Cow genome map


           Conread name:
           Ss1.1-rcki014_i4.5
        

               Conread position:
               1-319
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 264
               

               Conread position:
               1-346
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 42
               

               Conread position:
               1-346
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 34
               

               Conread position:
               1-379
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 30
               

               Conread position:
               8-242
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               101, 22
               

               Conread position:
               8-346
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 27
               

               Conread position:
               36-346
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               63, 205
               

               Conread position:
               46-157
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               46-232
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               47, 105
               

               Conread position:
               47-176
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               47-209
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               52, 116
               

               Conread position:
               47-209
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               52, 76
               

               Conread position:
               47-226
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               113, 39
               

               Conread position:
               48-232
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               132, 41
               

               Conread position:
               48-374
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 120
               

               Conread position:
               53-240
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               53, 104
               

               Conread position:
               81-346
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 11
               

               Conread position:
               82-303
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               19, 138
               

               Conread position:
               92-358
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 17
               

               Conread position:
               105-328
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               73, 110
               

               Conread position:
               120-344
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               60, 8
               

               Conread position:
               142-379
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               45, 118
               

               Conread position:
               146-376
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               146-377
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               179
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               146-379
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               186
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               37, 30
               

               Conread position:
               146-379
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               88, 30
               

               Conread position:
               154-361
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               36, 22
               

               Conread position:
               154-376
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               185
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               28, 47
               

               Conread position:
               158-273
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               158-368
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               172
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               158-375
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               170
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               75, 145
               

               Conread position:
               158-376
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               15, 65
               

               Conread position:
               158-377
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               185
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               29, 204
               

               Conread position:
               158-377
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               158-377
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               25, 87
               

               Conread position:
               158-377
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               24, 10
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               29, 10
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               26, 209
               

               Conread position:
               158-383
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               29, 12
               

               Conread position:
               159-352
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               159-379
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               165-297
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               178-379
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               39, 15
               

               Conread position:
               178-379
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               112, 53
               

               Conread position:
               178-379
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               55, 91
               

               Conread position:
               191-334
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               203-377
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               30, 47
               

               Conread position:
               213-379
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               17, 42
               

               Conread position:
               233-376
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               57, 0
               
Show alignments to all cow chromosomes.