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Cow genome map

           
Conread name:
           
Ss1.1-rcmu23_o12.5
        

               
Conread position:
               
1-98
               

               
Cow position:
               
chr25:35048029-35047932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-105
               

               
Cow position:
               
chr25:18012991-18013095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-117
               

               
Cow position:
               
chr25:11895851-11895737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
1-119
               

               
Cow position:
               
chr25:2595622-2595740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-119
               

               
Cow position:
               
chr25:7032603-7032721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-119
               

               
Cow position:
               
chr25:11540746-11540864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-119
               

               
Cow position:
               
chr25:11826872-11826753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1-119
               

               
Cow position:
               
chr25:34508543-34508425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-119
               

               
Cow position:
               
chr25:41121642-41121760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-120
               

               
Cow position:
               
chr25:16841037-16840919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
1-120
               

               
Cow position:
               
chr25:18487109-18487228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-122
               

               
Cow position:
               
chr25:22712068-22712189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-125
               

               
Cow position:
               
chr25:9595949-9596070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
113, 86
               

               
Conread position:
               
1-128
               

               
Cow position:
               
chr25:6988204-6988077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-128
               

               
Cow position:
               
chr25:19570763-19570637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
1-130
               

               
Cow position:
               
chr25:14755784-14755657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
1-133
               

               
Cow position:
               
chr25:16316427-16316559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-135
               

               
Cow position:
               
chr25:14284135-14284001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr25:23913093-23912960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
1-138
               

               
Cow position:
               
chr25:13429491-13429354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
98, 11
               

               
Conread position:
               
1-138
               

               
Cow position:
               
chr25:32823997-32823861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr25:35077028-35076881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chr25:23325370-23325215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-162
               

               
Cow position:
               
chr25:2624277-2624436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr25:17553630-17553456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr25:11044276-11044451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr25:14720118-14720292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
110, 52
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr25:15005839-15006012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr25:16802076-16802253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
37, 132
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr25:34000318-34000489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr25:36124333-36124507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr25:21017839-21017664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
150, 137
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr25:17191497-17191319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr25:17992508-17992329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr25:30852407-30852591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
178, 129
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr25:6118207-6118005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
178, 42
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr25:10580455-10580243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr25:26791667-26791874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
136, 57
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr25:37687524-37687317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
175, 89
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr25:13325235-13325445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 108
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr25:4860814-4860596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr25:18271894-18272114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr25:26187898-26187681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
177, 207
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr25:18240786-18241009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr25:29336124-29336351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
93, 40
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr25:34156307-34156533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
178, 128
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr25:5604606-5604387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
150, 89
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr25:33687265-33687031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr25:27231972-27232204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
178, 42
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr25:12174854-12174629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
178, 66
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr25:16691138-16691395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
97, 17
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr25:17585300-17585051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
150, 76
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr25:4488369-4488608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
130, 78
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr25:26225404-26225162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr25:10748867-10748620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
175, 101
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr25:12176565-12176310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 129
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr25:17994659-17994405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr25:12235120-12234873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
175, 18
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr25:13720907-13720653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 149
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr25:20496173-20496421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
99, 57
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr25:8572237-8571977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
150, 137
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr25:24654536-24654280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
150, 137
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr25:26756106-26756366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr25:34502048-34501793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
136, 208
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr25:26911123-26910869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr25:35589708-35589973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr25:10012420-10012155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
78, 227
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr25:11830261-11830007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
178, 47
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr25:26881849-26882121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr25:37469411-37469672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
97, 131
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr25:24227707-24227434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
96, 162
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr25:11956460-11956730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
181, 125
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr25:26353129-26352860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
140, 105
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr25:3992423-3992698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 250
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr25:12208124-12208402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
150, 137
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr25:16409099-16408819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
150, 129
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr25:11056511-11056781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
16, 88
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr25:8231249-8230972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 137
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr25:13840483-13840203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
178, 13
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr25:14274074-14274354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 129
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr25:16560957-16560682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
187, 129
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr25:16738308-16738029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
177, 81
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr25:18181751-18182027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
178, 17
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr25:5271220-5271506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 0
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr25:17682142-17681863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
33, 138
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr25:41097560-41097267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
107, 178
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr25:4897730-4898013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
150, 208
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr25:12750530-12750240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr25:13787584-13787869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
150, 129
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr25:18323720-18323434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr25:23945881-23945596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
140, 112
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr25:25510528-25510811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
150, 91
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr25:26282663-26282941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
179, 98
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr25:28274810-28274534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
179, 129
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr25:28863508-28863794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
179, 269
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr25:29198963-29199244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
101, 130
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr25:35446579-35446852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
150, 110
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr25:36392330-36392045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
150, 42
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr25:41356164-41355878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr25:12359840-12360126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
178, 7
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr25:21209313-21209029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 91
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr25:25479999-25479701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
106, 133
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr25:6226685-6226968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
181, 50
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr25:18490708-18490998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 70
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr25:18448471-18448767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 100
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr25:33589770-33589470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr25:34121455-34121156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr25:35554307-35554615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr25:40388820-40388529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
101, 24
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr25:38439794-38440093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
59, 180
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr25:4548089-4547786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
65, 97
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr25:8482680-8482377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr25:24727152-24726851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 42
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr25:32191302-32191599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
88, 154
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr25:6891894-6891588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 198
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr25:18885847-18885544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
141, 163
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr25:20403086-20402774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 135
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr25:22412846-22412539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
130, 208
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr25:26757064-26757375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
79, 230
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr25:34659471-34659162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 167
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr25:35567253-35566943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
178, 269
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr25:35608093-35607784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
90, 50
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr25:36765662-36765360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 137
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr25:34013120-34012805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
150, 13
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr25:34343265-34342949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
179, 269
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr25:17598859-17598545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
12, 40
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr25:27593935-27594245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 10
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr25:26938623-26938270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
31, 71
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr25:33839021-33839344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 191
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr25:30319816-30319477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 0
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr25:14225163-14224831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
80, 130
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr25:394990-395326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
113, 85
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr25:5756324-5756667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
107, 187
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr25:10504703-10504365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
72, 45
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr25:24136810-24136461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
55, 149
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr25:18160946-18161270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
296, 43
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr25:23410298-23410651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
116, 85
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr25:21193310-21192935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 141
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr25:36779129-36779495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 128
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr25:2135997-2136355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
195, 58
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr25:4522184-4521841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 134
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr25:6464395-6464033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 71
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr25:7641815-7641454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 55
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr25:8120410-8120779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 129
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr25:11437169-11436811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 210
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr25:20069360-20069717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 27
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr25:20076132-20076493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
162, 17
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr25:35339968-35340326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 85
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr25:35347536-35347900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
96, 52
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr25:36761749-36762101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
195, 61
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr25:37594031-37594402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
110, 222
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr25:41107394-41107751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 68
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr25:7216455-7216829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 214
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr25:15319563-15319919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 7
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr25:28327461-28327082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
75, 133
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr25:16922161-16921796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 122
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr25:23407196-23406835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
92, 42
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr25:32609781-32609409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
178, 303
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr25:5514642-5515016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 85
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr25:5539055-5539424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 207
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr25:18564126-18564489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 131
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr25:27868444-27868806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
178, 61
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr25:18294682-18294311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 213
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr25:26087149-26087522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 58
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr25:33664263-33663902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
15, 49
               

