Cow genome map
Conread name: | Ss1.1-rcki014_i4.5 |
Conread position: | 1-185 |
Cow position: | chr15:3727481-3727667 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 144 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 47, 11 |
Conread position: | 1-330 |
Cow position: | chr15:15214040-15214371 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 146 |
Conread position: | 1-346 |
Cow position: | chr15:26127700-26127338 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 20 |
Conread position: | 1-346 |
Cow position: | chr15:39500037-39499672 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 93 |
Conread position: | 3-346 |
Cow position: | chr15:37364843-37365194 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 12 |
Conread position: | 4-346 |
Cow position: | chr15:45618466-45618131 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 31 |
Conread position: | 43-318 |
Cow position: | chr15:27867795-27867521 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 206 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 108, 36 |
Conread position: | 44-209 |
Cow position: | chr15:11620838-11620660 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 131 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 44-209 |
Cow position: | chr15:44219406-44219229 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 135 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 38, 165 |
Conread position: | 45-235 |
Cow position: | chr15:10314031-10314223 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 149 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 50, 102 |
Conread position: | 45-376 |
Cow position: | chr15:45237066-45237414 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 47-345 |
Cow position: | chr15:12863894-12864197 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 183, 218 |
Conread position: | 74-379 |
Cow position: | chr15:43561012-43561328 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 98-207 |
Cow position: | chr15:11809564-11809455 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 88 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 100-251 |
Cow position: | chr15:36525124-36524972 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 113 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 65, 111 |
Conread position: | 103-334 |
Cow position: | chr15:27126581-27126798 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 172 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 85, 22 |
Conread position: | 103-346 |
Cow position: | chr15:8453485-8453235 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 196 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 87, 35 |
Conread position: | 144-379 |
Cow position: | chr15:45376324-45376558 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 176 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 89, 32 |
Conread position: | 146-278 |
Cow position: | chr15:9681333-9681468 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 106 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 146-377 |
Cow position: | chr15:15753099-15752855 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 146-379 |
Cow position: | chr15:38381503-38381744 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 181 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 87, 22 |
Conread position: | 146-381 |
Cow position: | chr15:16387564-16387806 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 185 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 87, 22 |
Conread position: | 157-379 |
Cow position: | chr15:51868871-51868635 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 165 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 26, 19 |
Conread position: | 157-380 |
Cow position: | chr15:45040793-45040556 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 186 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 30, 232 |
Conread position: | 158-279 |
Cow position: | chr15:3702527-3702650 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 102 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 158-335 |
Cow position: | chr15:51036477-51036661 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 144 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 75, 18 |
Conread position: | 158-372 |
Cow position: | chr15:35631146-35631366 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 166 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 75, 18 |
Conread position: | 158-376 |
Cow position: | chr15:42590913-42590682 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 173 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 75, 116 |
Conread position: | 158-377 |
Cow position: | chr15:35061085-35060863 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 180 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 75, 9 |
Conread position: | 158-379 |
Cow position: | chr15:13502370-13502598 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 182 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 75, 54 |
Conread position: | 158-379 |
Cow position: | chr15:16207326-16207553 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 177 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 75, 18 |
Conread position: | 158-379 |
Cow position: | chr15:18698129-18698358 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 158 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 122, 70 |
Conread position: | 160-379 |
Cow position: | chr15:18692415-18692182 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 178 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 167-379 |
Cow position: | chr15:52447025-52447248 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 171 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 13, 139 |
Conread position: | 178-381 |
Cow position: | chr15:52870713-52870923 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 156 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 55, 79 |
Conread position: | 184-345 |
Cow position: | chr15:33298895-33298724 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 131 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 184-377 |
Cow position: | chr15:16598673-16598484 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 160 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 88 |
Conread position: | 240-346 |
Cow position: | chr15:10314567-10314680 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 95 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 41, 100 |
Conread position: | 241-377 |
Cow position: | chr15:25490782-25490928 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 112 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 43, 0 |
Show alignments to all cow chromosomes.