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Cow genome map

           
Conread name:
           
Ss1.1-rcki016_h19.5
        

               
Conread position:
               
128-256
               

               
Cow position:
               
chr18:56288181-56288053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
128-259
               

               
Cow position:
               
chr18:56332265-56332134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
341-840
               

               
Cow position:
               
chr18:40324961-40324464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
15, 55
               

               
Conread position:
               
351-797
               

               
Cow position:
               
chr18:42674970-42674524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
38, 148
               

               
Conread position:
               
351-840
               

               
Cow position:
               
chr18:41198178-41198667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
25, 148
               

               
Conread position:
               
356-796
               

               
Cow position:
               
chr18:42675550-42675113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
48, 54
               

               
Conread position:
               
356-797
               

               
Cow position:
               
chr18:56316153-56316594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
20, 143
               

               
Conread position:
               
374-684
               

               
Cow position:
               
chr18:41948635-41948327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
305, 114
               

               
Conread position:
               
374-746
               

               
Cow position:
               
chr18:44397894-44397524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
89, 112
               

               
Conread position:
               
374-784
               

               
Cow position:
               
chr18:56247950-56247533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
87, 44
               

               
Conread position:
               
374-796
               

               
Cow position:
               
chr18:43093293-43092874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
88, 112
               

               
Conread position:
               
374-796
               

               
Cow position:
               
chr18:43093629-43093209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
130, 87
               

               
Conread position:
               
374-797
               

               
Cow position:
               
chr18:41197784-41198204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 103
               

               
Conread position:
               
374-835
               

               
Cow position:
               
chr18:42744508-42744050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
368, 107
               

               
Conread position:
               
379-769
               

               
Cow position:
               
chr18:14453242-14452855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
82, 91
               

               
Conread position:
               
379-796
               

               
Cow position:
               
chr18:41197957-41198371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 91
               

               
Conread position:
               
380-778
               

               
Cow position:
               
chr18:49032495-49032100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
83, 97
               

               
Conread position:
               
380-796
               

               
Cow position:
               
chr18:52427764-52428177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
115, 100
               

               
Conread position:
               
380-796
               

               
Cow position:
               
chr18:52433113-52433526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
115, 100
               

               
Conread position:
               
380-796
               

               
Cow position:
               
chr18:52433281-52433694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
106, 116
               

               
Conread position:
               
380-797
               

               
Cow position:
               
chr18:43093704-43093293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
121, 36
               

               
Conread position:
               
380-800
               

               
Cow position:
               
chr18:41198294-41198711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
178, 101
               

               
Conread position:
               
380-809
               

               
Cow position:
               
chr18:42837553-42837127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
101, 116
               

               
Conread position:
               
380-829
               

               
Cow position:
               
chr18:41197706-41198154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
183, 101
               

               
Conread position:
               
381-796
               

               
Cow position:
               
chr18:51367966-51367555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
98, 115
               

               
Conread position:
               
382-797
               

               
Cow position:
               
chr18:40324583-40324171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
351, 101
               

               
Conread position:
               
383-693
               

               
Cow position:
               
chr18:43174801-43174495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
103, 7
               

               
Conread position:
               
383-765
               

               
Cow position:
               
chr18:44184332-44183953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
92, 79
               

               
Conread position:
               
383-778
               

               
Cow position:
               
chr18:43120105-43119713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
112, 70
               

               
Conread position:
               
383-796
               

               
Cow position:
               
chr18:33064804-33064394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
103, 113
               

               
Conread position:
               
383-796
               

               
Cow position:
               
chr18:41949130-41948720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
90, 76
               

               
Conread position:
               
383-796
               

               
Cow position:
               
chr18:42837718-42837308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
103, 113
               

               
Conread position:
               
383-796
               

               
Cow position:
               
chr18:43175222-43174812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
121, 83
               

               
Conread position:
               
383-796
               

               
Cow position:
               
chr18:52427599-52428009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
33, 24
               

               
Conread position:
               
383-796
               

               
Cow position:
               
chr18:52428187-52428597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
98, 113
               

               
Conread position:
               
383-796
               

               
Cow position:
               
chr18:52432948-52433358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 24
               

               
Conread position:
               