               
Conread position:
               
1-377
               

               
Cow position:
               
chr25:6470583-6470208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 120
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr25:26654541-26654919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 40
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr25:6683427-6683053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 42
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr25:8576333-8576703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
97, 51
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr25:14791389-14791766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 86
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr25:20007754-20008141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
96, 207
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr25:12157516-12157898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 303
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr25:14555306-14555688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
178, 336
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr25:21121218-21121612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 339
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr25:23389639-23389253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 86
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr25:27621716-27622125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
101, 7
               

               
Conread position:
               
2-107
               

               
Cow position:
               
chr25:26456355-26456460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-113
               

               
Cow position:
               
chr25:14266893-14266782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-117
               

               
Cow position:
               
chr25:15452885-15452770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-127
               

               
Cow position:
               
chr25:15429040-15428915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-133
               

               
Cow position:
               
chr25:18023398-18023526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
121, 58
               

               
Conread position:
               
2-139
               

               
Cow position:
               
chr25:14118389-14118526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-144
               

               
Cow position:
               
chr25:9045165-9045307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-177
               

               
Cow position:
               
chr25:4161354-4161528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
2-177
               

               
Cow position:
               
chr25:20652338-20652163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-177
               

               
Cow position:
               
chr25:33901743-33901568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-178
               

               
Cow position:
               
chr25:29559654-29559830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chr25:24636500-24636308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
2-192
               

               
Cow position:
               
chr25:9943807-9943624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
157, 63
               

               
Conread position:
               
2-199
               

               
Cow position:
               
chr25:5031-5232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-202
               

               
Cow position:
               
chr25:10158381-10158585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chr25:5611447-5611655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
143, 150
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chr25:18610683-18610883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
174, 42
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr25:5405699-5405901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
180, 125
               

               
Conread position:
               
2-208
               

               
Cow position:
               
chr25:11970195-11969985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
174, 25
               

               
Conread position:
               
2-216
               

               
Cow position:
               
chr25:2453959-2453740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
170, 89
               

               
Conread position:
               
2-216
               

               
Cow position:
               
chr25:5461809-5462027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-224
               

               
Cow position:
               
chr25:16136790-16137015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
149, 128
               

               
Conread position:
               
2-227
               

               
Cow position:
               
chr25:4857858-4857629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr25:11294427-11294670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr25:12533460-12533217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
174, 80
               

               
Conread position:
               
2-243
               

               
Cow position:
               
chr25:14823111-14822872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
128, 57
               

               
Conread position:
               
2-247
               

               
Cow position:
               
chr25:14618109-14617864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
79, 145
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr25:13132401-13132649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
150, 54
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr25:26869794-26870048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
87, 92
               

               
Conread position:
               
2-251
               

               
Cow position:
               
chr25:14874215-14874457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
135, 50
               

               
Conread position:
               
2-252
               

               
Cow position:
               
chr25:4049669-4049915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
2-253
               

               
Cow position:
               
chr25:30817211-30817462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
10, 39
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr25:1096211-1096464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 201
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr25:12064003-12063748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
174, 212
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr25:35585886-35585634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
174, 144
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr25:36633348-36633096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
104, 44
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr25:7069160-7069419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr25:17993884-17993625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
177, 206
               

               
Conread position:
               
2-260
               

               
Cow position:
               
chr25:26407834-26408092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
177, 90
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr25:10896093-10895827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr25:22198221-22198487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
177, 205
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr25:26319380-26319646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr25:26940006-26940272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr25:35602066-35602332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
177, 205
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr25:35649472-35649738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
177, 205
               

