Cow genome map


           Conread name:
           Ss1.1-rcki014_i4.5
        

               Conread position:
               1-344
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               249
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               68, 22
               

               Conread position:
               1-346
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               12, 20
               

               Conread position:
               1-346
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 42
               

               Conread position:
               1-346
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 34
               

               Conread position:
               1-347
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 57
               

               Conread position:
               1-374
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 15
               

               Conread position:
               2-345
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               250
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               105, 29
               

               Conread position:
               2-346
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 34
               

               Conread position:
               3-193
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               96, 58
               

               Conread position:
               8-346
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 27
               

               Conread position:
               8-355
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 50
               

               Conread position:
               34-209
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               7, 89
               

               Conread position:
               40-227
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               45, 176
               

               Conread position:
               44-157
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               44-209
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               55, 77
               

               Conread position:
               44-209
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               129, 65
               

               Conread position:
               44-209
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               44-210
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               44-333
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               263, 35
               

               Conread position:
               44-356
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 309
               

               Conread position:
               47-209
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               20, 74
               

               Conread position:
               47-209
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               47-209
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               47-341
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 134
               

               Conread position:
               87-346
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               208
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               11, 124
               

               Conread position:
               104-347
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               129, 103
               

               Conread position:
               111-346
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               190
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               72, 100
               

               Conread position:
               143-375
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               144-379
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               14, 104
               

               Conread position:
               146-368
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               146-375
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               187
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               35, 198
               

               Conread position:
               146-379
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               41, 203
               

               Conread position:
               146-379
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               84, 30
               

               Conread position:
               146-379
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               87, 30
               

               Conread position:
               158-310
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               158-370
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               75, 36
               

               Conread position:
               158-376
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               72, 99
               

               Conread position:
               158-376
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               181
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               158-376
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               158-376
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               158-376
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               75, 10
               

               Conread position:
               158-377
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               75, 18
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               77, 25
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               75, 10
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               185
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               75, 24
               

               Conread position:
               158-382
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               75, 24
               

               Conread position:
               159-378
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               24, 14
               

               Conread position:
               178-377
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               182-380
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               51, 184
               

               Conread position:
               184-379
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               155
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               49, 132
               

               Conread position:
               188-346
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               45, 21
               

               Conread position:
               196-378
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               37, 61
               

               Conread position:
               196-379
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               37, 63
               

               Conread position:
               225-379
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 131
               

               Conread position:
               232-375
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               57, 0
               
Show alignments to all cow chromosomes.