383-796
               

               
Cow position:
               
chr18:52433368-52433778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
97, 113
               

               
Conread position:
               
383-799
               

               
Cow position:
               
chr18:52428439-52428852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
98, 113
               

               
Conread position:
               
383-799
               

               
Cow position:
               
chr18:52433620-52434033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
98, 113
               

               
Conread position:
               
383-824
               

               
Cow position:
               
chr18:51789591-51789153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
156, 102
               

               
Conread position:
               
383-835
               

               
Cow position:
               
chr18:51812330-51811881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
67, 87
               

               
Conread position:
               
384-676
               

               
Cow position:
               
chr18:1418305-1418594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
384-712
               

               
Cow position:
               
chr18:43048677-43048352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
77, 86
               

               
Conread position:
               
384-715
               

               
Cow position:
               
chr18:53509457-53509785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
120, 72
               

               
Conread position:
               
384-740
               

               
Cow position:
               
chr18:54979779-54980132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
175, 77
               

               
Conread position:
               
384-765
               

               
Cow position:
               
chr18:41198382-41198760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
171, 85
               

               
Conread position:
               
384-784
               

               
Cow position:
               
chr18:42744246-42743849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
102, 112
               

               
Conread position:
               
384-796
               

               
Cow position:
               
chr18:44184415-44184006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
179, 101
               

               
Conread position:
               
384-796
               

               
Cow position:
               
chr18:44184583-44184174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
102, 112
               

               
Conread position:
               
384-824
               

               
Cow position:
               
chr18:52447159-52447596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
47, 33
               

               
Conread position:
               
384-824
               

               
Cow position:
               
chr18:52447411-52447848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
192, 115
               

               
Conread position:
               
384-836
               

               
Cow position:
               
chr18:40075242-40075691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
43, 34
               

               
Conread position:
               
384-840
               

               
Cow position:
               
chr18:42985090-42984636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 79
               

               
Conread position:
               
384-840
               

               
Cow position:
               
chr18:54993123-54993576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
384-840
               

               
Cow position:
               
chr18:55018099-55018552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
174, 101
               

               
Conread position:
               
386-796
               

               
Cow position:
               
chr18:42792276-42792684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
5, 111
               

               
Conread position:
               
386-799
               

               
Cow position:
               
chr18:50083839-50084249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
387-797
               

               
Cow position:
               
chr18:50099281-50099688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
77, 88
               

               
Conread position:
               
387-800
               

               
Cow position:
               
chr18:41197629-41198039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
98, 108
               

               
Conread position:
               
387-835
               

               
Cow position:
               
chr18:40086715-40086267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
183, 34
               

               
Conread position:
               
388-776
               

               
Cow position:
               
chr18:42792111-42792496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
185, 100
               

               
Conread position:
               
388-784
               

               
Cow position:
               
chr18:44240400-44240793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
71, 82
               

               
Conread position:
               
388-791
               

               
Cow position:
               
chr18:52447499-52447899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
334, 97
               

               
Conread position:
               
388-796
               

               
Cow position:
               
chr18:43022428-43022023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
73, 82
               

               
Conread position:
               
388-796
               

               
Cow position:
               
chr18:44154144-44153746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
122, 65
               

               
Conread position:
               
388-796
               

               
Cow position:
               
chr18:44239980-44240385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
340, 94
               

               
Conread position:
               
388-800
               

               
Cow position:
               
chr18:54993379-54993788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
170, 97
               

               
Conread position:
               
388-835
               

               
Cow position:
               
chr18:42960571-42960136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
98, 60
               

               
Conread position:
               
388-837
               

               
Cow position:
               
chr18:42744578-42744132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 108
               

               
Conread position:
               
388-837
               

               
Cow position:
               
chr18:54980035-54980481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 73
               

               
Conread position:
               
388-840
               

               
Cow position:
               
chr18:43022680-43022231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
162, 91
               

               
Conread position:
               
388-840
               

               
Cow position:
               
chr18:52447751-52448200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
354, 97
               

               
Conread position:
               
389-767
               

               
Cow position:
               
chr18:40324324-40323949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
362, 93
               

               
Conread position:
               
389-796
               

               
Cow position:
               
chr18:44184914-44184510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
72, 76
               

               
Conread position:
               
