Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rcol1026b_k12.5
        

               Conread position:
               1-162
               

               Cow position:
               chr1:3534962-3534798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               109, 42
               

               Conread position:
               1-203
               

               Cow position:
               chr1:47009119-47008922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               2-193
               

               Cow position:
               chr1:75250200-75250013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 28
               

               Conread position:
               6-206
               

               Cow position:
               chr1:51445971-51445765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               110, 27
               

               Conread position:
               14-197
               

               Cow position:
               chr1:72011732-72011912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               8, 102
               

               Conread position:
               23-194
               

               Cow position:
               chr1:89785980-89785811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               132, 35
               

               Conread position:
               23-204
               

               Cow position:
               chr1:43352585-43352769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               97, 51
               

               Conread position:
               23-226
               

               Cow position:
               chr1:33206809-33207006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               33, 61
               

               Conread position:
               24-197
               

               Cow position:
               chr1:102647204-102647375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               131, 7
               

               Conread position:
               25-193
               

               Cow position:
               chr1:55428886-55429054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               16, 5
               

               Conread position:
               25-197
               

               Cow position:
               chr1:69539760-69539594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               130, 89
               

               Conread position:
               25-203
               

               Cow position:
               chr1:41115649-41115824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               64, 5
               

               Conread position:
               26-221
               

               Cow position:
               chr1:45285730-45285529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               90, 5
               

               Conread position:
               30-165
               

               Cow position:
               chr1:40207055-40207192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               5, 93
               

               Conread position:
               30-168
               

               Cow position:
               chr1:68672536-68672674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               85, 11
               

               Conread position:
               30-197
               

               Cow position:
               chr1:49317430-49317599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               29, 11
               

               Conread position:
               30-197
               

               Cow position:
               chr1:92434066-92433897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               11, 65
               

               Conread position:
               30-203
               

               Cow position:
               chr1:4291230-4291051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               37, 11
               

               Conread position:
               30-203
               

               Cow position:
               chr1:88913385-88913209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               30-203
               

               Cow position:
               chr1:91066086-91066262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               30-203
               

               Cow position:
               chr1:101632271-101632448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               30-204
               

               Cow position:
               chr1:81580243-81580065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               11, 21
               

               Conread position:
               31-203
               

               Cow position:
               chr1:60281438-60281261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               10, 109
               

               Conread position:
               31-208
               

               Cow position:
               chr1:22448520-22448701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               85, 12
               

               Conread position:
               34-203
               

               Cow position:
               chr1:47969196-47969028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               121, 15
               

               Conread position:
               36-194
               

               Cow position:
               chr1:42482260-42482103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               119, 84
               

               Conread position:
               36-194
               

               Cow position:
               chr1:92989648-92989489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               36-203
               

               Cow position:
               chr1:92926785-92926623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               119, 79
               

               Conread position:
               37-193
               

               Cow position:
               chr1:35162467-35162310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               84, 77
               

               Conread position:
               37-193
               

               Cow position:
               chr1:88618653-88618497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               118, 123
               

               Conread position:
               37-194
               

               Cow position:
               chr1:45555423-45555264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               37-194
               

               Cow position:
               chr1:89076576-89076729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               118, 73
               

               Conread position:
               37-202
               

               Cow position:
               chr1:16961953-16962117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               111, 79
               

               Conread position:
               37-202
               

               Cow position:
               chr1:63390710-63390879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               37-203
               

               Cow position:
               chr1:635628-635794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               118, 86
               

               Conread position:
               37-203
               

               Cow position:
               chr1:31934564-31934403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               118, 83
               

               Conread position:
               37-205
               

               Cow position:
               chr1:41181902-41181733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               120, 95
               

               Conread position:
               37-205
               

               Cow position:
               chr1:68996238-68996071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               37, 15
               

               Conread position:
               37-207
               

               Cow position:
               chr1:57297539-57297361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               40-194
               

               Cow position:
               chr1:28177061-28176909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               115, 12
               

               Conread position:
               40-203
               

               Cow position:
               chr1:82337723-82337890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               87, 11
               

