Cow genome map


           Conread name:
           Ss1.1-rcki014_i4.5
        

               Conread position:
               1-189
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               92, 33
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 126
               

               Conread position:
               1-346
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 118
               

               Conread position:
               1-346
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 186
               

               Conread position:
               1-346
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               262
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               22, 77
               

               Conread position:
               4-346
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               262
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               89, 31
               

               Conread position:
               8-332
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 80
               

               Conread position:
               8-347
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 35
               

               Conread position:
               23-346
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 198
               

               Conread position:
               37-231
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               62, 178
               

               Conread position:
               44-157
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               55, 77
               

               Conread position:
               44-376
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 21
               

               Conread position:
               45-308
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 17
               

               Conread position:
               46-209
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               46-379
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 90
               

               Conread position:
               47-209
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               47-226
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               111, 68
               

               Conread position:
               47-226
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               52, 95
               

               Conread position:
               47-317
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               27, 111
               

               Conread position:
               47-377
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               47-379
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               55-269
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               43, 97
               

               Conread position:
               73-359
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 93
               

               Conread position:
               103-353
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               78, 7
               

               Conread position:
               104-346
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               78, 110
               

               Conread position:
               105-346
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               146-367
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               146-378
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               87, 30
               

               Conread position:
               147-379
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               186
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               62, 29
               

               Conread position:
               154-377
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               33, 196
               

               Conread position:
               158-307
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               158-367
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               25, 15
               

               Conread position:
               158-370
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               29, 209
               

               Conread position:
               158-377
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               158-378
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               75, 21
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               29, 204
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               26, 187
               

               Conread position:
               158-383
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               159-376
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               184
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               159-379
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               23, 17
               

               Conread position:
               160-374
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               73, 19
               

               Conread position:
               160-376
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               160-377
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               73, 42
               

               Conread position:
               160-377
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               22, 206
               

               Conread position:
               160-379
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               27, 205
               

               Conread position:
               161-379
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               162-379
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               25, 14
               

               Conread position:
               162-379
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               71, 99
               

               Conread position:
               175-379
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               178-346
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               40, 31
               

               Conread position:
               178-379
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               55, 66
               

               Conread position:
               204-309
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               93
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               233-347
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               233-379
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               57, 129
               
Show alignments to all cow chromosomes.