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Cow genome map

           
Conread name:
           
Ss1.1-rcmu23_o12.5
        

               
Conread position:
               
1-96
               

               
Cow position:
               
chr13:48038476-48038381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-105
               

               
Cow position:
               
chr13:606660-606764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-105
               

               
Cow position:
               
chr13:9734295-9734191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-105
               

               
Cow position:
               
chr13:11821666-11821562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-109
               

               
Cow position:
               
chr13:6539818-6539926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-109
               

               
Cow position:
               
chr13:9570367-9570259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-109
               

               
Cow position:
               
chr13:22780339-22780231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-117
               

               
Cow position:
               
chr13:43974317-43974201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-119
               

               
Cow position:
               
chr13:2558160-2558278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-119
               

               
Cow position:
               
chr13:2800525-2800643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-119
               

               
Cow position:
               
chr13:7465456-7465338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-124
               

               
Cow position:
               
chr13:9002098-9001975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-128
               

               
Cow position:
               
chr13:6141371-6141498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-129
               

               
Cow position:
               
chr13:17612947-17612821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
1-132
               

               
Cow position:
               
chr13:32980600-32980469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-134
               

               
Cow position:
               
chr13:58313974-58314107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr13:3822448-3822311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr13:5608295-5608159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr13:13222672-13222536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-138
               

               
Cow position:
               
chr13:5621754-5621617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-144
               

               
Cow position:
               
chr13:18908387-18908245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
110, 91
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr13:11148112-11147968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr13:4420660-4420513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr13:5229576-5229430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr13:5078635-5078799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr13:8651907-8652075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
100, 7
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr13:11254014-11253850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
130, 79
               

               
Conread position:
               
1-168
               

               
Cow position:
               
chr13:40989428-40989262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr13:17439223-17439393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr13:46428469-46428643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
100, 162
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr13:34904862-34904694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr13:22980615-22980441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr13:1458832-1458656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
139, 148
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr13:4477764-4477941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr13:12940903-12940727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr13:47317915-47317739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
139, 148
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr13:59169906-59169732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
139, 73
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr13:1570815-1570639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr13:28653181-28652996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
178, 135
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr13:34190863-34191059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr13:21135382-21135579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
178, 145
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr13:56526972-56527171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr13:28570187-28569980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr13:42085157-42084961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr13:30926111-30925906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr13:32921397-32921192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
150, 137
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr13:9900654-9900446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr13:51901962-51901755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 0
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr13:185854-185647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
178, 121
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr13:26079798-26079589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
139, 86
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr13:20777204-20776989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
178, 147
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr13:26073279-26073069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
175, 90
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr13:33160666-33160881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
133, 141
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr13:37558652-37558434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
33, 128
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr13:12616105-12615885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 88
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr13:2186288-2186500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
153, 39
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr13:39827085-39826873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr13:25413028-25412797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr13:48628176-48628401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
178, 92
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr13:31607798-31607558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr13:32733550-32733303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
150, 137
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr13:7504607-7504851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
178, 86
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr13:32793699-32793451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
178, 141
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr13:51483852-51484102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr13:19279682-19279411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
40, 149
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr13:22790266-22790013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
116, 180
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr13:661287-661539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
175, 61
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr13:2466084-2466339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
175, 249
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr13:7366095-7366351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
140, 129
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr13:16128165-16127912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
178, 69
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr13:24373755-24373496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr13:3356460-3356720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr13:4024224-4023959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
138, 204
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr13:9302025-9302284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 98
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr13:15280929-15281189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr13:17787005-17787256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
178, 207
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr13:33332699-33332445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
179, 207
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr13:33500034-33499777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
178, 210
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr13:49977311-49977571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr13:5938874-5939133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
126, 142
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr13:3015820-3016079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
179, 100
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr13:11290466-11290730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
99, 215
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr13:4615647-4615914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
139, 148
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr13:16808223-16808492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr13:12233108-12233372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
130, 99
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr13:12244667-12244933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
33, 17
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr13:1368362-1368099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
62, 138
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr13:15591784-15592048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 45
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr13:52010236-52010500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 129
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr13:8202540-8202803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
178, 26
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr13:33352023-33352283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
195, 91
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr13:51856288-51856563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 46
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr13:24695713-24695443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
178, 27
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr13:14215354-14215080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
117, 92
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr13:42086494-42086218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr13:30307055-30307331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 211
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr13:6552824-6552544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
94, 87
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr13:48629338-48629068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 75
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr13:609492-609773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
139, 148
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr13:11795060-11794777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 148
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr13:13516899-13516618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
150, 126
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr13:995719-996005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 148
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr13:1590512-1590228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
179, 105
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr13:3993474-3993188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr13:4945040-4945326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr13:5028749-5029035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr13:5041145-5041424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
179, 237
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr13:8301196-8301482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr13:9049223-9049503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 208
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr13:9537876-9538153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
179, 31
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr13:13330187-13330467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
178, 71
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr13:13904043-13904329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
178, 129
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr13:14033936-14033650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr13:14743332-14743606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
248, 96
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr13:14816004-14815718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr13:23682400-23682677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
187, 125
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr13:30468477-30468192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 92
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr13:33467061-33467348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr13:34037916-34037631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 147
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr13:42214495-42214211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
178, 147
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr13:45934265-45934551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr13:54063005-54063284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
178, 92
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr13:55371811-55372097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr13:60879553-60879831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
232, 168
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr13:20527342-20527057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
116, 86
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr13:1636351-1636072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
130, 175
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr13:20440251-20440522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
99, 147
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr13:35525864-35526148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
130, 193
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr13:52057888-52057608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
138, 86
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr13:60436528-60436824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 221
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr13:47007389-47007671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 91
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr13:58465530-58465231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
141, 202
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr13:1170817-1170524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 32
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr13:6361289-6361588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr13:6945723-6945423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr13:12990988-12990689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr13:23456743-23457042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
96, 148
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr13:38283634-38283930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 225
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr13:41608025-41608312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
253, 86
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr13:52019649-52019350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr13:32151911-32151620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 18
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr13:1011682-1011379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr13:1844777-1845080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
105, 125
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr13:20820488-20820783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 132
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr13:37947665-37947950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 120
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr13:42839189-42839487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 147
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr13:34345943-34346247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
150, 137
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr13:61976615-61976917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 148
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr13:6749223-6748923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
37, 81
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr13:40657444-40657751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
37, 95
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr13:3970280-3970590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
150, 141
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr13:8609202-8609504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
109, 19
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr13:9350372-9350060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
105, 139
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr13:12990195-12989888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
160, 121
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr13:14544461-14544162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 74
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr13:15872799-15872491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 233
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr13:16292891-16292586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 32
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr13:16344053-16343731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
67, 177
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr13:18329484-18329171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
117, 272
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr13:18534084-18534393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 0
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr13:27018964-27018657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
178, 159
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr13:28413647-28413340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 129
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr13:30651525-30651222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 208
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr13:33162859-33163169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 269
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr13:35761217-35761524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
179, 90
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr13:60447743-60448054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 280
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr13:30504806-30504498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
178, 122
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr13:50079102-50078793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
178, 207
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr13:43119658-43119346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
150, 118
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr13:12875634-12875932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 192
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr13:560747-560428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
175, 303
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr13:645565-645884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
178, 303
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr13:1346524-1346204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 304
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr13:24931180-24930860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
150, 137
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr13:52433281-52433596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
178, 207
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr13:52637631-52637321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
181, 98
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr13:54975455-54975774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
178, 303
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr13:32949656-32949975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 88
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr13:7663081-7663395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 7
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr13:4553145-4552829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
256, 18
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr13:9974716-9975051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
92, 123
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr13:46182123-46181816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
197, 60
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr13:47313246-47312946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
261, 32
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr13:6606670-6607000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 183
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr13:21708531-21708208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 209
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr13:1767119-1766792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
92, 126
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr13:12546555-12546890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 13
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr13:18835536-18835213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 203
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr13:49805318-49804992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 114
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr13:24767762-24767404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
109, 288
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr13:34941307-34941632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 137
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr13:37516787-37517119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 27
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr13:51941079-51940754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 135
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr13:2414374-2414045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
96, 59
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr13:10988724-10989059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 137
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr13:16015165-16014830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 189
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr13:17158514-17158858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr13:61170374-61170704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 104
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr13:15162321-15162636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
261, 18
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr13:21276206-21275873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 211
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr13:20683773-20684111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 137
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr13:54237687-54237364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
110, 47
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr13:152293-151968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 121
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr13:60690369-60690719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 122
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr13:311782-311434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 250
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr13:15869467-15869129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 91
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr13:28683704-28683369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 79
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr13:21235342-21235682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 27
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr13:61547653-61547988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
103, 70
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr13:9803407-9803072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
269, 130
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr13:34263032-34263364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
196, 57
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:34670199-34669849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
152, 178
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr13:38329982-38329624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 61
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr13:8635930-8635576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 269
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr13:42860223-42860580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 94
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr13:971546-971909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 209
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr13:12670107-12670462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 69
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr13:57493834-57494201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 129
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr13:1042606-1042982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 336
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr13:11820927-11820589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 118
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr13:12044991-12045351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 114
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr13:18215780-18215431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 188
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr13:19882689-19883050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 86
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr13:20879487-20879837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 101
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr13:22085410-22085759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 86
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr13:25062765-25062400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 146
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr13:31814215-31813863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 80
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr13:34052252-34052602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 129
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr13:37946628-37946969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
251, 86
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr13:46324439-46324802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 85
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr13:53535954-53536321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
76, 7
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr13:60974415-60974062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 40
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr13:6835460-6835808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
98, 25
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr13:6616398-6616770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 318
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr13:15958967-15958604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 59
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr13:19178623-19178256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 96
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr13:31808862-31808503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 230
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr13:15536843-15536473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 207
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr13:15538346-15537976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 207
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr13:19639077-19639451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 137
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr13:26203818-26203453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
178, 280
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr13:20175089-20174730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 180
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr13:30799072-30798703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 181
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr13:34728490-34728866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 92
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr13:60508773-60509139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 74
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr13:1155358-1155724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 215
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr13:17855722-17855352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 75
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr13:20605769-20606137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 215
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr13:34282030-34281653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 252
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr13:34375605-34375239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 133
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr13:51528097-51528466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 42
               