               Conread position:
               40-203
               

               Cow position:
               chr1:96365718-96365556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               81, 93
               

               Conread position:
               43-202
               

               Cow position:
               chr1:648376-648216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               72, 90
               

               Conread position:
               44-194
               

               Cow position:
               chr1:68618881-68619033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               23, 49
               

               Conread position:
               44-202
               

               Cow position:
               chr1:10655532-10655376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               112, 70
               

               Conread position:
               47-202
               

               Cow position:
               chr1:42398144-42398302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               47-203
               

               Cow position:
               chr1:4180574-4180730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               112, 68
               

               Conread position:
               47-203
               

               Cow position:
               chr1:27145604-27145759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               88, 68
               

               Conread position:
               47-203
               

               Cow position:
               chr1:40482365-40482512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               47-203
               

               Cow position:
               chr1:46030314-46030465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               109, 66
               

               Conread position:
               47-203
               

               Cow position:
               chr1:53520958-53520802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               108, 69
               

               Conread position:
               47-203
               

               Cow position:
               chr1:60032552-60032707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               108, 67
               

               Conread position:
               47-203
               

               Cow position:
               chr1:77683399-77683248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               108, 64
               

               Conread position:
               47-203
               

               Cow position:
               chr1:84240941-84240783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               13, 72
               

               Conread position:
               47-204
               

               Cow position:
               chr1:100421872-100421722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 67
               

               Conread position:
               47-205
               

               Cow position:
               chr1:7443023-7442870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               108, 42
               

               Conread position:
               47-206
               

               Cow position:
               chr1:85596985-85596829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               70, 24
               

               Conread position:
               47-209
               

               Cow position:
               chr1:74927931-74927768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               75, 125
               

               Conread position:
               48-193
               

               Cow position:
               chr1:97696793-97696643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               48-194
               

               Cow position:
               chr1:88652675-88652530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               73, 10
               

               Conread position:
               49-192
               

               Cow position:
               chr1:61542873-61543016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               106, 67
               

               Conread position:
               50-204
               

               Cow position:
               chr1:6941504-6941353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               8, 18
               

               Conread position:
               50-204
               

               Cow position:
               chr1:6958917-6958766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               8, 18
               

               Conread position:
               50-220
               

               Cow position:
               chr1:22943980-22944154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               51-186
               

               Cow position:
               chr1:72684740-72684604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               64, 70
               

               Conread position:
               51-191
               

               Cow position:
               chr1:87072739-87072600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               68, 24
               

               Conread position:
               51-194
               

               Cow position:
               chr1:74955974-74956121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               51-203
               

               Cow position:
               chr1:90641080-90640922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               51-203
               

               Cow position:
               chr1:99642326-99642475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               104, 32
               

               Conread position:
               51-204
               

               Cow position:
               chr1:95100997-95100850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               52-179
               

               Cow position:
               chr1:56832733-56832859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               103, 78
               

               Conread position:
               52-179
               

               Cow position:
               chr1:78079761-78079635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               103, 59
               

               Conread position:
               52-191
               

               Cow position:
               chr1:71665890-71666030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               63, 92
               

               Conread position:
               52-193
               

               Cow position:
               chr1:56719344-56719212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               52-193
               

               Cow position:
               chr1:61742419-61742559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               106, 56
               

               Conread position:
               52-193
               

               Cow position:
               chr1:89835295-89835150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               52-194
               

               Cow position:
               chr1:11226204-11226341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               103, 64
               

               Conread position:
               52-194
               

               Cow position:
               chr1:34300509-34300650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               103, 63
               

               Conread position:
               52-199
               

               Cow position:
               chr1:71350685-71350828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               52-201
               

               Cow position:
               chr1:96964358-96964213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               103, 10
               

               Conread position:
               52-202
               

               Cow position:
               chr1:22394845-22394687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               37, 71
               

               Conread position:
               52-202
               

               Cow position:
               chr1:79660360-79660510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               102, 78
               