               
Conread position:
               
2-266
               

               
Cow position:
               
chr25:17426892-17427161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-269
               

               
Cow position:
               
chr25:3167545-3167273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-269
               

               
Cow position:
               
chr25:41387875-41387616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
196, 91
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr25:19339447-19339723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
177, 209
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr25:14954391-14954113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
177, 168
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr25:17659191-17659476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr25:2511074-2510789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr25:5537014-5536729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr25:11097342-11097627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr25:12753277-12752998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
177, 47
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr25:12943391-12943106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr25:15412660-15412945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr25:17808143-17807858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr25:19586700-19586415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr25:23334646-23334931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr25:23601304-23601019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
177, 205
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr25:26682199-26682484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
149, 199
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr25:27076697-27076982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr25:27146071-27146361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
138, 210
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr25:29525228-29524943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr25:34672956-34672675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
149, 6
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr25:16067896-16068191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
177, 87
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr25:7608952-7609250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr25:7717579-7717875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr25:8655929-8656227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr25:11269564-11269271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 206
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr25:13067348-13067050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr25:19531019-19531317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr25:27143298-27142999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr25:34257622-34257920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr25:36127265-36126967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-306
               

               
Cow position:
               
chr25:20771699-20771390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
2-306
               

               
Cow position:
               
chr25:21024568-21024275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
177, 63
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr25:3140940-3141258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
177, 302
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr25:9414762-9415080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
177, 283
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr25:13955750-13955432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 291
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr25:13967030-13966712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 302
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr25:26618087-26618405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 302
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr25:27017358-27017040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
174, 268
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr25:34163922-34163610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
178, 98
               

               
Conread position:
               
2-331
               

               
Cow position:
               
chr25:13569533-13569204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 208
               

               
Conread position:
               
2-338
               

               
Cow position:
               
chr25:36746812-36746475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
118, 106
               

               
Conread position:
               
2-348
               

               
Cow position:
               
chr25:36554639-36554985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
177, 206
               

               
Conread position:
               
2-349
               

               
Cow position:
               
chr25:41366525-41366186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
177, 79
               

               
Conread position:
               
2-363
               

               
Cow position:
               
chr25:18721462-18721124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
96, 6
               

               
Conread position:
               
2-365
               

               
Cow position:
               
chr25:21950760-21951120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 206
               

               
Conread position:
               
2-371
               

               
Cow position:
               
chr25:13960701-13961069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
149, 104
               

               
Conread position:
               
2-372
               

               
Cow position:
               
chr25:380347-379976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
149, 136
               

               
Conread position:
               
2-372
               

               
Cow position:
               
chr25:3145480-3145846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 158
               

               
Conread position:
               
2-373
               

               
Cow position:
               
chr25:33959625-33959250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 60
               

               
Conread position:
               
2-379
               

               
Cow position:
               
chr25:6021604-6021976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
171, 124
               

               
Conread position:
               
2-380
               

               
Cow position:
               
chr25:5792168-5791791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
180, 51
               

               
Conread position:
               
2-380
               

               
Cow position:
               
chr25:36351378-36351757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
177, 146
               

               
Conread position:
               
2-382
               

               
Cow position:
               
chr25:8235606-8235225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
177, 302
               

               
Conread position:
               
2-382
               

               
Cow position:
               
chr25:12318205-12317825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
177, 302
               

               
Conread position:
               
2-382
               

               
Cow position:
               
chr25:15618335-15618716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
177, 302
               

               
Conread position:
               
2-382
               

               
Cow position:
               
chr25:18090556-18090938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
138, 149
               

               
Conread position:
               
2-382
               

               
Cow position:
               
chr25:19138933-19138552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
177, 334
               

               
Conread position:
               
2-382
               

               
Cow position:
               
chr25:28272949-28273330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
177, 302
               

               
Conread position:
               
2-382
               

               
Cow position:
               
chr25:29383693-29383313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
177, 302
               

               
Conread position:
               
2-382
               

               
Cow position:
               
chr25:33990030-33989649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 302
               

               
Conread position:
               
2-384
               

               
Cow position:
               
chr25:4401748-4401368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
371, 0
               

               
Conread position:
               
2-462
               

               
Cow position:
               
chr25:3689049-3689506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
177, 302
               

               
Conread position:
               
2-478
               

               
Cow position:
               
chr25:19912907-19912430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 206
               

               
Conread position:
               
2-481
               

               
Cow position:
               
chr25:25873353-25872858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr25:26896675-26896886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
178, 86
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr25:17119550-17119314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
189, 0
               

               
Conread position:
               
3-246
               

               
Cow position:
               
chr25:11051018-11051256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 127
               

               
Conread position:
               
3-247
               

               
Cow position:
               
chr25:16957522-16957279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
125, 30
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr25:6967135-6966856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
128, 10
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr25:12171100-12171375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
182, 84
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr25:39386196-39385915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
148, 135
               

               
Conread position:
               
3-295
               

               
Cow position:
               
chr25:9641979-9642283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
98, 131
               

               
Conread position:
               
3-366
               

               
Cow position:
               
chr25:11054565-11054900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
297, 65
               

               
Conread position:
               
3-378
               

               
Cow position:
               
chr25:20650902-20651283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
151, 30
               

               
Conread position:
               
4-138
               

               
Cow position:
               
chr25:18658541-18658674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
4-204
               