               
Conread position:
               
1-377
               

               
Cow position:
               
chr13:9907086-9906712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
180, 90
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr13:6974515-6974137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 206
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr13:12407934-12408313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 129
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr13:25248794-25249182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 145
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr13:25695418-25695792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 215
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr13:38562294-38561916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 144
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr13:40652283-40651910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 272
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr13:50690042-50690421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 334
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr13:25434779-25435148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 175
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr13:44278702-44278326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
178, 59
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr13:19229551-19229168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
178, 306
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr13:6869940-6870321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
178, 207
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr13:20377992-20378370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 61
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr13:3003794-3003398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 86
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr13:37945870-37946237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 120
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr13:12977909-12977529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 86
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr13:19426348-19426765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
261, 203
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr13:17800424-17799964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 65
               

               
Conread position:
               
2-106
               

               
Cow position:
               
chr13:30694354-30694250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-119
               

               
Cow position:
               
chr13:14302345-14302228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-123
               

               
Cow position:
               
chr13:46606138-46606259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-127
               

               
Cow position:
               
chr13:20597150-20597272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
2-128
               

               
Cow position:
               
chr13:28550016-28550142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-134
               

               
Cow position:
               
chr13:42853790-42853927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
2-138
               

               
Cow position:
               
chr13:23617792-23617929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
2-139
               

               
Cow position:
               
chr13:8010230-8010367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-147
               

               
Cow position:
               
chr13:6740119-6739971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
2-168
               

               
Cow position:
               
chr13:31823014-31822848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
155, 135
               

               
Conread position:
               
2-177
               

               
Cow position:
               
chr13:6919199-6919023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
28, 94
               

               
Conread position:
               
2-177
               

               
Cow position:
               
chr13:14589871-14589696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-185
               

               
Cow position:
               
chr13:41901884-41901703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
46, 77
               

               
Conread position:
               
2-197
               

               
Cow position:
               
chr13:32978362-32978170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 83
               

               
Conread position:
               
2-201
               

               
Cow position:
               
chr13:49575987-49575786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
173, 26
               

               
Conread position:
               
2-202
               

               
Cow position:
               
chr13:6343521-6343725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chr13:34882348-34882137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr13:706575-706776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
149, 174
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr13:5671219-5671415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr13:20243393-20243593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
177, 94
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr13:25892151-25892354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
150, 91
               

               
Conread position:
               
2-208
               

               
Cow position:
               
chr13:54071773-54071568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
174, 86
               

               
Conread position:
               
2-216
               

               
Cow position:
               
chr13:46105241-46105460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
2-216
               

               
Cow position:
               
chr13:53310365-53310583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
2-218
               

               
Cow position:
               
chr13:45455734-45455954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-225
               

               
Cow position:
               
chr13:32826058-32826285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
180, 0
               

               
Conread position:
               
2-227
               

               
Cow position:
               
chr13:19565066-19564838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
177, 146
               

               
Conread position:
               
2-233
               

               
Cow position:
               
chr13:6054725-6054491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
177, 136
               

               
Conread position:
               
2-233
               

               
Cow position:
               
chr13:33620830-33621071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
143, 10
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr13:47509783-47510020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-245
               

               
Cow position:
               
chr13:3353642-3353890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
177, 205
               

               
Conread position:
               
2-245
               

               
Cow position:
               
chr13:3480096-3479846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
106, 95
               

               
Conread position:
               
2-246
               

               
Cow position:
               
chr13:33049169-33048928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
83, 56
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr13:18054898-18055150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-251
               

               
Cow position:
               
chr13:3166014-3166268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-251
               

               
Cow position:
               
chr13:31756976-31756728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
177, 84
               

               
Conread position:
               
2-251
               

               
Cow position:
               
chr13:50188973-50188718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-251
               

               
Cow position:
               
chr13:52077475-52077735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
2-252
               

               
Cow position:
               
chr13:7010818-7010564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-253
               

               
Cow position:
               
chr13:9692898-9692654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
2-253
               

               
Cow position:
               
chr13:18197321-18197070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
150, 12
               

               
Conread position:
               
2-253
               

               
Cow position:
               
chr13:24285901-24285657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
174, 22
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr13:511542-511270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
101, 34
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr13:62018741-62018998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
99, 214
               

               
Conread position:
               
2-255
               

               
Cow position:
               
chr13:6317114-6316860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
177, 119
               

               
Conread position:
               
2-255
               

               
Cow position:
               
chr13:32803332-32803075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
174, 80
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr13:3319851-3320115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr13:6716393-6716134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr13:20472617-20472358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr13:21729463-21729204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
149, 136
               

               
Conread position:
               
2-262
               

               
Cow position:
               
chr13:11834134-11834385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
96, 130
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr13:491731-491465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
177, 205
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr13:3710199-3709933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
177, 205
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr13:11486678-11486944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
177, 205
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr13:13776603-13776869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
177, 205
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr13:14551489-14551223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
177, 205
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr13:16922519-16922785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
177, 205
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr13:20327316-20327581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
174, 206
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr13:26161131-26161397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr13:28130384-28130118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr13:37122577-37122843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr13:38574501-38574235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr13:47023057-47022791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr13:52090724-52090992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr13:53531183-53531449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr13:2955492-2955758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-265
               

               
Cow position:
               
chr13:31990522-31990790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr13:50618623-50618353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
177, 268
               

               
Conread position:
               
2-273
               

               
Cow position:
               
chr13:43911312-43911588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr13:7403047-7403323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr13:34021719-34021442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr13:33522318-33522040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
177, 27
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr13:3692968-3693253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr13:4035484-4035209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
247, 167
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr13:27416984-27416699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr13:34871822-34872106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
177, 42
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr13:35541043-35541328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr13:36701488-36701773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr13:40926963-40926678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr13:42249727-42250012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr13:43628774-43629059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr13:44189959-44190244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr13:49612448-49612163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr13:50189431-50189146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr13:50440186-50439901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr13:52316841-52316556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr13:62027747-62028030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr13:4665697-4665994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
177, 205
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr13:51297846-51297549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr13:681693-681996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr13:4963868-4964165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 134
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr13:12389737-12389443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
177, 104
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr13:27475517-27475219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr13:32524223-32523926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr13:46055516-46055218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr13:50284552-50284255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
177, 107
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr13:53156742-53156444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr13:53208314-53208612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr13:57786374-57786672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr13:42215477-42215176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr13:6650912-6651208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
99, 145
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr13:6086552-6086853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 128
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr13:13126088-13125778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 136
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr13:26382881-26383196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr13:39952065-39952373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
180, 108
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr13:8782750-8783059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
177, 41
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr13:36673310-36673620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
177, 302
               