389-796
               

               
Cow position:
               
chr18:52428109-52428513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
97, 107
               

               
Conread position:
               
389-797
               

               
Cow position:
               
chr18:40324492-40324087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
97, 107
               

               
Conread position:
               
390-672
               

               
Cow position:
               
chr18:42984747-42984468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
96, 64
               

               
Conread position:
               
390-702
               

               
Cow position:
               
chr18:44153975-44153672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
170, 72
               

               
Conread position:
               
390-711
               

               
Cow position:
               
chr18:44253666-44253349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
67, 88
               

               
Conread position:
               
390-715
               

               
Cow position:
               
chr18:43119846-43119524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
96, 105
               

               
Conread position:
               
390-731
               

               
Cow position:
               
chr18:43022342-43022004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
72, 80
               

               
Conread position:
               
390-731
               

               
Cow position:
               
chr18:44240486-44240824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
96, 71
               

               
Conread position:
               
390-751
               

               
Cow position:
               
chr18:43168185-43168543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
18, 26
               

               
Conread position:
               
390-752
               

               
Cow position:
               
chr18:42827545-42827904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
330, 82
               

               
Conread position:
               
390-753
               

               
Cow position:
               
chr18:42674760-42674400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
245, 95
               

               
Conread position:
               
390-776
               

               
Cow position:
               
chr18:50848728-50849111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
114, 72
               

               
Conread position:
               
390-784
               

               
Cow position:
               
chr18:40324407-40324016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
79, 73
               

               
Conread position:
               
390-784
               

               
Cow position:
               
chr18:41949207-41948816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
71, 77
               

               
Conread position:
               
390-784
               

               
Cow position:
               
chr18:42984915-42984524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
56, 80
               

               
Conread position:
               
390-784
               

               
Cow position:
               
chr18:44239814-44240205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
149, 81
               

               
Conread position:
               
390-791
               

               
Cow position:
               
chr18:42960158-42959760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
96, 106
               

               
Conread position:
               
390-796
               

               
Cow position:
               
chr18:42744324-42743921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
89, 106
               

               
Conread position:
               
390-796
               

               
Cow position:
               
chr18:43022762-43022359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
121, 95
               

               
Conread position:
               
390-796
               

               
Cow position:
               
chr18:43174963-43174560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 84
               

               
Conread position:
               
390-796
               

               
Cow position:
               
chr18:44184493-44184090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
192, 90
               

               
Conread position:
               
390-796
               

               
Cow position:
               
chr18:44398382-44397979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
349, 88
               

               
Conread position:
               
390-796
               

               
Cow position:
               
chr18:54979617-54980020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
72, 83
               

               
Conread position:
               
390-797
               

               
Cow position:
               
chr18:1417975-1418379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
96, 106
               

               
Conread position:
               
390-797
               

               
Cow position:
               
chr18:44240066-44240471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
121, 82
               

               
Conread position:
               
390-816
               

               
Cow position:
               
chr18:41198136-41198559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 92
               

               
Conread position:
               
390-824
               

               
Cow position:
               
chr18:51812827-51812396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
96, 105
               

               
Conread position:
               
390-828
               

               
Cow position:
               
chr18:43175467-43175032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
121, 72
               

               
Conread position:
               
390-835
               

               
Cow position:
               
chr18:42674844-42674402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
96, 106
               

               
Conread position:
               
390-835
               

               
Cow position:
               
chr18:44240318-44240760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
71, 75
               

               
Conread position:
               
390-840
               

               
Cow position:
               
chr18:40086123-40085683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
121, 71
               

               
Conread position:
               
390-840
               

               
Cow position:
               
chr18:42675012-42674565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
71, 106
               

               
Conread position:
               
390-840
               

               
Cow position:
               
chr18:43175131-43174684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
72, 87
               

               
Conread position:
               
391-784
               

               
Cow position:
               
chr18:44184660-44184270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
70, 84
               

               
Conread position:
               
391-796
               

               
Cow position:
               
chr18:42837878-42837476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 70
               

               
Conread position:
               
391-803
               

               
Cow position:
               
chr18:41948786-41948378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
95, 105
               

               
Conread position:
               
392-837
               

               
Cow position:
               
chr18:33064627-33064185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
112, 87
               