               Conread position:
               52-203
               

               Cow position:
               chr1:2975952-2976103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               17, 43
               

               Conread position:
               52-203
               

               Cow position:
               chr1:9013581-9013430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               103, 78
               

               Conread position:
               52-203
               

               Cow position:
               chr1:25734910-25734759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               105, 82
               

               Conread position:
               52-203
               

               Cow position:
               chr1:30418006-30418147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               103, 22
               

               Conread position:
               52-203
               

               Cow position:
               chr1:57639473-57639631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               52-203
               

               Cow position:
               chr1:64804060-64804214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               63, 102
               

               Conread position:
               52-205
               

               Cow position:
               chr1:53374475-53374318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               63, 41
               

               Conread position:
               52-208
               

               Cow position:
               chr1:57395894-57396046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               105, 64
               

               Conread position:
               52-208
               

               Cow position:
               chr1:86113358-86113520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               59, 47
               

               Conread position:
               52-220
               

               Cow position:
               chr1:48581171-48581003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               105, 61
               

               Conread position:
               53-202
               

               Cow position:
               chr1:95558078-95557929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               102, 127
               

               Conread position:
               53-203
               

               Cow position:
               chr1:73561606-73561756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               66, 99
               

               Conread position:
               53-203
               

               Cow position:
               chr1:86073637-86073486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               72, 90
               

               Conread position:
               54-159
               

               Cow position:
               chr1:98576087-98575980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               68, 52
               

               Conread position:
               54-164
               

               Cow position:
               chr1:58037059-58036948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               54-197
               

               Cow position:
               chr1:23512619-23512758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               54-202
               

               Cow position:
               chr1:14308992-14309143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               54-202
               

               Cow position:
               chr1:26729758-26729614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               64, 112
               

               Conread position:
               54-202
               

               Cow position:
               chr1:92996851-92997004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               61, 93
               

               Conread position:
               54-203
               

               Cow position:
               chr1:6304824-6304972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               101, 62
               

               Conread position:
               54-203
               

               Cow position:
               chr1:15547511-15547361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               115, 51
               

               Conread position:
               54-203
               

               Cow position:
               chr1:26702163-26702316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               54-203
               

               Cow position:
               chr1:31348397-31348549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               69, 82
               

               Conread position:
               54-203
               

               Cow position:
               chr1:34159875-34159728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               101, 66
               

               Conread position:
               54-203
               

               Cow position:
               chr1:48444154-48444303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               101, 66
               

               Conread position:
               54-203
               

               Cow position:
               chr1:54156694-54156841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               101, 61
               

               Conread position:
               54-203
               

               Cow position:
               chr1:63434766-63434915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               101, 63
               

               Conread position:
               54-203
               

               Cow position:
               chr1:78809916-78809771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               101, 56
               

               Conread position:
               54-203
               

               Cow position:
               chr1:89485620-89485466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               54-203
               

               Cow position:
               chr1:90976048-90976194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               102, 61
               

               Conread position:
               54-203
               

               Cow position:
               chr1:97232000-97231851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               61, 81
               

               Conread position:
               54-204
               

               Cow position:
               chr1:76470693-76470545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               101, 20
               

               Conread position:
               54-205
               

               Cow position:
               chr1:78794191-78794338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               101, 60
               

               Conread position:
               54-205
               

               Cow position:
               chr1:82443414-82443569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               54-208
               

               Cow position:
               chr1:53370123-53369969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               61, 20
               

               Conread position:
               54-212
               

               Cow position:
               chr1:98413812-98413654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               65, 89
               

               Conread position:
               55-194
               

               Cow position:
               chr1:22823944-22823805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               60, 92
               

               Conread position:
               55-197
               

               Cow position:
               chr1:53425215-53425072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               81, 61
               

               Conread position:
               55-203
               

               Cow position:
               chr1:98360357-98360507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               66, 90
               

               Conread position:
               55-205
               

               Cow position:
               chr1:100770714-100770862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               100, 61
               

               Conread position:
               55-207
               

               Cow position:
               chr1:102266229-102266382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               64, 100
               

