Cow genome map
| Conread name: | Ss1.1-rcki014_i4.5 |
| Conread position: | 1-240 |
| Cow position: | chr8:9804644-9804400 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 2-374 |
| Cow position: | chr8:9826850-9826463 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 108 |
| Conread position: | 3-332 |
| Cow position: | chr8:18715056-18714734 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 20 |
| Conread position: | 3-346 |
| Cow position: | chr8:48761051-48761407 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 3-346 |
| Cow position: | chr8:51993876-51993516 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 18 |
| Conread position: | 8-254 |
| Cow position: | chr8:47184469-47184724 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 40-155 |
| Cow position: | chr8:12840863-12840745 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 40-209 |
| Cow position: | chr8:25582494-25582323 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 59, 159 |
| Conread position: | 44-206 |
| Cow position: | chr8:54009433-54009598 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 46-209 |
| Cow position: | chr8:13847548-13847386 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 54, 5 |
| Conread position: | 46-209 |
| Cow position: | chr8:45857946-45858113 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 47-368 |
| Cow position: | chr8:1282129-1281804 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 79 |
| Conread position: | 84-379 |
| Cow position: | chr8:52013165-52012855 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 162 |
| Conread position: | 158-264 |
| Cow position: | chr8:51971961-51971853 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 91 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 158-307 |
| Cow position: | chr8:50395002-50394853 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 126 |
| Conread position: | 158-375 |
| Cow position: | chr8:19965162-19964933 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 29, 38 |
| Conread position: | 158-379 |
| Cow position: | chr8:6865003-6865231 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 28, 113 |
| Conread position: | 158-379 |
| Cow position: | chr8:35427457-35427673 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 7, 102 |
| Conread position: | 158-379 |
| Cow position: | chr8:37472598-37472365 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 75, 206 |
| Conread position: | 158-379 |
| Cow position: | chr8:37532854-37533091 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 29, 210 |
| Conread position: | 158-379 |
| Cow position: | chr8:51237372-51237607 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 29, 203 |
| Conread position: | 158-379 |
| Cow position: | chr8:61548082-61548292 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 73, 24 |
| Conread position: | 159-379 |
| Cow position: | chr8:36517107-36517333 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 21, 201 |
| Conread position: | 160-374 |
| Cow position: | chr8:43021091-43021315 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 20, 123 |
| Conread position: | 160-377 |
| Cow position: | chr8:51576116-51575887 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 23, 10 |
| Conread position: | 169-326 |
| Cow position: | chr8:8707016-8706854 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 65, 40 |
| Conread position: | 178-373 |
| Cow position: | chr8:52000775-52000568 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 55, 186 |
| Conread position: | 178-379 |
| Cow position: | chr8:1284480-1284267 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 55, 186 |
| Conread position: | 179-303 |
| Cow position: | chr8:58271778-58271653 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 215-379 |
| Cow position: | chr8:53341680-53341856 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 18, 149 |
| Conread position: | 232-346 |
| Cow position: | chr8:9804131-9804009 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
Show alignments to all cow chromosomes.