Cow genome map

Conread name: Ss1.1-rcki014_i4.5

Conread position: 1-328
Cow position: chrX:44744944-44745282 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 242
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 95, 42

Conread position: 3-333
Cow position: chrX:28859187-28858851 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 16

Conread position: 14-346
Cow position: chrX:29035827-29036178 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 22-328
Cow position: chrX:46813225-46813541 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 106

Conread position: 43-281
Cow position: chrX:22436869-22437111 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 231

Conread position: 44-208
Cow position: chrX:34626397-34626564 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 60, 85

Conread position: 44-209
Cow position: chrX:25266979-25266802 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 55, 77

Conread position: 44-240
Cow position: chrX:45570032-45569836 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 143, 72

Conread position: 46-199
Cow position: chrX:33159231-33159075 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 47-225
Cow position: chrX:38129055-38129242 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 93, 161

Conread position: 47-232
Cow position: chrX:1742758-1742944 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 166

Conread position: 49-209
Cow position: chrX:16893768-16893608 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 38, 52

Conread position: 49-234
Cow position: chrX:29815981-29815803 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 136, 105

Conread position: 50-208
Cow position: chrX:40316032-40315871 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 92

Conread position: 92-251
Cow position: chrX:32751667-32751830 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 118

Conread position: 100-353
Cow position: chrX:30026623-30026874 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 191
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 133, 50

Conread position: 146-376
Cow position: chrX:7544814-7544568 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 184
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 134, 0

Conread position: 158-272
Cow position: chrX:47119562-47119677 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 72, 0

Conread position: 158-302
Cow position: chrX:41387552-41387407 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 23, 136

Conread position: 158-375
Cow position: chrX:15327825-15328056 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 29, 0

Conread position: 158-378
Cow position: chrX:9342444-9342673 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 75, 24

Conread position: 158-379
Cow position: chrX:25200807-25201035 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 177
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 75, 16

Conread position: 158-379
Cow position: chrX:34814075-34813845 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 75, 25

Conread position: 158-383
Cow position: chrX:26246382-26246146 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 182
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 75, 18

Conread position: 160-293
Cow position: chrX:47296684-47296818 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 178-327
Cow position: chrX:32018688-32018842 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 178-357
Cow position: chrX:39732028-39731848 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 55, 115

Conread position: 178-379
Cow position: chrX:39205673-39205885 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 56, 183

Conread position: 187-379
Cow position: chrX:25190804-25190602 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 46, 177

Conread position: 208-376
Cow position: chrX:47340010-47340188 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 72, 21

Conread position: 233-379
Cow position: chrX:1181635-1181791 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 127

Show alignments to all cow chromosomes.