Cow genome map

Conread name: Ss1.1-rcki016_h19.5

Conread position: 128-246
Cow position: chr25:23415297-23415415 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 91
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 351-784
Cow position: chr25:36800895-36801328 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 263
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 31, 131

Conread position: 374-778
Cow position: chr25:33157183-33156783 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 254
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 89, 122

Conread position: 379-797
Cow position: chr25:33127761-33128176 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 250
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 103, 82

Conread position: 379-798
Cow position: chr25:33299110-33299526 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 264
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 106, 117

Conread position: 380-799
Cow position: chr25:36800591-36801007 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 259
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 50, 29

Conread position: 383-715
Cow position: chr25:18642208-18641876 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 214
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 106, 113

Conread position: 383-797
Cow position: chr25:33157426-33157015 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 257
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 98, 113

Conread position: 384-798
Cow position: chr25:33298611-33299022 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 251
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 24, 32

Conread position: 388-797
Cow position: chr25:34714086-34714492 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 248
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 116, 91

Conread position: 390-796
Cow position: chr25:23420437-23420840 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 256
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 91, 106

Conread position: 390-797
Cow position: chr25:34769650-34769246 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 254
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 342, 105

Conread position: 390-823
Cow position: chr25:34769734-34769304 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 270
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 111, 95

Conread position: 390-840
Cow position: chr25:34769902-34769455 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 105

Conread position: 391-796
Cow position: chr25:34770069-34769667 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 263
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 90, 105

Conread position: 401-791
Cow position: chr25:36801527-36801911 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 244
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 84, 16

Conread position: 404-715
Cow position: chr25:23420535-23420843 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 200
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 59, 66

Conread position: 415-840
Cow position: chr25:34769793-34769371 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 271
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 71, 81

Conread position: 416-796
Cow position: chr25:33298474-33298852 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 244
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 8, 64

Conread position: 418-800
Cow position: chr25:33299233-33299612 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 240
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 120, 64

Conread position: 418-800
Cow position: chr25:36801373-36801752 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 235
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 138, 70

Conread position: 480-769
Cow position: chr25:22235885-22236175 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 183
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 43, 272

Conread position: 493-824
Cow position: chr25:36801361-36801692 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 206
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 82

Conread position: 497-796
Cow position: chr25:33157148-33156848 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 194
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 87

Conread position: 497-797
Cow position: chr25:33127791-33128092 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 204
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 7, 69

Conread position: 500-798
Cow position: chr25:33305408-33305112 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 187
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 242, 7

Conread position: 503-839
Cow position: chr25:34447522-34447851 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 213
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 63, 71

Conread position: 504-713
Cow position: chr25:36801708-36801917 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 35

Conread position: 504-765
Cow position: chr25:327004-327265 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 177
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 67

Conread position: 504-769
Cow position: chr25:34447439-34447704 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 167
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 218, 212

Conread position: 504-784
Cow position: chr25:33157224-33156944 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 191
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 70, 79

Conread position: 504-797
Cow position: chr25:23420464-23420757 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 193
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 238, 243

Conread position: 504-798
Cow position: chr25:33299484-33299778 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 191
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 220, 211

Conread position: 504-800
Cow position: chr25:33298812-33299108 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 183
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 237, 243

Conread position: 504-800
Cow position: chr25:36800880-36801176 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 185
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 237, 243

Conread position: 508-791
Cow position: chr25:346449-346732 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 174
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 508-797
Cow position: chr25:34770124-34769834 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 191
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 75

Conread position: 510-750
Cow position: chr25:33145185-33145424 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 232, 0

Conread position: 510-781
Cow position: chr25:33305316-33305049 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 175
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 128, 115

Conread position: 510-799
Cow position: chr25:33298986-33299275 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 187
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 29, 44

Conread position: 510-800
Cow position: chr25:36801546-36801836 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 190
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 214, 205

Conread position: 513-797
Cow position: chr25:33157467-33157183 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 186
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 37

Conread position: 513-840
Cow position: chr25:33145104-33145431 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 205
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 58

Conread position: 581-797
Cow position: chr25:33127708-33127924 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 143
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 161, 170

Show alignments to all cow chromosomes.