               
Conread position:
               
2-313
               

               
Cow position:
               
chr13:1568647-1568333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 287
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr13:670881-671201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
177, 304
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr13:5498163-5497847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 300
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr13:8172756-8172437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
119, 303
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr13:8690483-8690165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
177, 302
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr13:18121232-18120914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
177, 302
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr13:32081518-32081836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
177, 206
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr13:43106874-43106556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 302
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr13:60645945-60645628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 301
               

               
Conread position:
               
2-326
               

               
Cow position:
               
chr13:53566933-53566618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
180, 54
               

               
Conread position:
               
2-344
               

               
Cow position:
               
chr13:17613695-17613348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 214
               

               
Conread position:
               
2-344
               

               
Cow position:
               
chr13:18351192-18350844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
74, 194
               

               
Conread position:
               
2-364
               

               
Cow position:
               
chr13:41807115-41806761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 54
               

               
Conread position:
               
2-364
               

               
Cow position:
               
chr13:56686780-56686420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 194
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr13:21175974-21176335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 78
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr13:23269864-23270222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 209
               

               
Conread position:
               
2-371
               

               
Cow position:
               
chr13:2725165-2724794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
149, 136
               

               
Conread position:
               
2-382
               

               
Cow position:
               
chr13:4736084-4736463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
174, 324
               

               
Conread position:
               
2-382
               

               
Cow position:
               
chr13:7869922-7869533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
138, 343
               

               
Conread position:
               
2-382
               

               
Cow position:
               
chr13:11267003-11267384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
177, 302
               

               
Conread position:
               
2-382
               

               
Cow position:
               
chr13:13220602-13220982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
177, 124
               

               
Conread position:
               
2-382
               

               
Cow position:
               
chr13:13762333-13762714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 302
               

               
Conread position:
               
2-382
               

               
Cow position:
               
chr13:19102035-19101652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
177, 283
               

               
Conread position:
               
2-382
               

               
Cow position:
               
chr13:34212387-34212768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
177, 302
               

               
Conread position:
               
2-382
               

               
Cow position:
               
chr13:43892463-43892840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
177, 119
               

               
Conread position:
               
2-382
               

               
Cow position:
               
chr13:49446398-49446779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
177, 334
               

               
Conread position:
               
2-382
               

               
Cow position:
               
chr13:55338382-55338763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
177, 302
               

               
Conread position:
               
2-382
               

               
Cow position:
               
chr13:57407318-57406935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
177, 302
               

               
Conread position:
               
3-104
               

               
Cow position:
               
chr13:15622207-15622106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-138
               

               
Cow position:
               
chr13:13803170-13803306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
3-177
               

               
Cow position:
               
chr13:38612853-38613019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
148, 74
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:24729296-24729092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
179, 150
               

               
Conread position:
               
3-239
               

               
Cow position:
               
chr13:2475817-2476053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr13:32166954-32167208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
95, 151
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr13:3162845-3162587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
177, 126
               

               
Conread position:
               
3-277
               

               
Cow position:
               
chr13:21231155-21231432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
148, 135
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr13:20561447-20561171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
246, 104
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr13:30794168-30793885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 86
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr13:43151455-43151172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
176, 0
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr13:52276066-52276350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
3-289
               

               
Cow position:
               
chr13:47547943-47548227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
132, 106
               

               
Conread position:
               
3-306
               

               
Cow position:
               
chr13:32550384-32550693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 218
               

               
Conread position:
               
3-307
               

               
Cow position:
               
chr13:18567167-18567476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr13:5752078-5752417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 58
               

               
Conread position:
               
3-358
               

               
Cow position:
               
chr13:32754893-32755246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
150, 26
               

               
Conread position:
               
4-177
               

               
Cow position:
               
chr13:2137579-2137408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
128, 96
               

               
Conread position:
               
4-263
               

               
Cow position:
               
chr13:15657179-15657443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
4-282
               

               
Cow position:
               
chr13:6664484-6664201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
4-306
               

               
Cow position:
               
chr13:36396821-36397128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
4-327
               

               
Cow position:
               
chr13:32017176-32017505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 126
               

               
Conread position:
               
4-378
               

               
Cow position:
               
chr13:52894474-52894124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
184, 70
               

               
Conread position:
               
5-105
               

               
Cow position:
               
chr13:2114085-2113985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-115
               

               
Cow position:
               
chr13:18002940-18003049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
5-117
               

               
Cow position:
               
chr13:19022593-19022481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-119
               

               
Cow position:
               
chr13:5278627-5278741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-134
               

               
Cow position:
               
chr13:27836034-27836158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
5-138
               

               
Cow position:
               
chr13:54053269-54053402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-166
               

               
Cow position:
               
chr13:12618745-12618904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
96, 48
               

               
Conread position:
               
5-171
               

               
Cow position:
               
chr13:36346334-36346172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
5-177
               

               
Cow position:
               
chr13:62169198-62169367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
86, 94
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr13:20635151-20635352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
5-203
               

               
Cow position:
               
chr13:20088203-20088401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
174, 24
               

               
Conread position:
               
5-205
               

               
Cow position:
               
chr13:3143584-3143383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
177, 130
               

               
Conread position:
               
5-212
               

               
Cow position:
               
chr13:46099242-46099034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
171, 31
               

               
Conread position:
               
5-221
               

               
Cow position:
               
chr13:21126730-21126951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
51, 85
               

               
Conread position:
               
5-233
               

               
Cow position:
               
chr13:36264310-36264082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 206
               

               
Conread position:
               
5-237
               

               
Cow position:
               
chr13:41412185-41411953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
174, 136
               

               
Conread position:
               
5-239
               

               
Cow position:
               
chr13:21986951-21987189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
5-253
               

               
Cow position:
               
chr13:10755260-10755013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
174, 106
               

               
Conread position:
               
5-253
               

               
Cow position:
               
chr13:15580198-15579945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
175, 131
               

               
Conread position:
               
5-253
               

               
Cow position:
               
chr13:38897910-38898153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
147, 86
               

               
Conread position:
               
5-254
               

               
Cow position:
               
chr13:4441884-4441637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
49, 96
               

               
Conread position:
               
5-268
               

               
Cow position:
               
chr13:39950174-39950429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
191, 72
               

               
Conread position:
               
5-269
               

               
Cow position:
               
chr13:25882880-25883143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
174, 136
               

               
Conread position:
               
5-273
               

               
Cow position:
               
chr13:21988759-21989028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 82
               

               
Conread position:
               
5-283
               

               
Cow position:
               
chr13:56154817-56155091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
43, 82
               

               
Conread position:
               
5-306
               

               
Cow position:
               
chr13:31511725-31512031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
174, 88
               

               
Conread position:
               
5-326
               

               
Cow position:
               
chr13:32717526-32717851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
123, 36
               

               
Conread position:
               
5-327
               

               
Cow position:
               
chr13:34556002-34556315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
32, 87
               

               
Conread position:
               
5-331
               

               
Cow position:
               
chr13:41253972-41253639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
16, 24
               

               
Conread position:
               
5-339
               

               
Cow position:
               
chr13:15446388-15446050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 41
               

               
Conread position:
               
5-339
               

               
Cow position:
               
chr13:59687523-59687871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
104, 32
               

               
Conread position:
               
5-364
               

               
Cow position:
               
chr13:13261361-13260989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 254
               

               
Conread position:
               
5-364
               

               
Cow position:
               
chr13:17820915-17821281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 45
               

               
Conread position:
               
5-366
               

               
Cow position:
               
chr13:1231997-1231633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 144
               

               
Conread position:
               
5-366
               

               
Cow position:
               
chr13:10928647-10929006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
126, 82
               

               
Conread position:
               
