Cow genome map

Conread name: Ss1.1-rcki014_i4.5

Conread position: 1-346
Cow position:
Alignm length: 361
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 36

Conread position: 1-346
Cow position:
Alignm length: 364
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 20

Conread position: 1-346
Cow position:
Alignm length: 363
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 33

Conread position: 1-377
Cow position:
Alignm length: 397
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 22

Conread position: 41-359
Cow position:
Alignm length: 331
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 85

Conread position: 44-209
Cow position:
Alignm length: 170
Alignm identity: 132
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 55, 0

Conread position: 44-209
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 55, 40

Conread position: 44-334
Cow position:
Alignm length: 307
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 21

Conread position: 44-376
Cow position:
Alignm length: 360
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 49

Conread position: 45-210
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 58, 0

Conread position: 46-206
Cow position:
Alignm length: 164
Alignm identity: 130
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 52, 96

Conread position: 46-209
Cow position:
Alignm length: 167
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 46-376
Cow position:
Alignm length: 345
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 213

Conread position: 46-376
Cow position:
Alignm length: 344
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 140

Conread position: 47-209
Cow position:
Alignm length: 169
Alignm identity: 132
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 52, 109

Conread position: 50-375
Cow position:
Alignm length: 343
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 50-377
Cow position:
Alignm length: 338
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 98

Conread position: 51-244
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 170

Conread position: 67-209
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 34, 26

Conread position: 123-379
Cow position:
Alignm length: 270
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 146-379
Cow position:
Alignm length: 246
Alignm identity: 180
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 87, 32

Conread position: 146-379
Cow position:
Alignm length: 240
Alignm identity: 179
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 37, 160

Conread position: 158-376
Cow position:
Alignm length: 233
Alignm identity: 167
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 25, 38

Conread position: 158-377
Cow position:
Alignm length: 234
Alignm identity: 181
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 30, 0

Conread position: 158-378
Cow position:
Alignm length: 236
Alignm identity: 179
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 29, 209

Conread position: 158-378
Cow position:
Alignm length: 237
Alignm identity: 176
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 28, 109

Conread position: 158-379
Cow position:
Alignm length: 232
Alignm identity: 173
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 77, 18

Conread position: 158-379
Cow position:
Alignm length: 240
Alignm identity: 171
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 73, 10

Conread position: 158-379
Cow position:
Alignm length: 238
Alignm identity: 180
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 29, 213

Conread position: 158-379
Cow position:
Alignm length: 236
Alignm identity: 177
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 29, 60

Conread position: 158-379
Cow position:
Alignm length: 225
Alignm identity: 165
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 29, 125

Conread position: 158-379
Cow position:
Alignm length: 234
Alignm identity: 176
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 75, 18

Conread position: 159-274
Cow position:
Alignm length: 117
Alignm identity: 94
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 160-376
Cow position:
Alignm length: 231
Alignm identity: 175
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 20, 205

Conread position: 160-377
Cow position:
Alignm length: 231
Alignm identity: 180
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 73, 0

Conread position: 161-379
Cow position:
Alignm length: 232
Alignm identity: 176
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 20, 0

Conread position: 167-378
Cow position:
Alignm length: 225
Alignm identity: 164
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 66, 28

Conread position: 178-277
Cow position:
Alignm length: 102
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 179-376
Cow position:
Alignm length: 207
Alignm identity: 153
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 54, 103

Conread position: 184-379
Cow position:
Alignm length: 203
Alignm identity: 158
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 49, 182

Conread position: 199-376
Cow position:
Alignm length: 189
Alignm identity: 146
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 34, 0

Conread position: 205-379
Cow position:
Alignm length: 188
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 233-379
Cow position:
Alignm length: 154
Alignm identity: 119
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 72, 0

Conread position: 239-377
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 0

Show alignments to all cow chromosomes.