               Conread position:
               56-201
               

               Cow position:
               chr1:76222650-76222796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               64, 76
               

               Conread position:
               56-203
               

               Cow position:
               chr1:61284092-61283942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               44, 29
               

               Conread position:
               57-163
               

               Cow position:
               chr1:45223618-45223510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               57-166
               

               Cow position:
               chr1:25281620-25281733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               57-170
               

               Cow position:
               chr1:186237-186353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               57-171
               

               Cow position:
               chr1:37706933-37707051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               57-174
               

               Cow position:
               chr1:52995061-52994940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               57-178
               

               Cow position:
               chr1:8347160-8347039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               100, 59
               

               Conread position:
               57-182
               

               Cow position:
               chr1:100474271-100474143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               57-185
               

               Cow position:
               chr1:64302207-64302339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               57-188
               

               Cow position:
               chr1:71796273-71796408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               62, 102
               

               Conread position:
               57-190
               

               Cow position:
               chr1:45670672-45670542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               57-192
               

               Cow position:
               chr1:101946677-101946808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               96, 59
               

               Conread position:
               57-193
               

               Cow position:
               chr1:81868692-81868825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               57-193
               

               Cow position:
               chr1:95654676-95654811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               42, 30
               

               Conread position:
               57-194
               

               Cow position:
               chr1:1991382-1991521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               64, 22
               

               Conread position:
               57-194
               

               Cow position:
               chr1:24235482-24235617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               98, 59
               

               Conread position:
               57-194
               

               Cow position:
               chr1:42541635-42541496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               59, 73
               

               Conread position:
               57-194
               

               Cow position:
               chr1:44507010-44506868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               57-194
               

               Cow position:
               chr1:72068798-72068939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               57-197
               

               Cow position:
               chr1:10778600-10778463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               97, 59
               

               Conread position:
               57-197
               

               Cow position:
               chr1:20667705-20667845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               98, 60
               

               Conread position:
               57-197
               

               Cow position:
               chr1:43447792-43447935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               60, 10
               

               Conread position:
               57-197
               

               Cow position:
               chr1:52956295-52956150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               29, 25
               

               Conread position:
               57-197
               

               Cow position:
               chr1:59518959-59518817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               64, 114
               

               Conread position:
               57-197
               

               Cow position:
               chr1:68951664-68951524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               98, 68
               

               Conread position:
               57-197
               

               Cow position:
               chr1:79165045-79165188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               57-197
               

               Cow position:
               chr1:81228297-81228441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               58, 100
               

               Conread position:
               57-197
               

               Cow position:
               chr1:99609406-99609265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               62, 26
               

               Conread position:
               57-202
               

               Cow position:
               chr1:48769839-48769694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               98, 56
               

               Conread position:
               57-202
               

               Cow position:
               chr1:49433227-49433367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               98, 57
               

               Conread position:
               57-203
               

               Cow position:
               chr1:724777-724628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               42, 36
               

               Conread position:
               57-203
               

               Cow position:
               chr1:4032669-4032519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               57-203
               

               Cow position:
               chr1:6826259-6826398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               57-203
               

               Cow position:
               chr1:20950751-20950612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               98, 21
               

               Conread position:
               57-203
               

               Cow position:
               chr1:21787373-21787221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               57-203
               

               Cow position:
               chr1:24534217-24534363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               98, 63
               

               Conread position:
               57-203
               

               Cow position:
               chr1:36998222-36998086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               57-203
               

               Cow position:
               chr1:37309482-37309622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               57-203
               

               Cow position:
               chr1:42545742-42545895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               57-203
               

               Cow position:
               chr1:42555303-42555154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               57-203
               

               Cow position:
               chr1:43703446-43703298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               57-203
               

               Cow position:
               chr1:43872282-43872440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               57-203
               

               Cow position:
               chr1:44769072-44769222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               58, 26
               

               Conread position:
               57-203
               

               Cow position:
               chr1:45288834-45288981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               65, 59
               