5-366
               

               
Cow position:
               
chr13:15288586-15288938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 61
               

               
Conread position:
               
5-367
               

               
Cow position:
               
chr13:41918820-41919173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 119
               

               
Conread position:
               
5-373
               

               
Cow position:
               
chr13:58043974-58043608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 125
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr13:25531444-25531816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 123
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr13:45353375-45353007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
174, 40
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr13:52284255-52283888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 209
               

               
Conread position:
               
5-382
               

               
Cow position:
               
chr13:47215907-47216285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 124
               

               
Conread position:
               
5-466
               

               
Cow position:
               
chr13:15167162-15166690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
177, 89
               

               
Conread position:
               
5-468
               

               
Cow position:
               
chr13:16270282-16269803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 270
               

               
Conread position:
               
6-204
               

               
Cow position:
               
chr13:36716988-36717185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
173, 19
               

               
Conread position:
               
6-206
               

               
Cow position:
               
chr13:6839787-6839986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
155, 132
               

               
Conread position:
               
6-213
               

               
Cow position:
               
chr13:62151758-62151967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
173, 202
               

               
Conread position:
               
6-215
               

               
Cow position:
               
chr13:8960923-8960717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
167, 6
               

               
Conread position:
               
6-253
               

               
Cow position:
               
chr13:15957151-15956898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
50, 17
               

               
Conread position:
               
7-119
               

               
Cow position:
               
chr13:23669511-23669399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-254
               

               
Cow position:
               
chr13:17270313-17270053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
94, 75
               

               
Conread position:
               
7-327
               

               
Cow position:
               
chr13:2774462-2774148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 80
               

               
Conread position:
               
7-366
               

               
Cow position:
               
chr13:21107475-21107126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
5, 148
               

               
Conread position:
               
8-101
               

               
Cow position:
               
chr13:24156212-24156119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
94
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
8-138
               

               
Cow position:
               
chr13:17567646-17567773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
8-167
               

               
Cow position:
               
chr13:28139889-28139732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
94, 115
               

               
Conread position:
               
8-205
               

               
Cow position:
               
chr13:1637060-1637261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
8-205
               

               
Cow position:
               
chr13:5910376-5910573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
174, 50
               

               
Conread position:
               
8-208
               

               
Cow position:
               
chr13:54286426-54286625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
5, 96
               

               
Conread position:
               
8-219
               

               
Cow position:
               
chr13:27241262-27241051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
169, 61
               

               
Conread position:
               
8-237
               

               
Cow position:
               
chr13:32870305-32870078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
144, 58
               

               
Conread position:
               
8-239
               

               
Cow position:
               
chr13:2789617-2789846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
173, 24
               

               
Conread position:
               
8-243
               

               
Cow position:
               
chr13:62517857-62518099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
103, 139
               

               
Conread position:
               
8-246
               

               
Cow position:
               
chr13:33218536-33218306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
168, 84
               

               
Conread position:
               
8-254
               

               
Cow position:
               
chr13:25453513-25453263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
8-263
               

               
Cow position:
               
chr13:16092149-16091889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
8-266
               

               
Cow position:
               
chr13:47590798-47591060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
160, 128
               

               
Conread position:
               
8-277
               

               
Cow position:
               
chr13:42277247-42277513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
98, 43
               

               
Conread position:
               
8-283
               

               
Cow position:
               
chr13:23444468-23444742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
172, 89
               

               
Conread position:
               
8-284
               

               
Cow position:
               
chr13:26098485-26098216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 128
               

               
Conread position:
               
8-289
               

               
Cow position:
               
chr13:3649146-3648861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
172, 245
               

               
Conread position:
               
8-295
               

               
Cow position:
               
chr13:33907106-33906805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
95, 142
               

               
Conread position:
               
8-295
               

               
Cow position:
               
chr13:50192778-50192487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
171, 45
               

               
Conread position:
               
8-306
               

               
Cow position:
               
chr13:33876005-33875711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 203
               

               
Conread position:
               
8-308
               

               
Cow position:
               
chr13:21402452-21402752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
171, 258
               

               
Conread position:
               
8-331
               

               
Cow position:
               
chr13:8838655-8838971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
171, 29
               

               
Conread position:
               
8-344
               

               
Cow position:
               
chr13:5175910-5175568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
235, 72
               

               
Conread position:
               
8-366
               

               
Cow position:
               
chr13:8362403-8362763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 301
               

               
Conread position:
               
8-366
               

               
Cow position:
               
chr13:42229662-42229296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
173, 98
               

               
Conread position:
               
8-366
               

               
Cow position:
               
chr13:60429738-60430091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 34
               

               
Conread position:
               
8-367
               

               
Cow position:
               
chr13:20863675-20864030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 125
               

               
Conread position:
               
8-371
               

               
Cow position:
               
chr13:11390905-11391266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
124, 152
               

               
Conread position:
               
8-380
               

               
Cow position:
               
chr13:61954887-61955263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 233
               

               
Conread position:
               
9-166
               

               
Cow position:
               
chr13:54864721-54864875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
9-176
               

               
Cow position:
               
chr13:13283804-13283644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
9-216
               

               
Cow position:
               
chr13:33976013-33975814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
9-250
               

               
Cow position:
               
chr13:12480449-12480697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
56, 37
               

               
Conread position:
               
9-251
               

               
Cow position:
               
chr13:8136227-8136476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
87, 76
               

               
Conread position:
               
9-295
               

               
Cow position:
               
chr13:14716995-14717280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
114, 138
               

               
Conread position:
               
9-306
               

               
Cow position:
               
chr13:45355620-45355323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
61, 101
               

               
Conread position:
               
9-322
               

               
Cow position:
               
chr13:21155149-21155468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 97
               

               
Conread position:
               
9-366
               

               
Cow position:
               
chr13:43762513-43762155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
92, 52
               

               
Conread position:
               
9-384
               

               
Cow position:
               
chr13:20893298-20893667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 198
               

               
Conread position:
               
9-387
               

               
Cow position:
               
chr13:562795-563176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 246
               

               
Conread position:
               
10-219
               

               
Cow position:
               
chr13:60156573-60156360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
169, 0
               

               
Conread position:
               
10-254
               

               
Cow position:
               
chr13:20537924-20537684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 0
               

               
Conread position:
               
10-254
               

               
Cow position:
               
chr13:39487006-39487249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
176, 77
               

               
Conread position:
               
10-298
               

               
Cow position:
               
chr13:52585684-52585969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 18
               

               
Conread position:
               
10-300
               

               
Cow position:
               
chr13:4038207-4037930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
167, 63
               

               
Conread position:
               
10-327
               

               
Cow position:
               
chr13:12448647-12448974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 122
               

               
Conread position:
               
10-366
               

               
Cow position:
               
chr13:16833749-16834088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
28, 16
               

               
Conread position:
               
10-384
               

               
Cow position:
               
chr13:36771081-36771454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 184
               

               
Conread position:
               
11-143
               

               
Cow position:
               
chr13:17597822-17597689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
83, 33
               

               
Conread position:
               
11-170
               

               
Cow position:
               
chr13:21282136-21282292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
142, 90
               

               
Conread position:
               
11-190
               

               
Cow position:
               
chr13:55255612-55255786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
153, 39
               

               
Conread position:
               
11-192
               

               
Cow position:
               
chr13:37636360-37636176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
170, 139
               

               
Conread position:
               
11-202
               

               
Cow position:
               
chr13:49257653-49257847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
44, 141
               

               
Conread position:
               
11-247
               

               
Cow position:
               
chr13:43384296-43384534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
168, 106
               

               
Conread position:
               
11-248
               

               
Cow position:
               
chr13:44389947-44390184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
168, 74
               

               
Conread position:
               
11-254
               

               
Cow position:
               
chr13:8899912-8899653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
11-255
               

               
Cow position:
               
chr13:47473273-47473027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
11, 132
               

               
Conread position:
               
11-263
               

               
Cow position:
               
chr13:11223431-11223176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
66, 133
               

               
Conread position:
               
11-265
               

               
Cow position:
               
chr13:36937356-36937610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
168, 214
               

               
Conread position:
               
11-266
               

               
Cow position:
               
chr13:1638546-1638795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
168, 39
               

               
Conread position:
               
