Cow genome map


           Conread name:
           Ss1.1-rcki014_i4.5
        

               Conread position:
               2-309
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               232
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               97, 174
               

               Conread position:
               3-319
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               10, 21
               

               Conread position:
               12-152
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               18-152
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               20-377
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 91
               

               Conread position:
               31-346
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 132
               

               Conread position:
               44-209
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               55, 77
               

               Conread position:
               44-209
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               64, 95
               

               Conread position:
               46-210
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               53, 79
               

               Conread position:
               47-277
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 153
               

               Conread position:
               54-209
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               45, 67
               

               Conread position:
               146-377
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               87, 231
               

               Conread position:
               157-383
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               185
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               30, 19
               

               Conread position:
               158-274
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               25, 100
               

               Conread position:
               158-349
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               47, 32
               

               Conread position:
               158-375
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               176
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               158-377
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               24, 43
               

               Conread position:
               158-377
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               158-378
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               75, 12
               

               Conread position:
               158-378
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               178
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               75, 23
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               76, 18
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               26, 18
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               183
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               76, 18
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               187
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               160-376
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               23, 90
               

               Conread position:
               160-379
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 135
               

               Conread position:
               168-326
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               19, 91
               

               Conread position:
               172-358
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               61, 121
               

               Conread position:
               184-379
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               99, 49
               

               Conread position:
               188-379
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               45, 175
               

               Conread position:
               191-379
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               43, 172
               
Show alignments to all cow chromosomes.