Cow genome map
| Conread name: | Ss1.1-rcki014_i4.5 |
| Conread position: | 1-346 |
| Cow position: | chr20:34958518-34958874 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 34 |
| Conread position: | 1-347 |
| Cow position: | chr20:19466473-19466810 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 34 |
| Conread position: | 8-274 |
| Cow position: | chr20:37345825-37345553 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 28 |
| Conread position: | 17-275 |
| Cow position: | chr20:39441235-39440980 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 192 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 169, 116 |
| Conread position: | 40-240 |
| Cow position: | chr20:22402022-22402226 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 138 |
| Conread position: | 46-345 |
| Cow position: | chr20:35704740-35705051 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 23 |
| Conread position: | 47-324 |
| Cow position: | chr20:17306479-17306769 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 216 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 51, 119 |
| Conread position: | 146-379 |
| Cow position: | chr20:17918906-17918662 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 87, 109 |
| Conread position: | 146-379 |
| Cow position: | chr20:22034794-22035037 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 87, 32 |
| Conread position: | 146-379 |
| Cow position: | chr20:29588406-29588167 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 37, 30 |
| Conread position: | 157-328 |
| Cow position: | chr20:41972175-41972356 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 157-379 |
| Cow position: | chr20:34317477-34317264 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 76, 29 |
| Conread position: | 158-278 |
| Cow position: | chr20:3609557-3609437 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 38 |
| Conread position: | 158-369 |
| Cow position: | chr20:40225375-40225167 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 34, 77 |
| Conread position: | 158-377 |
| Cow position: | chr20:30962325-30962093 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 158-379 |
| Cow position: | chr20:12546197-12546419 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 30, 115 |
| Conread position: | 158-379 |
| Cow position: | chr20:26398748-26398974 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 75, 18 |
| Conread position: | 159-379 |
| Cow position: | chr20:33895181-33895410 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 17 |
| Conread position: | 160-348 |
| Cow position: | chr20:33201922-33202124 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 160-383 |
| Cow position: | chr20:31189514-31189288 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 178 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 13, 135 |
| Conread position: | 162-359 |
| Cow position: | chr20:35609942-35610149 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 167 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 165-375 |
| Cow position: | chr20:5897127-5896903 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 184-378 |
| Cow position: | chr20:40157468-40157264 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 49, 178 |
| Conread position: | 188-288 |
| Cow position: | chr20:34296328-34296429 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 199-378 |
| Cow position: | chr20:6905735-6905545 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 34, 164 |
Show alignments to all cow chromosomes.