Cow genome map

Conread name: Ss1.1-rcki014_i4.5

Conread position: 1-185
Cow position:
Alignm length: 185
Alignm identity: 136
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 1-245
Cow position:
Alignm length: 248
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 75

Conread position: 1-321
Cow position:
Alignm length: 345
Alignm identity: 255
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 19, 28

Conread position: 1-328
Cow position:
Alignm length: 343
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 20

Conread position: 1-341
Cow position:
Alignm length: 357
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 37

Conread position: 1-341
Cow position:
Alignm length: 346
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 37

Conread position: 1-346
Cow position:
Alignm length: 364
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 269

Conread position: 1-346
Cow position:
Alignm length: 363
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 34

Conread position: 1-346
Cow position:
Alignm length: 363
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 64

Conread position: 23-345
Cow position:
Alignm length: 335
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 23-376
Cow position:
Alignm length: 378
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 12

Conread position: 43-346
Cow position:
Alignm length: 321
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 89

Conread position: 44-209
Cow position:
Alignm length: 179
Alignm identity: 137
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 65, 82

Conread position: 44-226
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 65, 172

Conread position: 45-209
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 45-379
Cow position:
Alignm length: 352
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 125

Conread position: 46-209
Cow position:
Alignm length: 168
Alignm identity: 139
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 46-211
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 46-218
Cow position:
Alignm length: 174
Alignm identity: 132
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 127, 72

Conread position: 46-267
Cow position:
Alignm length: 225
Alignm identity: 171
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 63, 106

Conread position: 47-209
Cow position:
Alignm length: 177
Alignm identity: 133
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 52, 76

Conread position: 47-227
Cow position:
Alignm length: 186
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 62, 110

Conread position: 52-207
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 121, 55

Conread position: 53-346
Cow position:
Alignm length: 303
Alignm identity: 209
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 50, 79

Conread position: 64-277
Cow position:
Alignm length: 219
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 75-346
Cow position:
Alignm length: 289
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 80-347
Cow position:
Alignm length: 284
Alignm identity: 212
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 29, 62

Conread position: 103-334
Cow position:
Alignm length: 241
Alignm identity: 186
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 63, 108

Conread position: 146-358
Cow position:
Alignm length: 227
Alignm identity: 176
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 37, 63

Conread position: 146-373
Cow position:
Alignm length: 239
Alignm identity: 181
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 37, 72

Conread position: 147-379
Cow position:
Alignm length: 247
Alignm identity: 191
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 40, 213

Conread position: 158-359
Cow position:
Alignm length: 204
Alignm identity: 156
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 29, 98

Conread position: 158-376
Cow position:
Alignm length: 230
Alignm identity: 179
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 75, 0

Conread position: 158-377
Cow position:
Alignm length: 234
Alignm identity: 184
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 75, 0

Conread position: 158-377
Cow position:
Alignm length: 232
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 75, 18

Conread position: 158-377
Cow position:
Alignm length: 231
Alignm identity: 170
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 75, 21

Conread position: 158-379
Cow position:
Alignm length: 239
Alignm identity: 177
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 29, 0

Conread position: 158-379
Cow position:
Alignm length: 235
Alignm identity: 180
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 24, 72

Conread position: 158-379
Cow position:
Alignm length: 233
Alignm identity: 171
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 75, 21

Conread position: 158-384
Cow position:
Alignm length: 242
Alignm identity: 183
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 75, 12

Conread position: 159-347
Cow position:
Alignm length: 201
Alignm identity: 162
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 24, 108

Conread position: 159-379
Cow position:
Alignm length: 224
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 17

Conread position: 160-328
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 160-346
Cow position:
Alignm length: 201
Alignm identity: 159
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 32, 16

Conread position: 160-379
Cow position:
Alignm length: 234
Alignm identity: 179
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 23, 0

Conread position: 160-381
Cow position:
Alignm length: 226
Alignm identity: 172
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 27, 222

Conread position: 178-332
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 56, 118

Conread position: 178-378
Cow position:
Alignm length: 213
Alignm identity: 154
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 55, 81

Conread position: 178-379
Cow position:
Alignm length: 206
Alignm identity: 154
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 56, 97

Conread position: 184-346
Cow position:
Alignm length: 164
Alignm identity: 130
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 49, 16

Conread position: 237-346
Cow position:
Alignm length: 111
Alignm identity: 89
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 70, 0

Show alignments to all cow chromosomes.