               
Conread position:
               
394-800
               

               
Cow position:
               
chr18:42791697-42792100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
85, 102
               

               
Conread position:
               
395-797
               

               
Cow position:
               
chr18:42791950-42792349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
106, 87
               

               
Conread position:
               
396-797
               

               
Cow position:
               
chr18:42791783-42792181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
105, 76
               

               
Conread position:
               
396-840
               

               
Cow position:
               
chr18:44184739-44184298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
65, 69
               

               
Conread position:
               
397-796
               

               
Cow position:
               
chr18:43175292-43174896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 99
               

               
Conread position:
               
398-771
               

               
Cow position:
               
chr18:42675172-42674802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
82, 98
               

               
Conread position:
               
398-781
               

               
Cow position:
               
chr18:44253251-44252879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
88, 98
               

               
Conread position:
               
398-796
               

               
Cow position:
               
chr18:42985243-42984848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
175, 87
               

               
Conread position:
               
398-796
               

               
Cow position:
               
chr18:43023090-43022695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
157, 66
               

               
Conread position:
               
398-796
               

               
Cow position:
               
chr18:50848484-50848879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
344, 84
               

               
Conread position:
               
398-796
               

               
Cow position:
               
chr18:51368453-51368058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
398-797
               

               
Cow position:
               
chr18:40306738-40307134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
335, 101
               

               
Conread position:
               
398-797
               

               
Cow position:
               
chr18:42790945-42791341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
103, 83
               

               
Conread position:
               
398-802
               

               
Cow position:
               
chr18:42791113-42791514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
88, 98
               

               
Conread position:
               
398-837
               

               
Cow position:
               
chr18:33093041-33092605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
88, 98
               

               
Conread position:
               
398-837
               

               
Cow position:
               
chr18:41197556-41197992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
334, 84
               

               
Conread position:
               
398-840
               

               
Cow position:
               
chr18:43120006-43119567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
88, 98
               

               
Conread position:
               
403-715
               

               
Cow position:
               
chr18:1418240-1418549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
403-778
               

               
Cow position:
               
chr18:44398033-44397661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
83, 92
               

               
Conread position:
               
403-784
               

               
Cow position:
               
chr18:42985322-42984944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
101, 58
               

               
Conread position:
               
403-784
               

               
Cow position:
               
chr18:51367609-51367231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
83, 93
               

               
Conread position:
               
403-835
               

               
Cow position:
               
chr18:43022497-43022068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
58, 62
               

               
Conread position:
               
403-840
               

               
Cow position:
               
chr18:54992974-54993408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
60, 75
               

               
Conread position:
               
404-784
               

               
Cow position:
               
chr18:43048741-43048364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
69, 92
               

               
Conread position:
               
404-797
               

               
Cow position:
               
chr18:44398200-44397810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
82, 92
               

               
Conread position:
               
405-796
               

               
Cow position:
               
chr18:51812644-51812256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
56, 76
               

               
Conread position:
               
405-840
               

               
Cow position:
               
chr18:44154379-44153948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
90, 56
               

               
Conread position:
               
412-808
               

               
Cow position:
               
chr18:44253893-44253503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
330, 7
               

               
Conread position:
               
413-830
               

               
Cow position:
               
chr18:56247484-56247077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
329, 22
               

               
Conread position:
               
415-790
               

               
Cow position:
               
chr18:49032880-49032508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 81
               

               
Conread position:
               
415-790
               

               
Cow position:
               
chr18:49033132-49032760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
137, 73
               

               
Conread position:
               
415-796
               

               
Cow position:
               
chr18:55067028-55066650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 81
               

               
Conread position:
               
415-840
               

               
Cow position:
               
chr18:33064016-33063594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
71, 80
               

               
Conread position:
               
418-790
               

               
Cow position:
               
chr18:50059538-50059169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
67, 76
               

               
Conread position:
               
418-796
               

               
Cow position:
               
chr18:40306422-40306797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
123, 67
               

               
Conread position:
               
418-797
               

               
Cow position:
               
chr18:43093165-43092790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
45, 52
               

               
Conread position:
               
418-799
               

               
Cow position:
               
chr18:50059286-50058908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
68, 74
               

