Cow genome map

Conread name: Ss1.1-rcki014_i4.5

Conread position: 1-268
Cow position: chr18:38329886-38329617 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 73

Conread position: 1-308
Cow position: chr18:10050860-10051182 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 34

Conread position: 1-376
Cow position: chr18:2783078-2783481 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 278
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 29, 38

Conread position: 2-286
Cow position: chr18:23430979-23431258 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 108

Conread position: 3-265
Cow position: chr18:49899072-49899333 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 25

Conread position: 8-346
Cow position: chr18:46864105-46864444 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 26

Conread position: 12-347
Cow position: chr18:1387545-1387207 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 248
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 90, 23

Conread position: 44-194
Cow position: chr18:51786019-51786171 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 49, 113

Conread position: 46-209
Cow position: chr18:21549076-21549248 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 112, 0

Conread position: 46-376
Cow position: chr18:11234716-11234380 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 64

Conread position: 47-292
Cow position: chr18:35508229-35508470 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 69

Conread position: 48-194
Cow position: chr18:5770876-5770717 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 49-209
Cow position: chr18:44505164-44505335 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 50, 72

Conread position: 52-333
Cow position: chr18:43820760-43820471 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 212
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 41, 176

Conread position: 75-358
Cow position: chr18:42288570-42288874 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 139

Conread position: 89-346
Cow position: chr18:4503759-4504032 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 122

Conread position: 120-376
Cow position: chr18:47274900-47275162 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 201
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 67, 21

Conread position: 146-379
Cow position: chr18:39547632-39547392 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 189
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 87, 22

Conread position: 146-379
Cow position: chr18:45118713-45118958 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 183
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 44, 37

Conread position: 146-379
Cow position: chr18:56036844-56037092 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 37, 0

Conread position: 157-379
Cow position: chr18:48219254-48219027 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 180
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 25, 210

Conread position: 158-376
Cow position: chr18:32048024-32048258 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 185
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 29, 0

Conread position: 158-378
Cow position: chr18:22652391-22652629 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 176-361
Cow position: chr18:49048341-49048537 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 151
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 57, 0

Conread position: 178-379
Cow position: chr18:37738242-37738454 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 55, 154

Conread position: 189-379
Cow position: chr18:45109691-45109892 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 161
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 44, 174

Conread position: 206-355
Cow position: chr18:39080779-39080622 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 131
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 28, 154

Conread position: 224-379
Cow position: chr18:49898172-49898334 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 49, 9

Conread position: 229-378
Cow position: chr18:49081059-49080900 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 57, 133

Show alignments to all cow chromosomes.