               
Cow position:
               
chr25:22277627-22277423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
4-245
               

               
Cow position:
               
chr25:32514206-32513961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
4-254
               

               
Cow position:
               
chr25:16688614-16688360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
4-269
               

               
Cow position:
               
chr25:10657401-10657119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
107, 226
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr25:26923485-26923762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr25:18044864-18044570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
175, 276
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr25:19924160-19924453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
175, 46
               

               
Conread position:
               
4-327
               

               
Cow position:
               
chr25:31733096-31732771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 52
               

               
Conread position:
               
5-119
               

               
Cow position:
               
chr25:18189736-18189622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-122
               

               
Cow position:
               
chr25:40906639-40906522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-143
               

               
Cow position:
               
chr25:32606877-32606739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 49
               

               
Conread position:
               
5-143
               

               
Cow position:
               
chr25:39313253-39313113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
11, 24
               

               
Conread position:
               
5-180
               

               
Cow position:
               
chr25:32278392-32278217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-181
               

               
Cow position:
               
chr25:21041458-21041634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
156, 53
               

               
Conread position:
               
5-202
               

               
Cow position:
               
chr25:7259185-7259387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
5-205
               

               
Cow position:
               
chr25:22730287-22730479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
177, 55
               

               
Conread position:
               
5-213
               

               
Cow position:
               
chr25:23013850-23014068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
93, 43
               

               
Conread position:
               
5-215
               

               
Cow position:
               
chr25:10367049-10366838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
171, 125
               

               
Conread position:
               
5-247
               

               
Cow position:
               
chr25:38569957-38569719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
177, 77
               

               
Conread position:
               
5-261
               

               
Cow position:
               
chr25:36871496-36871753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 233
               

               
Conread position:
               
5-299
               

               
Cow position:
               
chr25:10011082-10010788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 101
               

               
Conread position:
               
5-305
               

               
Cow position:
               
chr25:20060391-20060089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 82
               

               
Conread position:
               
5-306
               

               
Cow position:
               
chr25:12239499-12239209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
174, 42
               

               
Conread position:
               
5-311
               

               
Cow position:
               
chr25:26849411-26849098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 125
               

               
Conread position:
               
5-329
               

               
Cow position:
               
chr25:26111919-26112232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
246, 109
               

               
Conread position:
               
5-337
               

               
Cow position:
               
chr25:11662178-11661842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 89
               

               
Conread position:
               
5-364
               

               
Cow position:
               
chr25:7800773-7801135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 277
               

               
Conread position:
               
5-364
               

               
Cow position:
               
chr25:30279571-30279214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 234
               

               
Conread position:
               
5-366
               

               
Cow position:
               
chr25:787910-788260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 28
               

               
Conread position:
               
5-366
               

               
Cow position:
               
chr25:16866875-16867234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 52
               

               
Conread position:
               
5-366
               

               
Cow position:
               
chr25:17658252-17658607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 125
               

               
Conread position:
               
5-366
               

               
Cow position:
               
chr25:22314838-22315201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
177, 203
               

               
Conread position:
               
5-366
               

               
Cow position:
               
chr25:25827098-25827467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 129
               

               
Conread position:
               
5-372
               

               
Cow position:
               
chr25:12204106-12204478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 178
               

               
Conread position:
               
5-372
               

               
Cow position:
               
chr25:16064535-16064894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 73
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr25:9396092-9396452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
177, 114
               

               
Conread position:
               
5-380
               

               
Cow position:
               
chr25:27531628-27531270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
104, 21
               

               
Conread position:
               
6-191
               

               
Cow position:
               
chr25:30268007-30268190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
6-247
               

               
Cow position:
               
chr25:32848685-32848443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
171, 37
               

               
Conread position:
               
6-252
               

               
Cow position:
               
chr25:30621386-30621137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
112, 7
               

               
Conread position:
               
6-366
               

               
Cow position:
               
chr25:14834031-14833668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
5, 58
               

               
Conread position:
               
7-177
               

               
Cow position:
               
chr25:5555588-5555421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
5, 152
               

               
Conread position:
               
7-250
               

               
Cow position:
               
chr25:12840085-12840318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
172, 46
               

               
Conread position:
               
7-282
               

               
Cow position:
               
chr25:18236735-18236454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
8-109
               

               
Cow position:
               
chr25:35612693-35612592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
8-169
               

               
Cow position:
               
chr25:33263278-33263429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
8-169
               

               
Cow position:
               
chr25:36962351-36962188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
90, 125
               

               
Conread position:
               
8-171
               

               
Cow position:
               
chr25:14255202-14255358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
8-177
               

               
Cow position:
               
chr25:11315268-11315437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
14, 81
               

               
Conread position:
               
8-180
               

               
Cow position:
               
chr25:598972-599147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
8-180
               

               
Cow position:
               
chr25:9349617-9349445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
8-216
               

               
Cow position:
               
chr25:29802099-29801887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
8-242
               

               
Cow position:
               
chr25:4188416-4188175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
92, 72
               

               
Conread position:
               
8-294
               

               
Cow position:
               
chr25:37638013-37637725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
167, 20
               

               
Conread position:
               
8-298
               

               
Cow position:
               
chr25:2110724-2111007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 54
               

               
Conread position:
               
8-303
               

               
Cow position:
               
chr25:38972474-38972771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
167, 20
               

               
Conread position:
               
8-306
               

               
Cow position:
               
chr25:6740460-6740754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
171, 122
               

