Cow genome map

Conread name: Ss1.1-rcki014_i4.5

Conread position: 1-185
Cow position: chr15:3727481-3727667 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 47, 11

Conread position: 1-330
Cow position: chr15:15214040-15214371 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 146

Conread position: 1-346
Cow position: chr15:26127700-26127338 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 20

Conread position: 1-346
Cow position: chr15:39500037-39499672 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 93

Conread position: 3-346
Cow position: chr15:37364843-37365194 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 12

Conread position: 4-346
Cow position: chr15:45618466-45618131 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 31

Conread position: 43-318
Cow position: chr15:27867795-27867521 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 206
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 108, 36

Conread position: 44-209
Cow position: chr15:11620838-11620660 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 44-209
Cow position: chr15:44219406-44219229 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 38, 165

Conread position: 45-235
Cow position: chr15:10314031-10314223 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 50, 102

Conread position: 45-376
Cow position: chr15:45237066-45237414 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 47-345
Cow position: chr15:12863894-12864197 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 218

Conread position: 74-379
Cow position: chr15:43561012-43561328 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 98-207
Cow position: chr15:11809564-11809455 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 100-251
Cow position: chr15:36525124-36524972 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 65, 111

Conread position: 103-334
Cow position: chr15:27126581-27126798 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 85, 22

Conread position: 103-346
Cow position: chr15:8453485-8453235 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 196
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 87, 35

Conread position: 144-379
Cow position: chr15:45376324-45376558 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 89, 32

Conread position: 146-278
Cow position: chr15:9681333-9681468 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 146-377
Cow position: chr15:15753099-15752855 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 146-379
Cow position: chr15:38381503-38381744 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 87, 22

Conread position: 146-381
Cow position: chr15:16387564-16387806 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 185
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 87, 22

Conread position: 157-379
Cow position: chr15:51868871-51868635 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 19

Conread position: 157-380
Cow position: chr15:45040793-45040556 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 186
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 30, 232

Conread position: 158-279
Cow position: chr15:3702527-3702650 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 158-335
Cow position: chr15:51036477-51036661 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 75, 18

Conread position: 158-372
Cow position: chr15:35631146-35631366 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 75, 18

Conread position: 158-376
Cow position: chr15:42590913-42590682 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 173
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 75, 116

Conread position: 158-377
Cow position: chr15:35061085-35060863 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 180
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 75, 9

Conread position: 158-379
Cow position: chr15:13502370-13502598 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 182
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 75, 54

Conread position: 158-379
Cow position: chr15:16207326-16207553 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 177
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 75, 18

Conread position: 158-379
Cow position: chr15:18698129-18698358 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 122, 70

Conread position: 160-379
Cow position: chr15:18692415-18692182 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 178
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 27, 0

Conread position: 167-379
Cow position: chr15:52447025-52447248 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 13, 139

Conread position: 178-381
Cow position: chr15:52870713-52870923 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 55, 79

Conread position: 184-345
Cow position: chr15:33298895-33298724 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 184-377
Cow position: chr15:16598673-16598484 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 160
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 88

Conread position: 240-346
Cow position: chr15:10314567-10314680 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 41, 100

Conread position: 241-377
Cow position: chr15:25490782-25490928 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 0

Show alignments to all cow chromosomes.