Cow genome map
| Conread name: | Ss1.1-rcki016_h19.5 |
| Conread position: | 351-837 |
| Cow position: | chr3:62722061-62721575 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 295 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 25, 124 |
| Conread position: | 375-784 |
| Cow position: | chr3:62722118-62721712 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 259 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 88, 100 |
| Conread position: | 390-725 |
| Cow position: | chr3:68045991-68046323 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 56, 74 |
| Conread position: | 390-791 |
| Cow position: | chr3:68027062-68027460 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 45, 37 |
| Conread position: | 390-796 |
| Cow position: | chr3:68045655-68046058 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 45, 37 |
| Conread position: | 390-824 |
| Cow position: | chr3:62722271-62721840 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 278 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 73, 80 |
| Conread position: | 403-796 |
| Cow position: | chr3:68045752-68046142 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 251 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 78, 91 |
| Conread position: | 404-797 |
| Cow position: | chr3:68045921-68046311 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 150, 68 |
| Conread position: | 408-797 |
| Cow position: | chr3:62722335-62721951 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 334, 11 |
| Conread position: | 417-778 |
| Cow position: | chr3:62742527-62742880 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 69, 59 |
| Conread position: | 417-796 |
| Cow position: | chr3:68045598-68045974 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 257 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 43, 57 |
| Conread position: | 496-837 |
| Cow position: | chr3:68045926-68046267 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 51, 65 |
| Conread position: | 503-792 |
| Cow position: | chr3:77350916-77350630 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 232, 220 |
| Conread position: | 503-796 |
| Cow position: | chr3:62742691-62742983 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 193, 60 |
| Conread position: | 510-776 |
| Cow position: | chr3:68027011-68027277 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 32, 51 |
| Conread position: | 510-797 |
| Cow position: | chr3:68027431-68027718 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 225, 216 |
| Conread position: | 569-711 |
| Cow position: | chr3:16020401-16020259 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 593-840 |
| Cow position: | chr3:68027010-68027257 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 149, 158 |
Show alignments to all cow chromosomes.