               
Conread position:
               
8-331
               

               
Cow position:
               
chr25:1735670-1735350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 92
               

               
Conread position:
               
8-345
               

               
Cow position:
               
chr25:14570006-14570352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
98, 208
               

               
Conread position:
               
8-357
               

               
Cow position:
               
chr25:40957346-40956995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 128
               

               
Conread position:
               
8-365
               

               
Cow position:
               
chr25:12824389-12824022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
91, 189
               

               
Conread position:
               
8-365
               

               
Cow position:
               
chr25:40321653-40321300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
72, 51
               

               
Conread position:
               
8-366
               

               
Cow position:
               
chr25:24572712-24573064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 176
               

               
Conread position:
               
8-378
               

               
Cow position:
               
chr25:10407778-10407410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 288
               

               
Conread position:
               
9-97
               

               
Cow position:
               
chr25:22297521-22297433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
89
               

               
Alignm identity:
               
76
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
9-105
               

               
Cow position:
               
chr25:27510617-27510522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
9-146
               

               
Cow position:
               
chr25:20790052-20789917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
9-263
               

               
Cow position:
               
chr25:9055846-9056085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
146, 99
               

               
Conread position:
               
9-263
               

               
Cow position:
               
chr25:17037097-17037356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
170, 198
               

               
Conread position:
               
9-277
               

               
Cow position:
               
chr25:6606717-6606449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
122, 200
               

               
Conread position:
               
9-316
               

               
Cow position:
               
chr25:18155237-18155547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 140
               

               
Conread position:
               
9-324
               

               
Cow position:
               
chr25:20394848-20395151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
171, 112
               

               
Conread position:
               
9-366
               

               
Cow position:
               
chr25:1837884-1838233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 81
               

               
Conread position:
               
10-208
               

               
Cow position:
               
chr25:13553555-13553756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
118, 132
               

               
Conread position:
               
10-262
               

               
Cow position:
               
chr25:30816468-30816726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 26
               

               
Conread position:
               
10-268
               

               
Cow position:
               
chr25:38910178-38910440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
169, 260
               

               
Conread position:
               
11-117
               

               
Cow position:
               
chr25:13566197-13566303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-177
               

               
Cow position:
               
chr25:13122585-13122749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
11-192
               

               
Cow position:
               
chr25:21562305-21562123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
168, 36
               

               
Conread position:
               
11-199
               

               
Cow position:
               
chr25:22549959-22549778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
155, 36
               

               
Conread position:
               
11-204
               

               
Cow position:
               
chr25:13412072-13412270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
11-204
               

               
Cow position:
               
chr25:14960057-14959862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
165, 100
               

               
Conread position:
               
11-224
               

               
Cow position:
               
chr25:6421408-6421195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
193, 175
               

               
Conread position:
               
11-253
               

               
Cow position:
               
chr25:9625453-9625698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
120, 33
               

               
Conread position:
               
11-254
               

               
Cow position:
               
chr25:35617781-35618024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
168, 23
               

               
Conread position:
               
11-260
               

               
Cow position:
               
chr25:6894137-6894378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
90, 52
               

               
Conread position:
               
11-276
               

               
Cow position:
               
chr25:13446277-13446007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
140, 127
               

               
Conread position:
               
11-277
               

               
Cow position:
               
chr25:6948416-6948144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
24, 118
               

               
Conread position:
               
11-281
               

               
Cow position:
               
chr25:36119845-36120114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 39
               

               
Conread position:
               
11-284
               

               
Cow position:
               
chr25:32899163-32898884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
48, 133
               

               
Conread position:
               
11-295
               

               
Cow position:
               
chr25:26238512-26238798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 207
               

               
Conread position:
               
11-362
               

               
Cow position:
               
chr25:5341294-5341647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 119
               

               
Conread position:
               
11-364
               

               
Cow position:
               
chr25:22530930-22531277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 198
               

               
Conread position:
               
11-366
               

               
Cow position:
               
chr25:11585156-11585514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 37
               

               
Conread position:
               
11-372
               

               
Cow position:
               
chr25:7386404-7386753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
169, 52
               

               
Conread position:
               
12-216
               

               
Cow position:
               
chr25:9532294-9532503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
119, 149
               

               
Conread position:
               
12-252
               

               
Cow position:
               
chr25:33025436-33025200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
167, 87
               

               
Conread position:
               
12-261
               

               
Cow position:
               
chr25:9842649-9842896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
119, 75
               

               
Conread position:
               
12-277
               

               
Cow position:
               
chr25:10698798-10699068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
132, 138
               

               
Conread position:
               
12-283
               

               
Cow position:
               
chr25:33256014-33256284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
47, 66
               

               
Conread position:
               
12-293
               

               
Cow position:
               
chr25:2414481-2414745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
248, 75
               

               
Conread position:
               
12-364
               

               
Cow position:
               
chr25:21191134-21191483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 79
               

               
Conread position:
               
12-364
               

               
Cow position:
               
chr25:23829465-23829134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
306, 44
               

               
Conread position:
               
12-369
               

               
Cow position:
               
chr25:25754351-25753999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 93
               

               
Conread position:
               
13-344
               

               
Cow position:
               
chr25:10137751-10138070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 79
               

               
Conread position:
               
14-164
               

               
Cow position:
               
chr25:10013739-10013589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
90, 118
               

               
Conread position:
               
14-205
               

               
Cow position:
               
chr25:25866581-25866772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
111, 79
               

