Cow genome map


           Conread name:
           Ss1.1-rcki014_i4.5
        

               Conread position:
               1-345
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 210
               

               Conread position:
               1-379
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 22
               

               Conread position:
               2-346
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 211
               

               Conread position:
               3-157
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 32
               

               Conread position:
               3-376
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 16
               

               Conread position:
               5-263
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               16, 30
               

               Conread position:
               18-346
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               250
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               18, 136
               

               Conread position:
               23-288
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 24
               

               Conread position:
               36-379
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 91
               

               Conread position:
               44-198
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               55, 77
               

               Conread position:
               44-205
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               44-214
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               44-218
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               141, 49
               

               Conread position:
               44-379
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 112
               

               Conread position:
               45-309
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 146
               

               Conread position:
               46-214
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               53, 75
               

               Conread position:
               47-160
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               59, 74
               

               Conread position:
               47-204
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               47-206
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               47-209
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               47-240
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               54, 46
               

               Conread position:
               47-277
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               48, 166
               

               Conread position:
               47-347
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 96
               

               Conread position:
               47-379
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 164
               

               Conread position:
               51-345
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               111-324
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               31, 99
               

               Conread position:
               146-372
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               146-375
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               42, 100
               

               Conread position:
               146-379
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               87, 36
               

               Conread position:
               157-379
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               185
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               31, 89
               

               Conread position:
               158-307
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               158-352
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               75, 18
               

               Conread position:
               158-371
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               75, 24
               

               Conread position:
               158-376
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               158-377
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               24, 105
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               75, 18
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               75, 122
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               31, 18
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               34, 10
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               34, 10
               

               Conread position:
               158-380
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               75, 108
               

               Conread position:
               160-273
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               160-377
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               21, 118
               

               Conread position:
               167-345
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               14, 9
               

               Conread position:
               176-379
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               57, 117
               

               Conread position:
               178-379
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               55, 187
               

               Conread position:
               184-374
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               49, 182
               

               Conread position:
               184-379
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               50, 134
               

               Conread position:
               184-379
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               49, 151
               

               Conread position:
               187-379
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               188-379
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               159
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               45, 56
               

               Conread position:
               195-379
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               38, 133
               

               Conread position:
               236-376
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               52, 0
               
Show alignments to all cow chromosomes.