11-330
               

               
Cow position:
               
chr13:34333612-34333920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
176, 125
               

               
Conread position:
               
11-338
               

               
Cow position:
               
chr13:6153439-6153773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 207
               

               
Conread position:
               
11-339
               

               
Cow position:
               
chr13:57027992-57028320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
138, 83
               

               
Conread position:
               
11-364
               

               
Cow position:
               
chr13:20666048-20666400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 127
               

               
Conread position:
               
11-367
               

               
Cow position:
               
chr13:889844-890185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 75
               

               
Conread position:
               
11-372
               

               
Cow position:
               
chr13:20571063-20570708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
171, 76
               

               
Conread position:
               
11-373
               

               
Cow position:
               
chr13:45604072-45604436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 271
               

               
Conread position:
               
11-382
               

               
Cow position:
               
chr13:19274917-19275292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
82, 9
               

               
Conread position:
               
12-142
               

               
Cow position:
               
chr13:20664087-20664221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
12-237
               

               
Cow position:
               
chr13:18836131-18836360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
168, 134
               

               
Conread position:
               
12-253
               

               
Cow position:
               
chr13:179163-179401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
78, 135
               

               
Conread position:
               
12-257
               

               
Cow position:
               
chr13:265484-265234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
12-265
               

               
Cow position:
               
chr13:21836654-21836396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
12-266
               

               
Cow position:
               
chr13:19218481-19218227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
53, 182
               

               
Conread position:
               
12-268
               

               
Cow position:
               
chr13:41360088-41359833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
102, 49
               

               
Conread position:
               
12-298
               

               
Cow position:
               
chr13:52922441-52922145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
86, 32
               

               
Conread position:
               
12-366
               

               
Cow position:
               
chr13:12682204-12682559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 84
               

               
Conread position:
               
12-380
               

               
Cow position:
               
chr13:13266140-13265780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 118
               

               
Conread position:
               
13-213
               

               
Cow position:
               
chr13:6189293-6189496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
98, 108
               

               
Conread position:
               
13-239
               

               
Cow position:
               
chr13:27737796-27738023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
166, 28
               

               
Conread position:
               
13-241
               

               
Cow position:
               
chr13:16953008-16952785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
167, 58
               

               
Conread position:
               
13-253
               

               
Cow position:
               
chr13:19396688-19396447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
119, 25
               

               
Conread position:
               
13-267
               

               
Cow position:
               
chr13:21009013-21008749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
13-269
               

               
Cow position:
               
chr13:13344294-13344035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
17, 203
               

               
Conread position:
               
13-276
               

               
Cow position:
               
chr13:15920811-15920544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
138, 75
               

               
Conread position:
               
13-307
               

               
Cow position:
               
chr13:27027439-27027730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
169, 62
               

               
Conread position:
               
13-362
               

               
Cow position:
               
chr13:37483932-37484288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 240
               

               
Conread position:
               
14-233
               

               
Cow position:
               
chr13:11774406-11774625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
165, 73
               

               
Conread position:
               
14-245
               

               
Cow position:
               
chr13:35008642-35008873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
162, 56
               

               
Conread position:
               
14-247
               

               
Cow position:
               
chr13:22076413-22076186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
162, 189
               

               
Conread position:
               
14-251
               

               
Cow position:
               
chr13:46516399-46516172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
14-262
               

               
Cow position:
               
chr13:48627079-48626839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
165, 75
               

               
Conread position:
               
14-277
               

               
Cow position:
               
chr13:28140203-28140471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
166, 90
               

               
Conread position:
               
14-297
               

               
Cow position:
               
chr13:34508213-34507922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 186
               

               
Conread position:
               
14-300
               

               
Cow position:
               
chr13:43138892-43139176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 128
               

               
Conread position:
               
14-366
               

               
Cow position:
               
chr13:3701769-3701425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 116
               

               
Conread position:
               
14-378
               

               
Cow position:
               
chr13:33517571-33517949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 184
               

               
Conread position:
               
15-144
               

               
Cow position:
               
chr13:20944941-20945070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
15-274
               

               
Cow position:
               
chr13:3557229-3557491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
164, 193
               

               
Conread position:
               
15-298
               

               
Cow position:
               
chr13:40943579-40943297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 115
               

               
Conread position:
               
16-367
               

               
Cow position:
               
chr13:42114352-42113999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 64
               

               
Conread position:
               
16-378
               

               
Cow position:
               
chr13:19138772-19138420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 165
               

               
Conread position:
               
17-200
               

               
Cow position:
               
chr13:16114584-16114401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
162, 104
               

               
Conread position:
               
17-210
               

               
Cow position:
               
chr13:25332483-25332681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
11, 191
               

               
Conread position:
               
17-242
               

               
Cow position:
               
chr13:41654393-41654622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
128, 66
               

               
Conread position:
               
17-262
               

               
Cow position:
               
chr13:6498927-6498682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
88, 119
               

               
Conread position:
               
17-362
               

               
Cow position:
               
chr13:37981418-37981755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 116
               

               
Conread position:
               
18-177
               

               
Cow position:
               
chr13:26822462-26822303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-378
               

               
Cow position:
               
chr13:37320585-37320946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
161, 286
               

               
Conread position:
               
19-163
               

               
Cow position:
               
chr13:5447834-5447692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
19-247
               

               
Cow position:
               
chr13:24547401-24547178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
171, 46
               

               
Conread position:
               
19-254
               

               
Cow position:
               
chr13:18963320-18963082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
161, 48
               

               
Conread position:
               
19-316
               

               
Cow position:
               
chr13:8473306-8473006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
160, 5
               

               
Conread position:
               
19-330
               

               
Cow position:
               
chr13:26479885-26480195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 72
               

               
Conread position:
               
19-337
               

               
Cow position:
               
chr13:17622616-17622295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 233
               

               
Conread position:
               
19-344
               

               
Cow position:
               
chr13:17886824-17886512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
114, 19
               

               
Conread position:
               
20-204
               

               
Cow position:
               
chr13:62135806-62135617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
20-282
               

               
Cow position:
               
chr13:10754890-10754620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
120, 198
               

               
Conread position:
               
20-283
               

               
Cow position:
               
chr13:13321111-13320856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
102, 153
               

               
Conread position:
               
20-296
               

               
Cow position:
               
chr13:46525110-46525391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
26, 77
               

               
Conread position:
               
20-366
               

               
Cow position:
               
chr13:37980320-37980658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 101
               

               
Conread position:
               
20-381
               

               
Cow position:
               
chr13:3861784-3861422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
21-282
               

               
Cow position:
               
chr13:12395354-12395088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
21-319
               

               
Cow position:
               
chr13:38485148-38484864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
161, 32
               

               
Conread position:
               
21-323
               

               
Cow position:
               
chr13:24754213-24753907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 12
               

               
Conread position:
               
21-372
               

               
Cow position:
               
chr13:20563327-20562974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 12
               

               
Conread position:
               
21-382
               

               
Cow position:
               
chr13:4208488-4208846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
158, 67
               

               
Conread position:
               
22-219
               

               
Cow position:
               
chr13:62480211-62480411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
75, 47
               

               
Conread position:
               
22-366
               

               
Cow position:
               
chr13:16247976-16247644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
240, 48
               

               
Conread position:
               
23-253
               

               
Cow position:
               
chr13:20834529-20834759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
173, 150
               

               
Conread position:
               
24-232
               

               
Cow position:
               
chr13:1000879-1000671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
127, 114
               

               
Conread position:
               
24-282
               

               
Cow position:
               
chr13:18268165-18268428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
24-282
               

               
Cow position:
               
chr13:57482980-57483243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
24-295
               

               
Cow position:
               
chr13:40813456-40813180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
24-360
               

               
Cow position:
               
chr13:49283015-49283361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
77, 119
               

               
Conread position:
               
25-295
               

               
Cow position:
               
chr13:5867886-5868159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
161, 105
               

               
Conread position:
               
25-373
               

               
Cow position:
               
chr13:21039277-21039623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
68, 74
               

               
Conread position:
               
28-243
               

               
Cow position:
               
chr13:22570860-22570641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
112, 122
               

               
Conread position:
               
28-254
               

               
Cow position:
               
chr13:11571010-11570781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
151, 102
               

