Cow genome map


           Conread name:
           Ss1.1-rcki014_i4.5
        

               Conread position:
               1-347
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 34
               

               Conread position:
               1-347
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 34
               

               Conread position:
               3-309
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               94, 57
               

               Conread position:
               17-346
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 180
               

               Conread position:
               24-346
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               247
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               47, 18
               

               Conread position:
               44-208
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               114, 48
               

               Conread position:
               44-240
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               139, 67
               

               Conread position:
               46-209
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               53, 75
               

               Conread position:
               47-150
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               89
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               47-209
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               137, 49
               

               Conread position:
               47-209
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               49-209
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               110-346
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               70, 122
               

               Conread position:
               111-288
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               77, 95
               

               Conread position:
               140-380
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               146-346
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               146-376
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               155-379
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               78, 15
               

               Conread position:
               155-382
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               78, 15
               

               Conread position:
               157-346
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               76, 35
               

               Conread position:
               157-378
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               24, 19
               

               Conread position:
               158-358
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               76, 203
               

               Conread position:
               158-376
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               177
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               158-377
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               30, 52
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               72, 206
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               159-379
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               74, 20
               

               Conread position:
               159-379
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               74, 23
               

               Conread position:
               160-371
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               30, 10
               

               Conread position:
               160-376
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               27, 202
               

               Conread position:
               160-376
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               73, 40
               

               Conread position:
               161-375
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               161-379
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               175
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               5, 199
               

               Conread position:
               162-379
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               21, 84
               

               Conread position:
               167-371
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               66, 24
               

               Conread position:
               167-379
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               20, 184
               

               Conread position:
               167-380
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               66, 11
               

               Conread position:
               178-301
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               178-379
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               55, 194
               

               Conread position:
               199-375
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               229-376
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               61, 33
               
Show alignments to all cow chromosomes.