Cow genome map


           Conread name:
           Ss1.1-rcki016_h19.5
        

               Conread position:
               126-319
               

               Cow position:
               chr4:42316367-42316175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               128-256
               

               Cow position:
               chr4:42301064-42301191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               428-797
               

               Cow position:
               chr4:42315280-42314914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               73, 63
               

               Conread position:
               497-797
               

               Cow position:
               chr4:42314795-42314495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               7, 156
               

               Conread position:
               503-838
               

               Cow position:
               chr4:42314622-42314287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               56, 260
               

               Conread position:
               508-712
               

               Cow position:
               chr4:42313862-42313662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               509-825
               

               Cow position:
               chr4:42314279-42313963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               206
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               510-796
               

               Cow position:
               chr4:42315285-42314999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               55, 61
               

               Conread position:
               511-836
               

               Cow position:
               chr4:42314948-42314623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               135, 122
               

               Conread position:
               516-824
               

               Cow position:
               chr4:42315361-42315055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               132, 74
               
Show alignments to all cow chromosomes.