               
Conread position:
               
28-267
               

               
Cow position:
               
chr13:21524748-21524509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 113
               

               
Conread position:
               
28-294
               

               
Cow position:
               
chr13:35533145-35532889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
153, 16
               

               
Conread position:
               
28-361
               

               
Cow position:
               
chr13:15172086-15172422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 74
               

               
Conread position:
               
28-363
               

               
Cow position:
               
chr13:5091339-5091680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 42
               

               
Conread position:
               
29-202
               

               
Cow position:
               
chr13:3400651-3400828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
29-241
               

               
Cow position:
               
chr13:28558556-28558340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
29-295
               

               
Cow position:
               
chr13:3144667-3144396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
29-298
               

               
Cow position:
               
chr13:57323777-57323507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
89, 35
               

               
Conread position:
               
29-305
               

               
Cow position:
               
chr13:2884372-2884095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 64
               

               
Conread position:
               
31-311
               

               
Cow position:
               
chr13:56148860-56148573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
69, 107
               

               
Conread position:
               
31-311
               

               
Cow position:
               
chr13:56160107-56160394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
69, 107
               

               
Conread position:
               
32-366
               

               
Cow position:
               
chr13:20649663-20649999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 24
               

               
Conread position:
               
33-263
               

               
Cow position:
               
chr13:34932564-34932799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
33-306
               

               
Cow position:
               
chr13:17291816-17292088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
149, 54
               

               
Conread position:
               
33-306
               

               
Cow position:
               
chr13:27524944-27525220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 103
               

               
Conread position:
               
34-252
               

               
Cow position:
               
chr13:29819921-29820144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
34-255
               

               
Cow position:
               
chr13:9125990-9125766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
142, 136
               

               
Conread position:
               
34-266
               

               
Cow position:
               
chr13:35853035-35853265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
146, 68
               

               
Conread position:
               
34-297
               

               
Cow position:
               
chr13:44202306-44202046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
143, 174
               

               
Conread position:
               
34-336
               

               
Cow position:
               
chr13:36948853-36949162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
145, 232
               

               
Conread position:
               
34-364
               

               
Cow position:
               
chr13:13089344-13089014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
16, 100
               

               
Conread position:
               
34-378
               

               
Cow position:
               
chr13:20683263-20682925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 145
               

               
Conread position:
               
35-275
               

               
Cow position:
               
chr13:22195919-22195679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
144, 190
               

               
Conread position:
               
35-371
               

               
Cow position:
               
chr13:5119076-5119414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
144, 302
               

               
Conread position:
               
37-142
               

               
Cow position:
               
chr13:38643812-38643915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
37-254
               

               
Cow position:
               
chr13:20270907-20271117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
145, 48
               

               
Conread position:
               
37-282
               

               
Cow position:
               
chr13:36537648-36537898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
37-306
               

               
Cow position:
               
chr13:47073826-47074101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
143, 233
               

               
Conread position:
               
37-331
               

               
Cow position:
               
chr13:37382125-37381818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 155
               

               
Conread position:
               
37-372
               

               
Cow position:
               
chr13:7415724-7416060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
95, 175
               

               
Conread position:
               
38-253
               

               
Cow position:
               
chr13:55843797-55843581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
115, 174
               

               
Conread position:
               
38-254
               

               
Cow position:
               
chr13:19119310-19119095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
144, 44
               

               
Conread position:
               
38-373
               

               
Cow position:
               
chr13:34035681-34035346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 275
               

               
Conread position:
               
39-323
               

               
Cow position:
               
chr13:25261480-25261784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
49, 207
               

               
Conread position:
               
40-316
               

               
Cow position:
               
chr13:39912336-39912615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
111, 8
               

               
Conread position:
               
41-241
               

               
Cow position:
               
chr13:1639675-1639879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
41-261
               

               
Cow position:
               
chr13:8779702-8779485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
141, 15
               

               
Conread position:
               
41-306
               

               
Cow position:
               
chr13:20813973-20814236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
138, 50
               

               
Conread position:
               
41-306
               

               
Cow position:
               
chr13:20816620-20816357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
138, 50
               

               
Conread position:
               
41-336
               

               
Cow position:
               
chr13:52178408-52178121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
136, 144
               

               
Conread position:
               
41-373
               

               
Cow position:
               
chr13:13306412-13306072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
123, 20
               

               
Conread position:
               
43-216
               

               
Cow position:
               
chr13:47599672-47599499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
136, 28
               

               
Conread position:
               
43-263
               

               
Cow position:
               
chr13:3994234-3994459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
43-282
               

               
Cow position:
               
chr13:39202995-39203239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
44-202
               

               
Cow position:
               
chr13:45515647-45515809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
44-298
               

               
Cow position:
               
chr13:51332162-51331907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
107, 165
               

               
Conread position:
               
44-306
               

               
Cow position:
               
chr13:17977641-17977385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
52, 99
               

               
Conread position:
               
45-247
               

               
Cow position:
               
chr13:25641806-25642011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
141, 87
               

               
Conread position:
               
45-253
               

               
Cow position:
               
chr13:48378266-48378479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
45-307
               

               
Cow position:
               
chr13:14927543-14927279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 66
               

               
Conread position:
               
46-200
               

               
Cow position:
               
chr13:56505340-56505498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
47-325
               

               
Cow position:
               
chr13:15740367-15740087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
132, 44
               

               
Conread position:
               
47-379
               

               
Cow position:
               
chr13:32283423-32283102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
135, 26
               

               
Conread position:
               
48-282
               

               
Cow position:
               
chr13:23460334-23460571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
131, 164
               

               
Conread position:
               
49-238
               

               
Cow position:
               
chr13:54080502-54080695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
83, 98
               

               
Conread position:
               
49-283
               

               
Cow position:
               
chr13:9142584-9142358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
215, 81
               

               
Conread position:
               
49-297
               

               
Cow position:
               
chr13:34113229-34113480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
130, 37
               

               
Conread position:
               
50-373
               

               
Cow position:
               
chr13:47756675-47756349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
82, 49
               

               
Conread position:
               
50-376
               

               
Cow position:
               
chr13:43194473-43194153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
129, 56
               

               
Conread position:
               
51-366
               

               
Cow position:
               
chr13:25817813-25817513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
145, 140
               

               
Conread position:
               
52-306
               

               
Cow position:
               
chr13:17994232-17993974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
41, 157
               

               
Conread position:
               
53-252
               

               
Cow position:
               
chr13:45496965-45497160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
123, 156
               

               
Conread position:
               
53-306
               

               
Cow position:
               
chr13:23199506-23199248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
133, 214
               

               
Conread position:
               
53-308
               

               
Cow position:
               
chr13:37698343-37698084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
126, 251
               

               
Conread position:
               
56-177
               

               
Cow position:
               
chr13:34673862-34673741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
57-297
               

               
Cow position:
               
chr13:17807115-17806870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
58-306
               

               
Cow position:
               
chr13:51821595-51821845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
85, 41
               

               
Conread position:
               
58-382
               

               
Cow position:
               
chr13:60377115-60377439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
121, 231
               

               
Conread position:
               
59-253
               

               
Cow position:
               
chr13:12521492-12521680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
110, 71
               

               
Conread position:
               
59-282
               

               
Cow position:
               
chr13:20781033-20781260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
92, 26
               

               
Conread position:
               
60-260
               

               
Cow position:
               
chr13:18989996-18989798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
60-263
               

               
Cow position:
               
chr13:32255835-32256042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
61-283
               

               
Cow position:
               
chr13:8824556-8824337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
48, 131
               

               
Conread position:
               
61-306
               

               
Cow position:
               
chr13:33191206-33190956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
62-245
               

               
Cow position:
               
chr13:19512302-19512485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
118, 126
               

               
Conread position:
               
62-282
               

               
Cow position:
               
chr13:15276428-15276203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
62-283
               

               
Cow position:
               
chr13:8265763-8265537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
69, 147
               

               
Conread position:
               
63-372
               

               
Cow position:
               
chr13:21194233-21194527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
186, 28
               

               
Conread position:
               
64-347
               

               
Cow position:
               
chr13:6759503-6759794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
116, 95
               

               
Conread position:
               