               
Conread position:
               
14-306
               

               
Cow position:
               
chr25:41363493-41363210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
168, 54
               

               
Conread position:
               
14-378
               

               
Cow position:
               
chr25:23351042-23351404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 288
               

               
Conread position:
               
15-114
               

               
Cow position:
               
chr25:18935362-18935263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-197
               

               
Cow position:
               
chr25:31064821-31064994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
164, 69
               

               
Conread position:
               
19-125
               

               
Cow position:
               
chr25:16044933-16044827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-174
               

               
Cow position:
               
chr25:12807853-12807697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
20-247
               

               
Cow position:
               
chr25:20434207-20434432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
159, 71
               

               
Conread position:
               
20-248
               

               
Cow position:
               
chr25:35655214-35655442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
160, 143
               

               
Conread position:
               
20-337
               

               
Cow position:
               
chr25:38981759-38982074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
79, 116
               

               
Conread position:
               
20-366
               

               
Cow position:
               
chr25:10643656-10643313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 64
               

               
Conread position:
               
20-366
               

               
Cow position:
               
chr25:15694636-15694978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 21
               

               
Conread position:
               
21-306
               

               
Cow position:
               
chr25:13333076-13333363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
97, 89
               

               
Conread position:
               
22-261
               

               
Cow position:
               
chr25:31586694-31586934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
157, 185
               

               
Conread position:
               
22-269
               

               
Cow position:
               
chr25:15273344-15273590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
174, 123
               

               
Conread position:
               
23-201
               

               
Cow position:
               
chr25:8485877-8485698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
159, 68
               

               
Conread position:
               
24-278
               

               
Cow position:
               
chr25:17538757-17538497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
24-306
               

               
Cow position:
               
chr25:7445810-7446088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
155, 12
               

               
Conread position:
               
27-202
               

               
Cow position:
               
chr25:3969055-3969233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
28-306
               

               
Cow position:
               
chr25:17354039-17354317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
75, 157
               

               
Conread position:
               
29-146
               

               
Cow position:
               
chr25:6961516-6961401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
29-216
               

               
Cow position:
               
chr25:10212158-10212348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
150, 14
               

               
Conread position:
               
29-295
               

               
Cow position:
               
chr25:20625268-20625001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
147, 95
               

               
Conread position:
               
29-323
               

               
Cow position:
               
chr25:21245945-21245645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 101
               

               
Conread position:
               
29-382
               

               
Cow position:
               
chr25:13062518-13062874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
150, 275
               

               
Conread position:
               
30-178
               

               
Cow position:
               
chr25:33735284-33735432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
30-274
               

               
Cow position:
               
chr25:23738792-23738543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
30-298
               

               
Cow position:
               
chr25:26523641-26523895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
232, 140
               

               
Conread position:
               
31-306
               

               
Cow position:
               
chr25:41393001-41392721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
39, 236
               

               
Conread position:
               
32-366
               

               
Cow position:
               
chr25:9957370-9957042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 162
               

               
Conread position:
               
33-327
               

               
Cow position:
               
chr25:9634588-9634868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
223, 54
               

               
Conread position:
               
33-362
               

               
Cow position:
               
chr25:36037125-36036787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
67, 125
               

               
Conread position:
               
35-298
               

               
Cow position:
               
chr25:2498930-2499194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
145, 37
               

               
Conread position:
               
35-369
               

               
Cow position:
               
chr25:6803231-6803545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
218, 135
               

               
Conread position:
               
36-295
               

               
Cow position:
               
chr25:10637838-10637574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
39-174
               

               
Cow position:
               
chr25:20133739-20133610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
40-282
               

               
Cow position:
               
chr25:17418855-17419102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
41-282
               

               
Cow position:
               
chr25:12359223-12359465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
110, 80
               

               
Conread position:
               
41-282
               

               
Cow position:
               
chr25:16039166-16038922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
139, 227
               

               
Conread position:
               
42-282
               

               
Cow position:
               
chr25:29352251-29352005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
12, 108
               

               
Conread position:
               
42-366
               

               
Cow position:
               
chr25:6886294-6885975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
137, 53
               

               
Conread position:
               
44-282
               

               
Cow position:
               
chr25:9931749-9931993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
44-330
               

               
Cow position:
               
chr25:6424905-6424622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 35
               

               
Conread position:
               
44-371
               

               
Cow position:
               
chr25:9847462-9847789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
135, 31
               

               
Conread position:
               
45-292
               

               
Cow position:
               
chr25:17975690-17975443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
137, 163
               

               
Conread position:
               
46-138
               

               
Cow position:
               
chr25:24453313-24453405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
46-259
               

               
Cow position:
               
chr25:22910169-22909952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
54, 103
               

               
Conread position:
               
47-263
               

               
Cow position:
               
chr25:18073231-18073452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
47-277
               

               
Cow position:
               
chr25:16231445-16231213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
132, 46
               

               
Conread position:
               
47-307
               

               
Cow position:
               
chr25:20460810-20461066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
90, 41
               

               
Conread position:
               
48-369
               

               
Cow position:
               
chr25:12097522-12097839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
6, 49
               

               
Conread position:
               
49-219
               

               
Cow position:
               
chr25:22346331-22346498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
130, 22
               

               
Conread position:
               
49-283
               

               
Cow position:
               
chr25:27821091-27821331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
49-360
               

               
Cow position:
               
chr25:25051703-25051387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 180
               

               
Conread position:
               
