Cow genome map
| Conread name: | Ss1.1-rcki014_i4.5 |
| Conread position: | 1-345 |
| Cow position: | chr22:10467835-10468193 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 34 |
| Conread position: | 2-309 |
| Cow position: | chr22:43969337-43969647 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 14 |
| Conread position: | 3-269 |
| Cow position: | chr22:5350823-5350546 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 10, 34 |
| Conread position: | 3-309 |
| Cow position: | chr22:6193589-6193274 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 30 |
| Conread position: | 42-269 |
| Cow position: | chr22:4617527-4617288 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 51, 178 |
| Conread position: | 43-379 |
| Cow position: | chr22:5459602-5459269 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 53 |
| Conread position: | 44-206 |
| Cow position: | chr22:5653753-5653593 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 129, 49 |
| Conread position: | 45-228 |
| Cow position: | chr22:45605112-45604925 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 151 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 46-206 |
| Cow position: | chr22:26040253-26040093 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 134, 90 |
| Conread position: | 47-201 |
| Cow position: | chr22:28532636-28532794 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 100-346 |
| Cow position: | chr22:6555282-6555540 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 133 |
| Conread position: | 143-361 |
| Cow position: | chr22:24773539-24773770 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 143-382 |
| Cow position: | chr22:26429749-26429497 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 38, 250 |
| Conread position: | 146-377 |
| Cow position: | chr22:956321-956561 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 146-378 |
| Cow position: | chr22:10695113-10695349 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 87, 30 |
| Conread position: | 154-375 |
| Cow position: | chr22:26040097-26039865 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 185 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 79, 15 |
| Conread position: | 158-358 |
| Cow position: | chr22:27429505-27429296 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 25, 103 |
| Conread position: | 158-377 |
| Cow position: | chr22:1916038-1916258 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 28, 103 |
| Conread position: | 158-379 |
| Cow position: | chr22:3242157-3241927 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 75, 32 |
| Conread position: | 158-379 |
| Cow position: | chr22:19568585-19568352 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 158-379 |
| Cow position: | chr22:21015059-21015291 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 180 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 158-379 |
| Cow position: | chr22:23235089-23235313 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 75, 18 |
| Conread position: | 158-382 |
| Cow position: | chr22:11166019-11165785 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 29, 65 |
| Conread position: | 160-379 |
| Cow position: | chr22:11169458-11169234 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 23, 197 |
| Conread position: | 160-379 |
| Cow position: | chr22:14796592-14796824 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 226 |
| Conread position: | 161-377 |
| Cow position: | chr22:4013094-4012879 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 69 |
| Conread position: | 164-334 |
| Cow position: | chr22:4016917-4016736 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 164-379 |
| Cow position: | chr22:21977513-21977314 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 23, 37 |
| Conread position: | 191-379 |
| Cow position: | chr22:40886249-40886441 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 42, 5 |
| Conread position: | 200-376 |
| Cow position: | chr22:28532817-28533006 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 33, 68 |
Show alignments to all cow chromosomes.