               Conread position:
               57-203
               

               Cow position:
               chr1:45535744-45535596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               57-203
               

               Cow position:
               chr1:48730795-48730934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               98, 18
               

               Conread position:
               57-203
               

               Cow position:
               chr1:51394455-51394312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               67, 62
               

               Conread position:
               57-203
               

               Cow position:
               chr1:54199342-54199491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               57-203
               

               Cow position:
               chr1:54258604-54258455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               61, 97
               

               Conread position:
               57-203
               

               Cow position:
               chr1:54478366-54478215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               57-203
               

               Cow position:
               chr1:55146836-55146693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               98, 59
               

               Conread position:
               57-203
               

               Cow position:
               chr1:65318612-65318469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               98, 85
               

               Conread position:
               57-203
               

               Cow position:
               chr1:69694956-69695101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               98, 24
               

               Conread position:
               57-203
               

               Cow position:
               chr1:71045792-71045645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               59, 66
               

               Conread position:
               57-203
               

               Cow position:
               chr1:72813653-72813505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               63, 41
               

               Conread position:
               57-203
               

               Cow position:
               chr1:89741963-89742105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 79
               

               Conread position:
               57-203
               

               Cow position:
               chr1:90868404-90868550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               98, 59
               

               Conread position:
               57-203
               

               Cow position:
               chr1:93528734-93528589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               99, 15
               

               Conread position:
               57-203
               

               Cow position:
               chr1:93810466-93810320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               98, 56
               

               Conread position:
               57-203
               

               Cow position:
               chr1:94226518-94226661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               96, 18
               

               Conread position:
               57-203
               

               Cow position:
               chr1:100552007-100551860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               57-204
               

               Cow position:
               chr1:81355666-81355818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               6, 134
               

               Conread position:
               57-205
               

               Cow position:
               chr1:34771466-34771616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               66, 94
               

               Conread position:
               57-205
               

               Cow position:
               chr1:93554873-93554731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               98, 59
               

               Conread position:
               57-206
               

               Cow position:
               chr1:47790625-47790778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               57-206
               

               Cow position:
               chr1:50930939-50931090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               76, 22
               

               Conread position:
               57-206
               

               Cow position:
               chr1:72034887-72035038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               100, 41
               

               Conread position:
               57-206
               

               Cow position:
               chr1:85550041-85550192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               98, 64
               

               Conread position:
               57-206
               

               Cow position:
               chr1:98311107-98310954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               57-207
               

               Cow position:
               chr1:36932191-36932043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               100, 19
               

               Conread position:
               57-207
               

               Cow position:
               chr1:75142034-75141889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               98, 59
               

               Conread position:
               57-208
               

               Cow position:
               chr1:34856591-34856747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               57-214
               

               Cow position:
               chr1:98511964-98511806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               98, 57
               

               Conread position:
               58-197
               

               Cow position:
               chr1:6788247-6788389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               58-197
               

               Cow position:
               chr1:8984646-8984788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               26, 88
               

               Conread position:
               58-198
               

               Cow position:
               chr1:61723983-61724126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               58-198
               

               Cow position:
               chr1:102349710-102349858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               58-202
               

               Cow position:
               chr1:56477628-56477479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               58-202
               

               Cow position:
               chr1:96081516-96081378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               97, 63
               

               Conread position:
               58-203
               

               Cow position:
               chr1:9470362-9470507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               97, 67
               

               Conread position:
               58-203
               

               Cow position:
               chr1:19466089-19465947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               39, 43
               

               Conread position:
               58-203
               

               Cow position:
               chr1:20000712-20000860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               57, 107
               

               Conread position:
               58-203
               

               Cow position:
               chr1:26894940-26895085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               63, 97
               

               Conread position:
               58-203
               

               Cow position:
               chr1:52052681-52052830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               58-203
               

               Cow position:
               chr1:53308353-53308497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               62, 80
               

               Conread position:
               58-203
               

               Cow position:
               chr1:68763648-68763792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               97, 67
               

