Cow genome map


           Conread name:
           Ss1.1-rcki014_i4.5
        

               Conread position:
               1-346
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 34
               

               Conread position:
               1-347
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 34
               

               Conread position:
               8-274
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 28
               

               Conread position:
               17-275
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               192
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               169, 116
               

               Conread position:
               40-240
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 138
               

               Conread position:
               46-345
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 23
               

               Conread position:
               47-324
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               216
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               51, 119
               

               Conread position:
               146-379
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               87, 109
               

               Conread position:
               146-379
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               87, 32
               

               Conread position:
               146-379
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               37, 30
               

               Conread position:
               157-328
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               157-379
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               76, 29
               

               Conread position:
               158-278
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 38
               

               Conread position:
               158-369
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               34, 77
               

               Conread position:
               158-377
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               30, 115
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               75, 18
               

               Conread position:
               159-379
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 17
               

               Conread position:
               160-348
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               160-383
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               178
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               13, 135
               

               Conread position:
               162-359
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               167
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               165-375
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               175
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               184-378
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               49, 178
               

               Conread position:
               188-288
               

               Cow position:
               
               

               Alignm length:
               102
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               199-378
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               34, 164
               
Show alignments to all cow chromosomes.