position:
               61-239
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               48, 112
               

               Conread position:
               80-226
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               30, 134
               

               Conread position:
               141-344
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               173
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               46, 69
               

               Conread position:
               144-377
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               89, 38
               

               Conread position:
               146-345
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               44, 30
               

               Conread position:
               146-352
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               146-379
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               87, 32
               

               Conread position:
               156-379
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               183
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               78, 20
               

               Conread position:
               158-309
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               158-311
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               24, 142
               

               Conread position:
               158-375
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               25, 45
               

               Conread position:
               158-375
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               180
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               158-376
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 199
               

               Conread position:
               158-376
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               177
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               29, 54
               

               Conread position:
               158-377
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               24, 18
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               76, 12
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               75, 18
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               75, 18
               

               Conread position:
               159-379
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               28, 210
               

               Conread position:
               160-377
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               22, 123
               

               Conread position:
               160-377
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               180
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               160-378
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               160-379
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               160-379
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               162-377
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               173
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               24, 118
               

               Conread position:
               169-379
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               14, 195
               

               Conread position:
               187-362
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               188-379
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               45, 108
               

               Conread position:
               188-379
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               45, 176
               

               Conread position:
               225-379
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               8, 135
               

               Conread position:
               226-346
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               61, 0
               
Show alignments to all cow chromosomes.