Cow genome map
| Conread name: | Ss1.1-rcly31b_o16.5.5 |
| Conread position: | 116-426 |
| Cow position: | chr23:5390923-5391234 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 214 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 35, 13 |
| Conread position: | 149-426 |
| Cow position: | chr23:21242338-21242615 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-395 |
| Cow position: | chr23:22932416-22932663 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 152-392 |
| Cow position: | chr23:5464298-5464058 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 154-426 |
| Cow position: | chr23:5449022-5448750 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 239 |
| Conread position: | 160-426 |
| Cow position: | chr23:21283956-21284225 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 425-682 |
| Cow position: | chr23:5613378-5613123 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 425-707 |
| Cow position: | chr23:5398918-5399200 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 28 |
| Conread position: | 425-707 |
| Cow position: | chr23:21267646-21267921 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 36, 28 |
| Conread position: | 425-707 |
| Cow position: | chr23:22907851-22908130 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 28 |
| Conread position: | 425-709 |
| Cow position: | chr23:5446517-5446233 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 425-725 |
| Cow position: | chr23:21244785-21245086 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 28 |
| Conread position: | 425-725 |
| Cow position: | chr23:22934736-22935037 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 28 |
| Conread position: | 425-725 |
| Cow position: | chr23:22957043-22957344 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 213 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 36, 28 |
| Conread position: | 465-707 |
| Cow position: | chr23:5463540-5463298 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 709-802 |
| Cow position: | chr23:5445688-5445595 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 81 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 709-820 |
| Cow position: | chr23:21245812-21245923 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 709-821 |
| Cow position: | chr23:21268654-21268766 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 711-820 |
| Cow position: | chr23:22936840-22936949 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.