               
Conread position:
               
418-837
               

               
Cow position:
               
chr18:40306674-40307090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
237, 56
               

               
Conread position:
               
418-840
               

               
Cow position:
               
chr18:40324715-40324296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
133, 67
               

               
Conread position:
               
421-784
               

               
Cow position:
               
chr18:44154027-44153674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
134, 45
               

               
Conread position:
               
422-840
               

               
Cow position:
               
chr18:55017968-55018384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
9, 52
               

               
Conread position:
               
423-753
               

               
Cow position:
               
chr18:42837426-42837099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
423-784
               

               
Cow position:
               
chr18:41949342-41948984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
159, 49
               

               
Conread position:
               
423-796
               

               
Cow position:
               
chr18:40306595-40306965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
38, 61
               

               
Conread position:
               
423-797
               

               
Cow position:
               
chr18:43168134-43168505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
78, 58
               

               
Conread position:
               
423-837
               

               
Cow position:
               
chr18:40086424-40086015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
329, 58
               

               
Conread position:
               
427-790
               

               
Cow position:
               
chr18:40086006-40085649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
155, 36
               

               
Conread position:
               
427-797
               

               
Cow position:
               
chr18:33064172-33063805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
54, 69
               

               
Conread position:
               
427-840
               

               
Cow position:
               
chr18:53635446-53635036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
305, 44
               

               
Conread position:
               
429-797
               

               
Cow position:
               
chr18:42792236-42792601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
72, 52
               

               
Conread position:
               
450-798
               

               
Cow position:
               
chr18:53635507-53635162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
272, 38
               

               
Conread position:
               
450-798
               

               
Cow position:
               
chr18:56128658-56129003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
272, 38
               

               
Conread position:
               
482-800
               

               
Cow position:
               
chr18:50058890-50058571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
482-840
               

               
Cow position:
               
chr18:54979623-54979980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
260, 21
               

               
Conread position:
               
483-840
               

               
Cow position:
               
chr18:55017944-55018300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
259, 15
               

               
Conread position:
               
490-784
               

               
Cow position:
               
chr18:53525761-53526056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 76
               

               
Conread position:
               
490-797
               

               
Cow position:
               
chr18:56248249-56247950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
490-840
               

               
Cow position:
               
chr18:42744732-42744381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
14, 261
               

               
Conread position:
               
494-797
               

               
Cow position:
               
chr18:33064445-33064141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
10, 258
               

               
Conread position:
               
494-829
               

               
Cow position:
               
chr18:42985402-42985067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
56, 64
               

               
Conread position:
               
494-840
               

               
Cow position:
               
chr18:43022913-43022567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
79, 88
               

               
Conread position:
               
496-784
               

               
Cow position:
               
chr18:14453296-14453008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
251, 246
               

               
Conread position:
               
496-796
               

               
Cow position:
               
chr18:52428381-52428681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
496-796
               

               
Cow position:
               
chr18:52433562-52433862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
496-797
               

               
Cow position:
               
chr18:42791124-42791425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
67, 50
               

               
Conread position:
               
496-797
               

               
Cow position:
               
chr18:42792552-42792853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
78, 86
               

               
Conread position:
               
496-797
               

               
Cow position:
               
chr18:50246237-50246538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
67, 43
               

               
Conread position:
               
496-797
               

               
Cow position:
               
chr18:56329943-56329642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
5, 9
               

               
Conread position:
               
496-837
               

               
Cow position:
               
chr18:50246489-50246830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
5, 9
               

               
Conread position:
               
497-793
               

               
Cow position:
               
chr18:44253239-44252944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
76, 85
               

               
Conread position:
               
497-796
               

               
Cow position:
               
chr18:42827397-42827696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
245, 250
               

               
Conread position:
               
497-796
               

               
Cow position:
               
chr18:42985567-42985268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
242, 221
               

               
Conread position:
               
497-796
               

               
Cow position:
               
chr18:51765249-51764950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 77
               

               
Conread position:
               
497-796
               

               
Cow position:
               
chr18:53509231-53509530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
26, 21
               

               
Conread position:
               
497-797
               

               
Cow position:
               
chr18:33092862-33092561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
7, 251
               

               
Conread position:
               