               Conread position:
               58-203
               

               Cow position:
               chr1:87936934-87936790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               96, 58
               

               Conread position:
               58-204
               

               Cow position:
               chr1:4374301-4374450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               57, 85
               

               Conread position:
               58-206
               

               Cow position:
               chr1:47886444-47886598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               58-209
               

               Cow position:
               chr1:13547949-13548099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               91, 72
               

               Conread position:
               59-203
               

               Cow position:
               chr1:22525913-22525767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               56, 120
               

               Conread position:
               59-203
               

               Cow position:
               chr1:28563531-28563676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               53, 97
               

               Conread position:
               59-203
               

               Cow position:
               chr1:39068921-39069064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               96, 61
               

               Conread position:
               59-203
               

               Cow position:
               chr1:57263957-57264105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               59-203
               

               Cow position:
               chr1:57635497-57635352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               59-203
               

               Cow position:
               chr1:79278411-79278556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               59-209
               

               Cow position:
               chr1:771789-771940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               59-209
               

               Cow position:
               chr1:3323903-3323752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               59, 90
               

               Conread position:
               60-177
               

               Cow position:
               chr1:42868902-42869022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               60-185
               

               Cow position:
               chr1:82880680-82880553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               60-194
               

               Cow position:
               chr1:55135865-55135733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               95, 60
               

               Conread position:
               60-194
               

               Cow position:
               chr1:55819092-55818961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               60-197
               

               Cow position:
               chr1:5580095-5579951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               60-200
               

               Cow position:
               chr1:56635132-56634989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               60, 37
               

               Conread position:
               60-203
               

               Cow position:
               chr1:3751904-3752046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               95, 105
               

               Conread position:
               60-203
               

               Cow position:
               chr1:8349284-8349424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               60-203
               

               Cow position:
               chr1:31234897-31235036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               60-203
               

               Cow position:
               chr1:32001279-32001430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               60-203
               

               Cow position:
               chr1:43340579-43340721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               58, 69
               

               Conread position:
               60-203
               

               Cow position:
               chr1:68826870-68827014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               60-203
               

               Cow position:
               chr1:74084154-74084306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               60-203
               

               Cow position:
               chr1:93228559-93228417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               95, 61
               

               Conread position:
               60-203
               

               Cow position:
               chr1:101822472-101822610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               60-203
               

               Cow position:
               chr1:101834853-101834715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               60-204
               

               Cow position:
               chr1:76019659-76019805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               52, 138
               

               Conread position:
               60-206
               

               Cow position:
               chr1:24777955-24778100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               95, 50
               

               Conread position:
               60-210
               

               Cow position:
               chr1:71716544-71716391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               63, 9
               

               Conread position:
               61-191
               

               Cow position:
               chr1:30189186-30189049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               61-197
               

               Cow position:
               chr1:81471166-81471029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               54, 37
               

               Conread position:
               61-201
               

               Cow position:
               chr1:77880697-77880843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               58, 88
               

               Conread position:
               62-202
               

               Cow position:
               chr1:18936802-18936937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               58, 36
               

               Conread position:
               62-203
               

               Cow position:
               chr1:100817586-100817446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               93, 57
               

               Conread position:
               62-205
               

               Cow position:
               chr1:53622990-53622847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               136, 60
               

               Conread position:
               62-207
               

               Cow position:
               chr1:86061953-86062099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               91, 54
               

               Conread position:
               62-208
               

               Cow position:
               chr1:43822435-43822285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               63-193
               

               Cow position:
               chr1:3137957-3137830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               92, 45
               

               Conread position:
               63-194
               

               Cow position:
               chr1:3243967-3243838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               92, 48
               

               Conread position:
               63-194
               

               Cow position:
               chr1:24445596-24445728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               63-203
               

               Cow position:
               chr1:82505007-82504865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               92, 59
               

               Conread position:
               63-206
               

               Cow position:
               chr1:51684838-51684686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               64-197
               

               Cow position:
               chr1:84239079-84239216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               64-203
               

               Cow position:
               chr1:3352668-3352803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               59, 48
               

