Cow genome map


           Conread name:
           Ss1.1-rcki014_i4.5
        

               Conread position:
               1-345
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 34
               

               Conread position:
               2-309
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 14
               

               Conread position:
               3-269
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               10, 34
               

               Conread position:
               3-309
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 30
               

               Conread position:
               42-269
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               51, 178
               

               Conread position:
               43-379
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 53
               

               Conread position:
               44-206
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               129, 49
               

               Conread position:
               45-228
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               151
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               46-206
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               134, 90
               

               Conread position:
               47-201
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               100-346
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 133
               

               Conread position:
               143-361
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               143-382
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               38, 250
               

               Conread position:
               146-377
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               146-378
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               87, 30
               

               Conread position:
               154-375
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               185
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               79, 15
               

               Conread position:
               158-358
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               25, 103
               

               Conread position:
               158-377
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               28, 103
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               75, 32
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               180
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               75, 18
               

               Conread position:
               158-382
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               29, 65
               

               Conread position:
               160-379
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               23, 197
               

               Conread position:
               160-379
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 226
               

               Conread position:
               161-377
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 69
               

               Conread position:
               164-334
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               164-379
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               23, 37
               

               Conread position:
               191-379
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               42, 5
               

               Conread position:
               200-376
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               33, 68
               
Show alignments to all cow chromosomes.