497-797
               

               
Cow position:
               
chr18:42675328-42675028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
236, 241
               

               
Conread position:
               
497-797
               

               
Cow position:
               
chr18:43023078-43022778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
53, 77
               

               
Conread position:
               
497-824
               

               
Cow position:
               
chr18:52447016-52447344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 226
               

               
Conread position:
               
497-837
               

               
Cow position:
               
chr18:42675161-42674820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
7, 254
               

               
Conread position:
               
497-840
               

               
Cow position:
               
chr18:40075016-40075359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
105, 97
               

               
Conread position:
               
500-796
               

               
Cow position:
               
chr18:42959725-42959428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
11, 247
               

               
Conread position:
               
500-796
               

               
Cow position:
               
chr18:49032715-49032418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
5, 228
               

               
Conread position:
               
500-797
               

               
Cow position:
               
chr18:51873696-51873993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
80, 65
               

               
Conread position:
               
502-840
               

               
Cow position:
               
chr18:42837938-42837600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
240, 248
               

               
Conread position:
               
502-840
               

               
Cow position:
               
chr18:44184888-44184550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
150, 131
               

               
Conread position:
               
502-840
               

               
Cow position:
               
chr18:53560008-53560346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
217, 240
               

               
Conread position:
               
503-715
               

               
Cow position:
               
chr18:42744046-42743834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
503-715
               

               
Cow position:
               
chr18:56494263-56494475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
503-753
               

               
Cow position:
               
chr18:42984721-42984471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
44, 65
               

               
Conread position:
               
503-769
               

               
Cow position:
               
chr18:51368435-51368169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
239, 244
               

               
Conread position:
               
503-769
               

               
Cow position:
               
chr18:52448115-52448382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
172, 214
               

               
Conread position:
               
503-771
               

               
Cow position:
               
chr18:56248160-56247893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
257, 0
               

               
Conread position:
               
503-776
               

               
Cow position:
               
chr18:43093995-43093722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
58, 47
               

               
Conread position:
               
503-776
               

               
Cow position:
               
chr18:43174769-43174496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
236, 223
               

               
Conread position:
               
503-777
               

               
Cow position:
               
chr18:33092771-33092497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
58, 67
               

               
Conread position:
               
503-778
               

               
Cow position:
               
chr18:14454021-14453746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
52, 71
               

               
Conread position:
               
503-784
               

               
Cow position:
               
chr18:51752168-51751887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 71
               

               
Conread position:
               
503-784
               

               
Cow position:
               
chr18:51789054-51788773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
217, 213
               

               
Conread position:
               
503-784
               

               
Cow position:
               
chr18:51874062-51874336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 71
               

               
Conread position:
               
503-790
               

               
Cow position:
               
chr18:43119820-43119533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
54, 47
               

               
Conread position:
               
503-791
               

               
Cow position:
               
chr18:52428640-52428928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
56, 71
               

               
Conread position:
               
503-791
               

               
Cow position:
               
chr18:52433821-52434109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
56, 71
               

               
Conread position:
               
503-796
               

               
Cow position:
               
chr18:41949349-41949056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
70, 78
               

               
Conread position:
               
503-796
               

               
Cow position:
               
chr18:51789306-51789013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
73, 62
               

               
Conread position:
               
503-796
               

               
Cow position:
               
chr18:53525943-53526236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
50, 64
               

               
Conread position:
               
503-796
               

               
Cow position:
               
chr18:53559925-53560218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 35
               

               
Conread position:
               
503-796
               

               
Cow position:
               
chr18:53560093-53560386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
239, 244
               

               
Conread position:
               
503-797
               

               
Cow position:
               
chr18:1418253-1418547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
238, 248
               

               
Conread position:
               
503-797
               

               
Cow position:
               
chr18:33065023-33064729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 44
               

               
Conread position:
               
503-797
               

               
Cow position:
               
chr18:51368183-51367889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
168, 138
               

               
Conread position:
               
503-798
               

               
Cow position:
               
chr18:1418001-1418296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
174, 168
               

               
Conread position:
               
503-800
               

               
Cow position:
               
chr18:43048729-43048432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
239, 244
               

               
Conread position:
               
503-800
               

               
Cow position:
               
chr18:51400783-51401080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
146, 152
               