50-219
               

               
Cow position:
               
chr25:9023327-9023499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
129, 98
               

               
Conread position:
               
50-295
               

               
Cow position:
               
chr25:7762929-7763179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
51-282
               

               
Cow position:
               
chr25:15391645-15391412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
100, 64
               

               
Conread position:
               
53-378
               

               
Cow position:
               
chr25:23053242-23053564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
129, 9
               

               
Conread position:
               
53-384
               

               
Cow position:
               
chr25:13708702-13709027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
196, 128
               

               
Conread position:
               
55-285
               

               
Cow position:
               
chr25:18968959-18969193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
131, 223
               

               
Conread position:
               
56-251
               

               
Cow position:
               
chr25:21961318-21961122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
126, 118
               

               
Conread position:
               
56-372
               

               
Cow position:
               
chr25:12817061-12817377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 74
               

               
Conread position:
               
59-267
               

               
Cow position:
               
chr25:15368367-15368579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 161
               

               
Conread position:
               
59-277
               

               
Cow position:
               
chr25:29561655-29561873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
121, 149
               

               
Conread position:
               
59-338
               

               
Cow position:
               
chr25:10366060-10365779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
49, 13
               

               
Conread position:
               
59-359
               

               
Cow position:
               
chr25:8347200-8347500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 149
               

               
Conread position:
               
59-382
               

               
Cow position:
               
chr25:16977494-16977814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
120, 77
               

               
Conread position:
               
61-224
               

               
Cow position:
               
chr25:10357705-10357540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
118, 7
               

               
Conread position:
               
61-268
               

               
Cow position:
               
chr25:15714574-15714784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
115, 192
               

               
Conread position:
               
62-253
               

               
Cow position:
               
chr25:25961656-25961850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
45, 158
               

               
Conread position:
               
63-306
               

               
Cow position:
               
chr25:16242274-16242032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
116, 148
               

               
Conread position:
               
64-282
               

               
Cow position:
               
chr25:14351994-14352217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
65-343
               

               
Cow position:
               
chr25:14196554-14196837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
67, 23
               

               
Conread position:
               
66-364
               

               
Cow position:
               
chr25:16319428-16319146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
116, 43
               

               
Conread position:
               
68-382
               

               
Cow position:
               
chr25:6474400-6474076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
44, 71
               

               
Conread position:
               
71-306
               

               
Cow position:
               
chr25:25948692-25948460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
108, 114
               

               
Conread position:
               
72-304
               

               
Cow position:
               
chr25:448641-448408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
110, 136
               

               
Conread position:
               
73-277
               

               
Cow position:
               
chr25:8133244-8133447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
176, 105
               

               
Conread position:
               
73-382
               

               
Cow position:
               
chr25:34618399-34618089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
106, 231
               

               
Conread position:
               
74-362
               

               
Cow position:
               
chr25:14117815-14118087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
108, 137
               

               
Conread position:
               
76-275
               

               
Cow position:
               
chr25:25783346-25783548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
103, 84
               

               
Conread position:
               
82-343
               

               
Cow position:
               
chr25:21895173-21894908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
21, 52
               

               
Conread position:
               
84-298
               

               
Cow position:
               
chr25:12195609-12195397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
174, 98
               

               
Conread position:
               
84-373
               

               
Cow position:
               
chr25:20348574-20348872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
98, 124
               

               
Conread position:
               
85-212
               

               
Cow position:
               
chr25:23920136-23920004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
85-267
               

               
Cow position:
               
chr25:10330677-10330500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
97, 61
               

               
Conread position:
               
85-366
               

               
Cow position:
               
chr25:20023682-20023390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
26, 172
               

               
Conread position:
               
86-295
               

               
Cow position:
               
chr25:3927759-3927974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
87-476
               

               
Cow position:
               
chr25:15412057-15411660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
19, 228
               

               
Conread position:
               
89-251
               

               
Cow position:
               
chr25:19366688-19366535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
90, 41
               

               
Conread position:
               
92-373
               

               
Cow position:
               
chr25:12261170-12260886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
90, 64
               

               
Conread position:
               
93-366
               

               
Cow position:
               
chr25:36081600-36081873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
89, 21
               

               
Conread position:
               
94-365
               

               
Cow position:
               
chr25:5572072-5571798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
110, 84
               

               
Conread position:
               
95-276
               

               
Cow position:
               
chr25:14266775-14266595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
84, 36
               

               
Conread position:
               
95-340
               

               
Cow position:
               
chr25:14512843-14513087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
101, 42
               

               
Conread position:
               
95-365
               

               
Cow position:
               
chr25:36535705-36535438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
87, 40
               

               
Conread position:
               
97-327
               

               
Cow position:
               
chr25:22297288-22297056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
165, 94
               

               
Conread position:
               
98-306
               

               
Cow position:
               
chr25:6003261-6003053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
84, 174
               

               
Conread position:
               
98-306
               

               
Cow position:
               
chr25:17702233-17702032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
54, 85
               

               
Conread position:
               
98-306
               

               
Cow position:
               
chr25:17712264-17712475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
84, 113
               

               
Conread position:
               
98-306
               

               
Cow position:
               
chr25:21266736-21266947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
71, 96
               

               
Conread position:
               
98-364
               

               
Cow position:
               
chr25:23917572-23917840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
81, 41
               

               
Conread position:
               
98-366
               

               
Cow position:
               
chr25:26700770-26701026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
86, 33
               