65-277
               

               
Cow position:
               
chr13:13116379-13116167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
152, 26
               

               
Conread position:
               
66-254
               

               
Cow position:
               
chr13:37497474-37497655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
113, 23
               

               
Conread position:
               
67-254
               

               
Cow position:
               
chr13:26983901-26983715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
33, 22
               

               
Conread position:
               
69-378
               

               
Cow position:
               
chr13:60967046-60966735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
182, 112
               

               
Conread position:
               
71-173
               

               
Cow position:
               
chr13:23266009-23265907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
71-279
               

               
Cow position:
               
chr13:12574914-12574705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
127, 111
               

               
Conread position:
               
71-293
               

               
Cow position:
               
chr13:12605974-12606196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
108, 50
               

               
Conread position:
               
71-306
               

               
Cow position:
               
chr13:17568406-17568645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
109, 22
               

               
Conread position:
               
71-364
               

               
Cow position:
               
chr13:18852352-18852067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
111, 20
               

               
Conread position:
               
72-282
               

               
Cow position:
               
chr13:61047485-61047272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
109, 89
               

               
Conread position:
               
72-295
               

               
Cow position:
               
chr13:32559154-32558926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
107, 198
               

               
Conread position:
               
72-316
               

               
Cow position:
               
chr13:38089774-38090020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
107, 136
               

               
Conread position:
               
72-381
               

               
Cow position:
               
chr13:12780774-12780464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
107, 232
               

               
Conread position:
               
73-251
               

               
Cow position:
               
chr13:18475430-18475609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
106, 25
               

               
Conread position:
               
73-263
               

               
Cow position:
               
chr13:7835094-7834899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
73-282
               

               
Cow position:
               
chr13:51484474-51484688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
73-306
               

               
Cow position:
               
chr13:3716264-3716026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
78, 65
               

               
Conread position:
               
73-371
               

               
Cow position:
               
chr13:7257679-7257378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
109, 153
               

               
Conread position:
               
74-327
               

               
Cow position:
               
chr13:33256773-33256522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
108, 137
               

               
Conread position:
               
74-382
               

               
Cow position:
               
chr13:1341080-1341389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
105, 262
               

               
Conread position:
               
74-382
               

               
Cow position:
               
chr13:16007501-16007190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
105, 230
               

               
Conread position:
               
77-306
               

               
Cow position:
               
chr13:24539766-24539536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
102, 21
               

               
Conread position:
               
77-325
               

               
Cow position:
               
chr13:6079145-6079396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
104, 124
               

               
Conread position:
               
77-358
               

               
Cow position:
               
chr13:9119838-9120119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
102, 131
               

               
Conread position:
               
77-366
               

               
Cow position:
               
chr13:45726153-45725882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
185, 53
               

               
Conread position:
               
77-382
               

               
Cow position:
               
chr13:4531220-4530914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
102, 227
               

               
Conread position:
               
80-307
               

               
Cow position:
               
chr13:38277866-38278091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
116, 102
               

               
Conread position:
               
80-366
               

               
Cow position:
               
chr13:18167001-18166719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
102, 131
               

               
Conread position:
               
80-366
               

               
Cow position:
               
chr13:40722439-40722720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
115, 68
               

               
Conread position:
               
81-269
               

               
Cow position:
               
chr13:36352699-36352883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
8, 51
               

               
Conread position:
               
82-313
               

               
Cow position:
               
chr13:52097892-52097661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
99, 129
               

               
Conread position:
               
82-331
               

               
Cow position:
               
chr13:18244124-18243878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
167, 16
               

               
Conread position:
               
83-261
               

               
Cow position:
               
chr13:46329196-46329376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
48, 68
               

               
Conread position:
               
84-247
               

               
Cow position:
               
chr13:14576933-14576774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
114, 46
               

               
Conread position:
               
84-307
               

               
Cow position:
               
chr13:55295359-55295579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
178, 45
               

               
Conread position:
               
84-366
               

               
Cow position:
               
chr13:19023572-19023861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
81, 248
               

               
Conread position:
               
85-322
               

               
Cow position:
               
chr13:46311768-46311998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
14, 67
               

               
Conread position:
               
85-324
               

               
Cow position:
               
chr13:15041206-15041449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
85-364
               

               
Cow position:
               
chr13:54702456-54702175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
94, 63
               

               
Conread position:
               
87-407
               

               
Cow position:
               
chr13:24376752-24376440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
95, 5
               

               
Conread position:
               
89-291
               

               
Cow position:
               
chr13:15234172-15233974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
93, 47
               

               
Conread position:
               
89-346
               

               
Cow position:
               
chr13:22115967-22115707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 50
               

               
Conread position:
               
89-366
               

               
Cow position:
               
chr13:17021458-17021742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
90, 169
               

               
Conread position:
               
89-366
               

               
Cow position:
               
chr13:19393547-19393278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
90, 23
               

               
Conread position:
               
89-378
               

               
Cow position:
               
chr13:24155804-24155505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
19, 50
               

               
Conread position:
               
90-320
               

               
Cow position:
               
chr13:54381674-54381909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
89, 47
               

               
Conread position:
               
90-364
               

               
Cow position:
               
chr13:21287829-21288096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
89, 126
               

               
Conread position:
               
91-344
               

               
Cow position:
               
chr13:39948159-39948410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
91-378
               

               
Cow position:
               
chr13:57002999-57002702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
38, 129
               

               
Conread position:
               
93-327
               

               
Cow position:
               
chr13:11061243-11061005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
5, 31
               

               
Conread position:
               
93-380
               

               
Cow position:
               
chr13:17970776-17971057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
5, 45
               

               
Conread position:
               
97-269
               

               
Cow position:
               
chr13:8195335-8195161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
100, 12
               

               
Conread position:
               
97-366
               

               
Cow position:
               
chr13:20784842-20784577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
82, 111
               

               
Conread position:
               
97-373
               

               
Cow position:
               
chr13:37069601-37069325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
84, 12
               

               
Conread position:
               
98-274
               

               
Cow position:
               
chr13:2113938-2113758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
81, 128
               

               
Conread position:
               
98-295
               

               
Cow position:
               
chr13:21210115-21209916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
24, 18
               

               
Conread position:
               
98-327
               

               
Cow position:
               
chr13:26261541-26261778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
54, 49
               

               
Conread position:
               
98-331
               

               
Cow position:
               
chr13:1780088-1779844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
13, 115
               

               
Conread position:
               
98-365
               

               
Cow position:
               
chr13:48037873-48037608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
165, 93
               

               
Conread position:
               
98-366
               

               
Cow position:
               
chr13:45022955-45023225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
43, 30
               

               
Conread position:
               
99-295
               

               
Cow position:
               
chr13:30693953-30693761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
78, 108
               

               
Conread position:
               
99-306
               

               
Cow position:
               
chr13:19556004-19555803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
83, 112
               

               
Conread position:
               
99-306
               

               
Cow position:
               
chr13:52285067-52284853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
79, 38
               

               
Conread position:
               
99-323
               

               
Cow position:
               
chr13:48251740-48251961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
97, 92
               

               
Conread position:
               
99-323
               

               
Cow position:
               
chr13:52879664-52879437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
10, 39
               

               
Conread position:
               
99-324
               

               
Cow position:
               
chr13:21904911-21904687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
150, 31
               

               
Conread position:
               
99-326
               

               
Cow position:
               
chr13:3315421-3315656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
37, 143
               

               
Conread position:
               
99-331
               

               
Cow position:
               
chr13:4664609-4664849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
38, 49
               

               
Conread position:
               
99-331
               

               
Cow position:
               
chr13:5713546-5713317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
150, 108
               

               
Conread position:
               
99-345
               

               
Cow position:
               
chr13:29631104-29630860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
80, 46
               

               
Conread position:
               
99-366
               

               
Cow position:
               
chr13:23479281-23479017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
80, 94
               

               
Conread position:
               
99-366
               

               
Cow position:
               
chr13:23856469-23856197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
99-373
               

               
Cow position:
               
chr13:23166845-23167121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
99-380
               

               
Cow position:
               
chr13:34995074-34995353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 46
               

               
Conread position:
               
101-298
               

               
Cow position:
               
chr13:23960556-23960760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
60, 168
               

               
Conread position:
               