               
Conread position:
               
503-816
               

               
Cow position:
               
chr18:52427968-52428281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
56, 71
               

               
Conread position:
               
503-835
               

               
Cow position:
               
chr18:14453205-14452873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
39, 34
               

               
Conread position:
               
503-835
               

               
Cow position:
               
chr18:42744634-42744302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
230, 236
               

               
Conread position:
               
503-835
               

               
Cow position:
               
chr18:43093419-43093087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
225, 215
               

               
Conread position:
               
503-835
               

               
Cow position:
               
chr18:44154455-44154120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
57, 250
               

               
Conread position:
               
503-840
               

               
Cow position:
               
chr18:40306252-40306589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
236, 223
               

               
Conread position:
               
503-840
               

               
Cow position:
               
chr18:40306420-40306757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
70, 78
               

               
Conread position:
               
503-840
               

               
Cow position:
               
chr18:40306924-40307261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
235, 226
               

               
Conread position:
               
503-840
               

               
Cow position:
               
chr18:42837685-42837348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
230, 240
               

               
Conread position:
               
503-840
               

               
Cow position:
               
chr18:44253972-44253639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
36, 49
               

               
Conread position:
               
503-840
               

               
Cow position:
               
chr18:49032627-49032290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
214, 235
               

               
Conread position:
               
503-840
               

               
Cow position:
               
chr18:52447947-52448284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
220, 214
               

               
Conread position:
               
503-840
               

               
Cow position:
               
chr18:53560177-53560514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
200, 227
               

               
Conread position:
               
503-840
               

               
Cow position:
               
chr18:55018299-55018636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
58, 36
               

               
Conread position:
               
504-795
               

               
Cow position:
               
chr18:53509322-53509613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
53, 61
               

               
Conread position:
               
504-796
               

               
Cow position:
               
chr18:53498477-53498768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
504-797
               

               
Cow position:
               
chr18:50083702-50083995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
238, 243
               

               
Conread position:
               
504-797
               

               
Cow position:
               
chr18:50849007-50849300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
69, 79
               

               
Conread position:
               
504-797
               

               
Cow position:
               
chr18:51812380-51812087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
146, 152
               

               
Conread position:
               
504-797
               

               
Cow position:
               
chr18:53560430-53560723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
53, 59
               

               
Conread position:
               
504-797
               

               
Cow position:
               
chr18:56329515-56329222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
237, 247
               

               
Conread position:
               
504-840
               

               
Cow position:
               
chr18:49032962-49032626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
238, 246
               

               
Conread position:
               
504-840
               

               
Cow position:
               
chr18:51400700-51401036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
127, 136
               

               
Conread position:
               
505-796
               

               
Cow position:
               
chr18:44239758-44240049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
44, 69
               

               
Conread position:
               
505-796
               

               
Cow position:
               
chr18:51400869-51401161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
52, 34
               

               
Conread position:
               
506-840
               

               
Cow position:
               
chr18:43175271-43174936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
5, 233
               

               
Conread position:
               
510-778
               

               
Cow position:
               
chr18:43120233-43119965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
29, 53
               

               
Conread position:
               
510-784
               

               
Cow position:
               
chr18:33093100-33092826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 8
               

               
Conread position:
               
510-791
               

               
Cow position:
               
chr18:42960125-42959844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
50, 60
               

               
Conread position:
               
510-796
               

               
Cow position:
               
chr18:33064260-33063974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
51, 56
               

               
Conread position:
               
510-796
               

               
Cow position:
               
chr18:40086508-40086222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
241, 232
               

               
Conread position:
               
510-796
               

               
Cow position:
               
chr18:41948838-41948552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
510-796
               

               
Cow position:
               
chr18:42960293-42960007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
64, 72
               

               
Conread position:
               
510-796
               

               
Cow position:
               
chr18:43168134-43168420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
63, 71
               

               
Conread position:
               
510-796
               

               
Cow position:
               
chr18:44239847-44240133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
42, 51
               

               
Conread position:
               
510-797
               

               
Cow position:
               
chr18:52012436-52012150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 63
               

               
Conread position:
               
510-797
               

               
Cow position:
               
chr18:56316391-56316678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
212, 206
               

