Cow genome map
| Conread name: | Ss1.1-rcki016_h19.5 |
| Conread position: | 140-256 |
| Cow position: | chr28:7735933-7736049 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 90 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 351-715 |
| Cow position: | chr28:9253199-9253563 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 232 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 24, 133 |
| Conread position: | 356-798 |
| Cow position: | chr28:7757517-7757959 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 289 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 19, 56 |
| Conread position: | 390-779 |
| Cow position: | chr28:7810561-7810947 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 17, 26 |
| Conread position: | 418-796 |
| Cow position: | chr28:9253185-9253560 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 62, 76 |
| Conread position: | 418-797 |
| Cow position: | chr28:7757750-7758126 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 242 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 50, 42 |
| Conread position: | 418-798 |
| Cow position: | chr28:7757918-7758295 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 240 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 68, 77 |
| Conread position: | 418-837 |
| Cow position: | chr28:9253101-9253517 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 270 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 43, 59 |
| Conread position: | 423-828 |
| Cow position: | chr28:7810351-7810744 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 251 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 63, 73 |
| Conread position: | 496-796 |
| Cow position: | chr28:7757405-7757705 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 77, 85 |
| Conread position: | 500-824 |
| Cow position: | chr28:7757912-7758237 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 5, 55 |
| Conread position: | 503-796 |
| Cow position: | chr28:9299217-9299510 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 145, 149 |
| Conread position: | 504-775 |
| Cow position: | chr28:7758489-7758760 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 147, 121 |
| Conread position: | 504-798 |
| Cow position: | chr28:7757497-7757791 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 216, 206 |
| Conread position: | 504-798 |
| Cow position: | chr28:9253016-9253310 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 140, 127 |
| Conread position: | 504-798 |
| Cow position: | chr28:9290416-9290709 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 218, 46 |
| Conread position: | 504-815 |
| Cow position: | chr28:9290169-9290474 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 117, 41 |
| Conread position: | 508-800 |
| Cow position: | chr28:7758409-7758701 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 53, 66 |
| Conread position: | 509-798 |
| Cow position: | chr28:9252937-9253226 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 233, 238 |
| Conread position: | 510-837 |
| Cow position: | chr28:7757587-7757914 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 125, 115 |
| Conread position: | 528-776 |
| Cow position: | chr28:7810285-7810533 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 118, 99 |
| Conread position: | 591-836 |
| Cow position: | chr28:9299221-9299466 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 39, 64 |
Show alignments to all cow chromosomes.