               
Conread position:
               
98-378
               

               
Cow position:
               
chr25:22203960-22203679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
84, 208
               

               
Conread position:
               
99-208
               

               
Cow position:
               
chr25:8961194-8961307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
99-278
               

               
Cow position:
               
chr25:18013131-18013314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
80, 31
               

               
Conread position:
               
99-283
               

               
Cow position:
               
chr25:18310532-18310720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 39
               

               
Conread position:
               
99-283
               

               
Cow position:
               
chr25:18935144-18934957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
38, 110
               

               
Conread position:
               
99-298
               

               
Cow position:
               
chr25:24168167-24167971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
80, 31
               

               
Conread position:
               
99-338
               

               
Cow position:
               
chr25:11131316-11131555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
78, 45
               

               
Conread position:
               
99-364
               

               
Cow position:
               
chr25:35332902-35333153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
8, 49
               

               
Conread position:
               
99-366
               

               
Cow position:
               
chr25:20785852-20785590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 34
               

               
Conread position:
               
101-331
               

               
Cow position:
               
chr25:13642583-13642345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
101-331
               

               
Cow position:
               
chr25:35625438-35625217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
81, 28
               

               
Conread position:
               
101-343
               

               
Cow position:
               
chr25:28188215-28187968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
81, 37
               

               
Conread position:
               
101-359
               

               
Cow position:
               
chr25:35344771-35345021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
78, 110
               

               
Conread position:
               
102-344
               

               
Cow position:
               
chr25:24452434-24452199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
73, 39
               

               
Conread position:
               
103-297
               

               
Cow position:
               
chr25:35612566-35612374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
45, 87
               

               
Conread position:
               
103-313
               

               
Cow position:
               
chr25:18988112-18988331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
79, 21
               

               
Conread position:
               
103-380
               

               
Cow position:
               
chr25:33691289-33691568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
76, 34
               

               
Conread position:
               
104-320
               

               
Cow position:
               
chr25:18075405-18075629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
77, 44
               

               
Conread position:
               
105-290
               

               
Cow position:
               
chr25:12117249-12117066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
76, 44
               

               
Conread position:
               
105-343
               

               
Cow position:
               
chr25:7306035-7306281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
74, 149
               

               
Conread position:
               
105-372
               

               
Cow position:
               
chr25:18487411-18487670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
109, 43
               

               
Conread position:
               
107-267
               

               
Cow position:
               
chr25:13566584-13566748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
75, 24
               

               
Conread position:
               
107-273
               

               
Cow position:
               
chr25:12778795-12778623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
30, 148
               

               
Conread position:
               
107-293
               

               
Cow position:
               
chr25:26058324-26058514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
107-331
               

               
Cow position:
               
chr25:9961439-9961204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
107-366
               

               
Cow position:
               
chr25:19679081-19679351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
75, 146
               

               
Conread position:
               
107-366
               

               
Cow position:
               
chr25:38957717-38957958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
72, 29
               

               
Conread position:
               
107-368
               

               
Cow position:
               
chr25:17566326-17566585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
146, 99
               

               
Conread position:
               
109-367
               

               
Cow position:
               
chr25:8918537-8918279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
70, 147
               

               
Conread position:
               
110-324
               

               
Cow position:
               
chr25:7581685-7581465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
110-327
               

               
Cow position:
               
chr25:16400507-16400300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
69, 6
               

               
Conread position:
               
110-339
               

               
Cow position:
               
chr25:16001779-16001550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
27, 82
               

               
Conread position:
               
111-295
               

               
Cow position:
               
chr25:15254588-15254406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
71, 100
               

               
Conread position:
               
114-324
               

               
Cow position:
               
chr25:36026753-36026968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
68, 94
               

               
Conread position:
               
115-258
               

               
Cow position:
               
chr25:10156338-10156479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 93
               

               
Conread position:
               
115-331
               

               
Cow position:
               
chr25:4002543-4002767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
64, 103
               

               
Conread position:
               
116-357
               

               
Cow position:
               
chr25:24669682-24669443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
80, 21
               

               
Conread position:
               
118-373
               

               
Cow position:
               
chr25:12294001-12293744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
64, 160
               

               
Conread position:
               
121-327
               

               
Cow position:
               
chr25:6256183-6255974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
55, 14
               

               
Conread position:
               
127-366
               

               
Cow position:
               
chr25:15377092-15377323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
136, 64
               

               
Conread position:
               
127-373
               

               
Cow position:
               
chr25:21289099-21289349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
55, 204
               

               
Conread position:
               
129-378
               

               
Cow position:
               
chr25:13380855-13380602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
50, 207
               

               
Conread position:
               
130-281
               

               
Cow position:
               
chr25:19478453-19478604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 17
               

               
Conread position:
               
131-366
               

               
Cow position:
               
chr25:7329307-7329545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
51, 122
               

               
Conread position:
               
132-331
               

               
Cow position:
               
chr25:61421-61625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
50, 79
               

               
Conread position:
               
141-372
               

               
Cow position:
               
chr25:10218278-10218047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
28, 199
               

               
Conread position:
               
147-374
               

               
Cow position:
               
chr25:12899534-12899762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
35, 16
               

               
Conread position:
               
149-364
               

               
Cow position:
               
chr25:26090034-26089818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
17, 62
               

               
Conread position:
               
163-366
               

               
Cow position:
               
chr25:18905680-18905881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
99, 174
               
Show alignments to all cow chromosomes.