               
Conread position:
               
510-797
               

               
Cow position:
               
chr18:56330181-56329894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
215, 206
               

               
Conread position:
               
510-798
               

               
Cow position:
               
chr18:43167966-43168254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
63, 71
               

               
Conread position:
               
510-798
               

               
Cow position:
               
chr18:53610125-53609837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
212, 206
               

               
Conread position:
               
510-803
               

               
Cow position:
               
chr18:33064344-33064051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
40, 52
               

               
Conread position:
               
510-836
               

               
Cow position:
               
chr18:44253885-44253559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
232, 237
               

               
Conread position:
               
510-840
               

               
Cow position:
               
chr18:40086174-40085852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
53, 47
               

               
Conread position:
               
510-840
               

               
Cow position:
               
chr18:42984882-42984552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
72, 60
               

               
Conread position:
               
510-840
               

               
Cow position:
               
chr18:56329341-56329011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 73
               

               
Conread position:
               
511-794
               

               
Cow position:
               
chr18:52446946-52447230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
12, 73
               

               
Conread position:
               
511-796
               

               
Cow position:
               
chr18:51367588-51367303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
62, 73
               

               
Conread position:
               
511-800
               

               
Cow position:
               
chr18:44253310-44253020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
7, 55
               

               
Conread position:
               
512-824
               

               
Cow position:
               
chr18:41948920-41948608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
230, 235
               

               
Conread position:
               
513-715
               

               
Cow position:
               
chr18:53526037-53526239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
42, 57
               

               
Conread position:
               
513-797
               

               
Cow position:
               
chr18:41197500-41197784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
25, 30
               

               
Conread position:
               
514-797
               

               
Cow position:
               
chr18:43168054-43168337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
516-840
               

               
Cow position:
               
chr18:42790976-42791300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
226, 231
               

               
Conread position:
               
520-797
               

               
Cow position:
               
chr18:44398423-44398146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
35, 19
               

               
Conread position:
               
520-835
               

               
Cow position:
               
chr18:43175592-43175277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
201, 218
               

               
Conread position:
               
522-797
               

               
Cow position:
               
chr18:51839123-51838848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
198, 194
               

               
Conread position:
               
524-771
               

               
Cow position:
               
chr18:43053439-43053192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
58, 43
               

               
Conread position:
               
559-828
               

               
Cow position:
               
chr18:14453317-14453048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
90, 75
               

               
Conread position:
               
568-840
               

               
Cow position:
               
chr18:42837956-42837684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
174, 182
               

               
Conread position:
               
575-779
               

               
Cow position:
               
chr18:44239744-44239948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 71
               

               
Conread position:
               
575-797
               

               
Cow position:
               
chr18:40086949-40086727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
211, 175
               

               
Conread position:
               
576-778
               

               
Cow position:
               
chr18:51969822-51970024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
56, 64
               

               
Conread position:
               
576-784
               

               
Cow position:
               
chr18:51765926-51765718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
167, 174
               

               
Conread position:
               
576-796
               

               
Cow position:
               
chr18:42959732-42959512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
166, 174
               

               
Conread position:
               
576-796
               

               
Cow position:
               
chr18:42985572-42985352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
175, 167
               

               
Conread position:
               
576-840
               

               
Cow position:
               
chr18:43023083-43022819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
166, 171
               

               
Conread position:
               
576-840
               

               
Cow position:
               
chr18:43048740-43048476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
166, 175
               

               
Conread position:
               
577-796
               

               
Cow position:
               
chr18:51969330-51969549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
581-797
               

               
Cow position:
               
chr18:52012449-52012234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
162, 38
               

               
Conread position:
               
582-840
               

               
Cow position:
               
chr18:53586417-53586159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
150, 160
               

               
Conread position:
               
585-797
               

               
Cow position:
               
chr18:41949351-41949139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
157, 165
               

               
Conread position:
               
585-808
               

               
Cow position:
               
chr18:42960302-42960079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
157, 162
               

               
Conread position:
               
586-797
               

               
Cow position:
               
chr18:14454022-14453811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
153, 147
               

               
Conread position:
               
659-837
               

               
Cow position:
               
chr18:43048741-43048563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
83, 91
               
Show alignments to all cow chromosomes.