Cow genome map


           Conread name:
           Ss1.1-rcki016_h19.5
        

               Conread position:
               128-259
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               128-259
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               128-265
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               264-797
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               288
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               112, 220
               

               Conread position:
               315-828
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 40
               

               Conread position:
               351-836
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               303
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               31, 137
               

               Conread position:
               379-840
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               275
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               350, 92
               

               Conread position:
               379-840
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               277
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               350, 92
               

               Conread position:
               380-796
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               263
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               124, 76
               

               Conread position:
               384-715
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               176, 97
               

               Conread position:
               384-797
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               263
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               177, 97
               

               Conread position:
               384-797
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               195, 97
               

               Conread position:
               385-797
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               244
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               356, 87
               

               Conread position:
               387-816
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               269
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               74, 81
               

               Conread position:
               389-715
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               211
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               72, 81
               

               Conread position:
               389-768
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               97, 106
               

               Conread position:
               389-823
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               91, 105
               

               Conread position:
               390-681
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               390-791
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               122, 88
               

               Conread position:
               390-797
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               352, 95
               

               Conread position:
               390-797
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               263
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               114, 66
               

               Conread position:
               391-764
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               164, 90
               

               Conread position:
               398-840
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               277
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               88, 101
               

               Conread position:
               403-824
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               340, 85
               

               Conread position:
               404-778
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               63, 68
               

               Conread position:
               412-840
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               415-840
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               319, 84
               

               Conread position:
               415-840
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               281
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               46, 55
               

               Conread position:
               418-828
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               323, 48
               

               Conread position:
               418-828
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               68, 56
               

               Conread position:
               418-830
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               71, 77
               

               Conread position:
               418-835
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               268
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               43, 57
               

               Conread position:
               418-840
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               253
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               43, 57
               

               Conread position:
               422-840
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               254
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               38, 42
               

               Conread position:
               423-828
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               269
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               134, 49
               

               Conread position:
               427-802
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               62, 34
               

               Conread position:
               430-823
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               303, 68
               

               Conread position:
               446-796
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               15, 26
               

               Conread position:
               446-797
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               15, 26
               

               Conread position:
               492-837
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               12, 74
               

               Conread position:
               494-797
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               153, 139
               

               Conread position:
               496-797
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               8, 88
               

               Conread position:
               496-840
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               223, 230
               

               Conread position:
               496-840
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               236, 248
               

               Conread position:
               497-767
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               7, 87
               

               Conread position:
               497-791
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               7, 86
               

               Conread position:
               497-797
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               7, 78
               

               Conread position:
               497-800
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               7, 70
               

               Conread position:
               497-801
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               7, 243
               

               Conread position:
               497-825
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 78
               

               Conread position:
               497-837
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               225
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               60, 74
               

               Conread position:
               503-791
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               50, 71
               

               Conread position:
               503-796
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               54, 47
               

               Conread position:
               503-797
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               70, 80
               

               Conread position:
               503-799
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               148, 133
               

               Conread position:
               503-800
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               71, 47
               

               Conread position:
               503-840
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               239, 247
               

               Conread position:
               503-840
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               61, 67
               

               Conread position:
               504-715
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               504-796
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               238, 243
               

               Conread position:
               504-797
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               238, 247
               

               Conread position:
               504-797
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               209, 238
               

               Conread position:
               504-840
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               54, 43
               

               Conread position:
               508-796
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               234, 243
               

               Conread position:
               508-797
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               225, 231
               

               Conread position:
               508-801
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               141, 125
               

               Conread position:
               509-797
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               224, 234
               

               Conread position:
               510-840
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               137, 121
               

               Conread position:
               514-808
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               215, 202
               

               Conread position:
               522-803
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               74, 47
               

               Conread position:
               522-838
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               210, 222
               

               Conread position:
               554-829
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               170, 15
               

               Conread position:
               582-824
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               160, 169
               
Show alignments to all cow chromosomes.