Cow genome map


           Conread name:
           Ss1.1-rcli18b_i7.5.5
        

               Conread position:
               35-702
               

               Cow position:
               
               

               Alignm length:
               670
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 60
               

               Conread position:
               35-702
               

               Cow position:
               
               

               Alignm length:
               673
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               479, 81
               

               Conread position:
               35-702
               

               Cow position:
               
               

               Alignm length:
               670
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 64
               

               Conread position:
               35-702
               

               Cow position:
               
               

               Alignm length:
               668
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               35-702
               

               Cow position:
               
               

               Alignm length:
               670
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 60
               

               Conread position:
               35-709
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 81
               

               Conread position:
               65-707
               

               Cow position:
               
               

               Alignm length:
               653
               

               Alignm identity:
               391
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               87, 44
               

               Conread position:
               203-485
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               13, 110
               

               Conread position:
               214-709
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               316
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               276, 58
               

               Conread position:
               219-702
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 43
               

               Conread position:
               220-707
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 36
               

               Conread position:
               222-702
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               350, 341
               

               Conread position:
               701-911
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               701-976
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               701-976
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               701-976
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               701-976
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 107
               

               Conread position:
               701-976
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               975-1129
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               975-1130
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               975-1130
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               975-1130
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               975-1133
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               975-1135
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               134, 140
               

               Conread position:
               980-1130
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1125-1310
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               149
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               1125-1310
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               70, 50
               

               Conread position:
               1125-1310
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               146
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1125-1310
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               1125-1373
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               198
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1125-1494
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 204
               

               Conread position:
               1226-1494
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               1370-1493
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               44, 121
               

               Conread position:
               1370-1493
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               44, 121
               
Show alignments to all cow chromosomes.