               Conread position:
               64-203
               

               Cow position:
               chr1:69264840-69264707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               65-197
               

               Cow position:
               chr1:91811811-91811684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               51, 58
               

               Conread position:
               65-203
               

               Cow position:
               chr1:6961937-6961799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               90, 51
               

               Conread position:
               65-203
               

               Cow position:
               chr1:61391755-61391898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               65-203
               

               Cow position:
               chr1:64421360-64421226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 90
               

               Conread position:
               66-194
               

               Cow position:
               chr1:67578330-67578200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               66-202
               

               Cow position:
               chr1:38544436-38544571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               89, 47
               

               Conread position:
               67-192
               

               Cow position:
               chr1:65103648-65103521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               54, 79
               

               Conread position:
               68-203
               

               Cow position:
               chr1:24655984-24655854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               68-212
               

               Cow position:
               chr1:32788157-32788297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               58, 87
               

               Conread position:
               72-197
               

               Cow position:
               chr1:70291591-70291466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               83, 93
               

               Conread position:
               72-197
               

               Cow position:
               chr1:81638427-81638302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               83, 92
               

               Conread position:
               72-203
               

               Cow position:
               chr1:666388-666256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               72-203
               

               Cow position:
               chr1:33811952-33811820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               46, 72
               

               Conread position:
               72-215
               

               Cow position:
               chr1:47883795-47883941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               83, 48
               

               Conread position:
               72-224
               

               Cow position:
               chr1:80942570-80942416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               74-200
               

               Cow position:
               chr1:44836203-44836329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               48, 69
               

               Conread position:
               74-203
               

               Cow position:
               chr1:64962647-64962776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               41, 70
               

               Conread position:
               75-197
               

               Cow position:
               chr1:56674107-56674229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               80, 102
               

               Conread position:
               75-202
               

               Cow position:
               chr1:3955460-3955584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               40, 95
               

               Conread position:
               75-203
               

               Cow position:
               chr1:10952207-10952338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               75-203
               

               Cow position:
               chr1:63905455-63905581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               80, 41
               

               Conread position:
               75-203
               

               Cow position:
               chr1:100706150-100706024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               80, 41
               

               Conread position:
               75-212
               

               Cow position:
               chr1:43855320-43855182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               44, 26
               

               Conread position:
               76-202
               

               Cow position:
               chr1:34686206-34686083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               79, 26
               

               Conread position:
               76-203
               

               Cow position:
               chr1:3776601-3776721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               79, 32
               

               Conread position:
               77-205
               

               Cow position:
               chr1:29900948-29901084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               34, 99
               

               Conread position:
               78-206
               

               Cow position:
               chr1:72105428-72105298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               79-194
               

               Cow position:
               chr1:71818446-71818558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               97
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               76, 37
               

               Conread position:
               80-203
               

               Cow position:
               chr1:11873347-11873470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               82-202
               

               Cow position:
               chr1:89437926-89438047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               73, 56
               

               Conread position:
               83-203
               

               Cow position:
               chr1:4294068-4293946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               83-205
               

               Cow position:
               chr1:56658044-56657923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               72, 108
               

               Conread position:
               85-197
               

               Cow position:
               chr1:75967440-75967328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               70, 37
               

               Conread position:
               90-211
               

               Cow position:
               chr1:34000915-34000795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               67, 26
               

               Conread position:
               91-209
               

               Cow position:
               chr1:91142153-91142269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               65, 29
               

               Conread position:
               102-203
               

               Cow position:
               chr1:65909522-65909418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               88
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               109-206
               

               Cow position:
               chr1:90595566-90595666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               86
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               110-202
               