101-324
               

               
Cow position:
               
chr13:37985501-37985730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
81, 36
               

               
Conread position:
               
101-366
               

               
Cow position:
               
chr13:25927042-25926777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
81, 110
               

               
Conread position:
               
101-366
               

               
Cow position:
               
chr13:42200868-42200606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
81, 36
               

               
Conread position:
               
101-472
               

               
Cow position:
               
chr13:35660003-35659626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
78, 117
               

               
Conread position:
               
102-372
               

               
Cow position:
               
chr13:12614509-12614233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
118, 256
               

               
Conread position:
               
102-378
               

               
Cow position:
               
chr13:19364493-19364221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
79, 109
               

               
Conread position:
               
102-378
               

               
Cow position:
               
chr13:61166208-61166475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
34, 173
               

               
Conread position:
               
102-460
               

               
Cow position:
               
chr13:38012610-38012247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
80, 246
               

               
Conread position:
               
103-259
               

               
Cow position:
               
chr13:60221186-60221344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
69, 97
               

               
Conread position:
               
103-295
               

               
Cow position:
               
chr13:11460871-11460681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
55, 28
               

               
Conread position:
               
103-327
               

               
Cow position:
               
chr13:8201237-8201462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
36, 109
               

               
Conread position:
               
103-366
               

               
Cow position:
               
chr13:13501374-13501631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
79, 45
               

               
Conread position:
               
103-366
               

               
Cow position:
               
chr13:15884766-15885035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
76, 34
               

               
Conread position:
               
103-454
               

               
Cow position:
               
chr13:60487208-60487565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
76, 272
               

               
Conread position:
               
104-306
               

               
Cow position:
               
chr13:60599695-60599896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
75, 109
               

               
Conread position:
               
104-332
               

               
Cow position:
               
chr13:11096415-11096189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
92, 16
               

               
Conread position:
               
105-306
               

               
Cow position:
               
chr13:54345023-54344815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
105-306
               

               
Cow position:
               
chr13:54418478-54418274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
83, 76
               

               
Conread position:
               
106-291
               

               
Cow position:
               
chr13:21241847-21242032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
73, 106
               

               
Conread position:
               
106-366
               

               
Cow position:
               
chr13:5278943-5279206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
39, 102
               

               
Conread position:
               
106-481
               

               
Cow position:
               
chr13:54331264-54330879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
73, 110
               

               
Conread position:
               
107-306
               

               
Cow position:
               
chr13:12283079-12282879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 22
               

               
Conread position:
               
107-306
               

               
Cow position:
               
chr13:26697860-26698061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
75, 30
               

               
Conread position:
               
107-327
               

               
Cow position:
               
chr13:47863455-47863679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
51, 104
               

               
Conread position:
               
107-366
               

               
Cow position:
               
chr13:8524377-8524631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
30, 76
               

               
Conread position:
               
108-252
               

               
Cow position:
               
chr13:12926033-12925886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
74, 29
               

               
Conread position:
               
108-293
               

               
Cow position:
               
chr13:20705960-20706148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
71, 29
               

               
Conread position:
               
108-366
               

               
Cow position:
               
chr13:55673962-55674221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
74, 219
               

               
Conread position:
               
108-380
               

               
Cow position:
               
chr13:41154803-41155060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
145, 70
               

               
Conread position:
               
109-339
               

               
Cow position:
               
chr13:15974852-15974621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
89, 82
               

               
Conread position:
               
109-345
               

               
Cow position:
               
chr13:8607277-8607515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 129
               

               
Conread position:
               
109-366
               

               
Cow position:
               
chr13:7076498-7076242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
72, 103
               

               
Conread position:
               
109-366
               

               
Cow position:
               
chr13:15622049-15621796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
70, 57
               

               
Conread position:
               
109-367
               

               
Cow position:
               
chr13:17114138-17114393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
73, 57
               

               
Conread position:
               
111-332
               

               
Cow position:
               
chr13:44323143-44322920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
26, 98
               

               
Conread position:
               
111-366
               

               
Cow position:
               
chr13:13176889-13176637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
151, 67
               

               
Conread position:
               
111-366
               

               
Cow position:
               
chr13:20041717-20041983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
30, 105
               

               
Conread position:
               
113-363
               

               
Cow position:
               
chr13:24586285-24586032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
51, 142
               

               
Conread position:
               
113-366
               

               
Cow position:
               
chr13:6060770-6061021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
69, 24
               

               
Conread position:
               
114-364
               

               
Cow position:
               
chr13:43184635-43184886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
23, 87
               

               
Conread position:
               
115-306
               

               
Cow position:
               
chr13:17816007-17815813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
67, 107
               

               
Conread position:
               
115-364
               

               
Cow position:
               
chr13:55315953-55316202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
147, 134
               

               
Conread position:
               
116-306
               

               
Cow position:
               
chr13:18551683-18551489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
65, 95
               

               
Conread position:
               
117-364
               

               
Cow position:
               
chr13:24369819-24369570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
25, 146
               

               
Conread position:
               
119-339
               

               
Cow position:
               
chr13:54093972-54093753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
77, 72
               

               
Conread position:
               
120-307
               

               
Cow position:
               
chr13:11954883-11955065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
59, 21
               

               
Conread position:
               
120-365
               

               
Cow position:
               
chr13:9884999-9884755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
59, 131
               

               
Conread position:
               
122-366
               

               
Cow position:
               
chr13:43480290-43480044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 140
               

               
Conread position:
               
123-366
               

               
Cow position:
               
chr13:17745470-17745230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 78
               

               
Conread position:
               
124-366
               

               
Cow position:
               
chr13:17439539-17439784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
55, 129
               

               
Conread position:
               
126-306
               

               
Cow position:
               
chr13:33054170-33054350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
136, 166
               

               
Conread position:
               
126-372
               

               
Cow position:
               
chr13:15192669-15192907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
137, 65
               

               
Conread position:
               
127-366
               

               
Cow position:
               
chr13:4464231-4463995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
55, 148
               

               
Conread position:
               
127-377
               

               
Cow position:
               
chr13:57475190-57475441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
13, 86
               

               
Conread position:
               
128-373
               

               
Cow position:
               
chr13:7059698-7059442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
54, 227
               

               
Conread position:
               
130-379
               

               
Cow position:
               
chr13:12202586-12202338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
52, 86
               

               
Conread position:
               
131-327
               

               
Cow position:
               
chr13:13465570-13465759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
46, 76
               

               
Conread position:
               
131-378
               

               
Cow position:
               
chr13:10845813-10845572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 85
               

               
Conread position:
               
132-322
               

               
Cow position:
               
chr13:20839786-20839589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
47, 121
               

               
Conread position:
               
132-366
               

               
Cow position:
               
chr13:6975571-6975808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
47, 86
               

               
Conread position:
               
132-379
               

               
Cow position:
               
chr13:18172559-18172311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
50, 76
               

               
Conread position:
               
140-373
               

               
Cow position:
               
chr13:60341025-60340786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
41, 77
               

               
Conread position:
               
141-306
               

               
Cow position:
               
chr13:51014970-51015142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
38, 128
               

               
Conread position:
               
145-364
               

               
Cow position:
               
chr13:19022484-19022259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
37, 55
               

               
Conread position:
               
150-366
               

               
Cow position:
               
chr13:9593708-9593492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
112, 57
               

               
Conread position:
               
150-366
               

               
Cow position:
               
chr13:15281735-15281953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 190
               

               
Conread position:
               
150-366
               

               
Cow position:
               
chr13:37592737-37592959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 61
               

               
Conread position:
               
150-372
               

               
Cow position:
               
chr13:19223850-19223628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 103
               

               
Conread position:
               
151-366
               

               
Cow position:
               
chr13:15528828-15529047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
31, 115
               

               
Conread position:
               
157-369
               

               
Cow position:
               
chr13:8652243-8652458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
13, 55
               

               
Conread position:
               
162-373
               

               
Cow position:
               
chr13:14771650-14771432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 46
               

               
Conread position:
               
184-375
               

               
Cow position:
               
chr13:15110487-15110293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
77, 179
               

               
Conread position:
               
196-373
               

               
Cow position:
               
chr13:7790169-7789987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
109, 65
               
Show alignments to all cow chromosomes.