               Cow position:
               chr1:73536724-73536630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               81
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               12, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-162
Cow position:	chr1:3534962-3534798 (view UCSC Genome Browser custom track)
Alignm length:	167
Alignm identity:	124
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	109, 42
Conread position:	1-203
Cow position:	chr1:47009119-47008922 (view UCSC Genome Browser custom track)
Alignm length:	208
Alignm identity:	152
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	30, 43
Conread position:	2-193
Cow position:	chr1:75250200-75250013 (view UCSC Genome Browser custom track)
Alignm length:	198
Alignm identity:	145
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	8, 28
Conread position:	6-206
Cow position:	chr1:51445971-51445765 (view UCSC Genome Browser custom track)
Alignm length:	212
Alignm identity:	152
Alignm E-value:	7e-23
Alignm gaps (pig, cow):	110, 27
Conread position:	14-197
Cow position:	chr1:72011732-72011912 (view UCSC Genome Browser custom track)
Alignm length:	186
Alignm identity:	132
Alignm E-value:	7e-23
Alignm gaps (pig, cow):	8, 102
Conread position:	23-194
Cow position:	chr1:89785980-89785811 (view UCSC Genome Browser custom track)
Alignm length:	173
Alignm identity:	124
Alignm E-value:	7e-23
Alignm gaps (pig, cow):	132, 35
Conread position:	23-204
Cow position:	chr1:43352585-43352769 (view UCSC Genome Browser custom track)
Alignm length:	187
Alignm identity:	135
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	97, 51
Conread position:	23-226
Cow position:	chr1:33206809-33207006 (view UCSC Genome Browser custom track)
Alignm length:	208
Alignm identity:	151
Alignm E-value:	9e-26
Alignm gaps (pig, cow):	33, 61
Conread position:	24-197
Cow position:	chr1:102647204-102647375 (view UCSC Genome Browser custom track)
Alignm length:	176
Alignm identity:	137
Alignm E-value:	6e-32
Alignm gaps (pig, cow):	131, 7
Conread position:	25-193
Cow position:	chr1:55428886-55429054 (view UCSC Genome Browser custom track)
Alignm length:	174
Alignm identity:	133
Alignm E-value:	9e-26
Alignm gaps (pig, cow):	16, 5
Conread position:	25-197
Cow position:	chr1:69539760-69539594 (view UCSC Genome Browser custom track)
Alignm length:	174
Alignm identity:	129
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	130, 89
Conread position:	25-203
Cow position:	chr1:41115649-41115824 (view UCSC Genome Browser custom track)
Alignm length:	181
Alignm identity:	135
Alignm E-value:	4e-27
Alignm gaps (pig, cow):	64, 5
Conread position:	26-221
Cow position:	chr1:45285730-45285529 (view UCSC Genome Browser custom track)
Alignm length:	204
Alignm identity:	150
Alignm E-value:	4e-28
Alignm gaps (pig, cow):	90, 5
Conread position:	30-165
Cow position:	chr1:40207055-40207192 (view UCSC Genome Browser custom track)
Alignm length:	139
Alignm identity:	107
Alignm E-value:	7e-23
Alignm gaps (pig, cow):	5, 93
Conread position:	30-168
Cow position:	chr1:68672536-68672674 (view UCSC Genome Browser custom track)
Alignm length:	142
Alignm identity:	108
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	85, 11
Conread position:	30-197
Cow position:	chr1:49317430-49317599 (view UCSC Genome Browser custom track)
Alignm length:	172
Alignm identity:	129
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	29, 11
Conread position:	30-203
Cow position:	chr1:4291230-4291051 (view UCSC Genome Browser custom track)
Alignm length:	181
Alignm identity:	138
Alignm E-value:	5e-30
Alignm gaps (pig, cow):	37, 11
Conread position:	30-204
Cow position:	chr1:81580243-81580065 (view UCSC Genome Browser custom track)
Alignm length:	186
Alignm identity:	139
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	11, 21
Conread position:	31-203
Cow position:	chr1:60281438-60281261 (view UCSC Genome Browser custom track)
Alignm length:	179
Alignm identity:	129
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	10, 109
Conread position:	31-208
Cow position:	chr1:22448520-22448701 (view UCSC Genome Browser custom track)
Alignm length:	184
Alignm identity:	142
Alignm E-value:	6e-32
Alignm gaps (pig, cow):	85, 12